Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_O07
         (696 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0232 + 21130122-21130454,21130895-21131053,21131424-211315...    33   0.29 
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420...    30   1.5  
01_06_0695 - 31292622-31293317                                         28   6.2  
08_02_0104 + 12404890-12405129,12405244-12405333,12405953-124060...    28   8.1  

>02_04_0232 +
           21130122-21130454,21130895-21131053,21131424-21131582,
           21132420-21132512,21133321-21133437,21133623-21133697,
           21133878-21134104,21134200-21135073
          Length = 678

 Score = 32.7 bits (71), Expect = 0.29
 Identities = 17/43 (39%), Positives = 20/43 (46%)
 Frame = +1

Query: 91  PSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSID 219
           PS TP  ER  S+D   PR     Y   R+RD    K+  S D
Sbjct: 365 PSDTPHLERSQSSDRRRPRSSDPRYTPSRTRDEDAHKQHSSRD 407


>07_01_0566 +
           4207894-4207974,4208090-4208144,4208671-4208759,
           4209742-4209794,4209966-4210120,4210201-4210528,
           4210618-4210730,4211394-4211538,4211951-4212259,
           4212340-4212420,4212989-4213349
          Length = 589

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 24/88 (27%), Positives = 31/88 (35%)
 Frame = +1

Query: 64  NRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSIDLRDPNGLR 243
           +RS+  A       R   +S  D   P HR    P  R R     K  D    R P+   
Sbjct: 501 SRSRSPAEHQRRDVRNRLRSGRDGGGPDHRNSSPPVNRGRSRSRSKSRDPSKSRSPDAPA 560

Query: 244 RRVSRFECETRLVKSHCLEPPDSRGLXS 327
           ++ S      R   S    P  S+GL S
Sbjct: 561 KKGSSKYNRRRSSSSRSSSPAGSKGLVS 588


>01_06_0695 - 31292622-31293317
          Length = 231

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 16/45 (35%), Positives = 18/45 (40%)
 Frame = +1

Query: 43  PGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLR 177
           P     L   Q D   PS++      SST  S P HR  L P  R
Sbjct: 3   PSTKQLLPMPQQDPNSPSSSTSSSSSSSTSPSHPHHRAPLPPSPR 47


>08_02_0104 +
           12404890-12405129,12405244-12405333,12405953-12406036,
           12406888-12407132,12409032-12409095,12409270-12409968,
           12410063-12410176,12410287-12410418,12410594-12410770,
           12411085-12411138,12411230-12411292,12411396-12412307,
           12412408-12412535,12413680-12413962
          Length = 1094

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 19/61 (31%), Positives = 26/61 (42%)
 Frame = +1

Query: 37  ESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSI 216
           +SPG  L   R  HD +L         KSST  +  R   E      SR     +KT+S+
Sbjct: 734 DSPGDSL---RDVHDISLNLKLSLDSEKSSTKENSVRRNLEDAVQKLSRGVSANRKTESV 790

Query: 217 D 219
           +
Sbjct: 791 E 791


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,726,893
Number of Sequences: 37544
Number of extensions: 197821
Number of successful extensions: 641
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 641
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)