Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_O04
         (793 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0846 - 21983581-21986055                                         31   1.4  
05_04_0396 - 20934444-20934969,20935042-20935316,20935447-20935581     29   3.2  
01_06_0806 - 32123513-32123905                                         29   5.6  
01_06_0695 - 31292622-31293317                                         29   5.6  
07_03_1086 + 23858419-23859423,23859527-23859610                       28   7.4  
06_03_1055 - 27234824-27234838,27236087-27236125,27236322-272373...    28   7.4  
03_05_0951 + 29093962-29094373,29095291-29095388,29095689-290960...    28   7.4  
02_04_0232 + 21130122-21130454,21130895-21131053,21131424-211315...    28   9.8  

>07_03_0846 - 21983581-21986055
          Length = 824

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 20/57 (35%), Positives = 28/57 (49%)
 Frame = +3

Query: 180 KNFSDSIDLRDPNGLRRRVSRFECETRLVKSHXLEPPDSRGSTVSISLPDSARLASA 350
           + F    DL+D  G  +R    +C+T    S     PD   S VS+ LPD+A+ A A
Sbjct: 319 QKFQSDWDLQDFTGGCKRNVPLQCQTN--SSSAQTQPDKFYSMVSVRLPDNAQSAVA 373


>05_04_0396 - 20934444-20934969,20935042-20935316,20935447-20935581
          Length = 311

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -1

Query: 430 GHLVHALGR-AAGGAKLPSAGLCLNASKAEASLA 332
           G LV  L R   GG    SAG+C   S+ +ASLA
Sbjct: 203 GRLVETLARDGGGGGGAYSAGVCFYGSRMDASLA 236


>01_06_0806 - 32123513-32123905
          Length = 130

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = +3

Query: 87  PRQERKS-STNYSEPRHRTELYPDLRSRDARVKNFSDSIDLRDPNGL 224
           P Q R +  TN   PRH ++ YP L  RD   + +     +RD  G+
Sbjct: 29  PYQARYAIPTNNDLPRHGSDTYPSLTCRDTPPRCWDMDPPVRDTGGV 75


>01_06_0695 - 31292622-31293317
          Length = 231

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 16/45 (35%), Positives = 19/45 (42%)
 Frame = +3

Query: 27  PGAGLSLNRSQHDAALPSTTPRQERKSSTNYSEPRHRTELYPDLR 161
           P     L   Q D   PS++      SST+ S P HR  L P  R
Sbjct: 3   PSTKQLLPMPQQDPNSPSSSTSSSSSSSTSPSHPHHRAPLPPSPR 47


>07_03_1086 + 23858419-23859423,23859527-23859610
          Length = 362

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
 Frame = -1

Query: 472 CDSNTAQYERNRSFGHLVHALGRAAGGAKLPSAGLCLNA-----SKAEASLAESGKDMLT 308
           CD N A      +   LVHAL  AA  A   +A   L         A AS+  +G   L 
Sbjct: 135 CDENKAIIVEAGAIRPLVHALKSAASPAARENAACALLRLSQLDGSAAASIGRAGAIPLL 194

Query: 307 VEPRESGGSK 278
           V   E+GG++
Sbjct: 195 VSLLETGGAR 204


>06_03_1055 -
           27234824-27234838,27236087-27236125,27236322-27237388,
           27237422-27237630,27237650-27238053
          Length = 577

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 15/45 (33%), Positives = 26/45 (57%)
 Frame = -1

Query: 343 ASLAESGKDMLTVEPRESGGSKXCDFTSRVSHSKRETRRRSPFGS 209
           A+ A +GK +   E  E   S+ CD T  + +S RE ++R+P+ +
Sbjct: 430 AAAAAAGKPISEHEAIEHLWSRQCDLTEILQNSSRE-KKRNPYAA 473


>03_05_0951 +
           29093962-29094373,29095291-29095388,29095689-29096087,
           29096999-29097724,29097802-29097968,29098046-29098311,
           29098396-29098581,29099072-29099346,29099435-29099683
          Length = 925

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
 Frame = -1

Query: 352 KAEASLAESGKDMLTVEP-RESGGSKXCDFTSRVSHSKRETR-RRSPFGSRRSMLSEKFL 179
           K+ AS A  G D     P R  GG K     S  + SKR  + R + F     +L    L
Sbjct: 4   KSSASAAHQGGDAPAEAPRRRGGGGKRKSGGSSFTPSKRHAKERNAAFHVPPHLLHSGPL 63

Query: 178 TRASR 164
           TRA+R
Sbjct: 64  TRAAR 68


>02_04_0232 +
           21130122-21130454,21130895-21131053,21131424-21131582,
           21132420-21132512,21133321-21133437,21133623-21133697,
           21133878-21134104,21134200-21135073
          Length = 678

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 75  PSTTPRQERKSSTNYSEPRHRTELYPDLRSRD 170
           PS TP  ER  S++   PR     Y   R+RD
Sbjct: 365 PSDTPHLERSQSSDRRRPRSSDPRYTPSRTRD 396


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,543,647
Number of Sequences: 37544
Number of extensions: 392738
Number of successful extensions: 1108
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1108
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)