Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_O03
(819 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB8E5.06c |rpl302|rpl3-2, rpl3-b|60S ribosomal protein L3|Sch... 131 1e-31
SPAC17A5.03 |rpl301|rpl3-1, rpl3|60S ribosomal protein L3 |Schiz... 131 1e-31
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 30 0.45
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 0.60
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 29 0.79
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 29 0.79
SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca... 29 0.79
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 1.0
SPBC21.02 |||TLDc domain protein 2|Schizosaccharomyces pombe|chr... 27 2.4
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 27 3.2
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 5.6
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 26 7.4
SPCC63.04 |mok14||alpha-1,3-glucan synthase Mok14|Schizosaccharo... 25 9.8
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 25 9.8
SPBC32H8.13c |mok12||alpha-1,3-glucan synthase Mok12|Schizosacch... 25 9.8
>SPAPB8E5.06c |rpl302|rpl3-2, rpl3-b|60S ribosomal protein
L3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 388
Score = 131 bits (316), Expect = 1e-31
Identities = 74/138 (53%), Positives = 89/138 (64%)
Frame = -3
Query: 604 WHTKNXTPVRTQQGSLGKVACIXGLGIXXRVSFTVARAGQKGYHXRTEMNKXIYRIGQGI 425
W TK P +T +G L KVACI G V +TVARAG GY RT++N IYRIG G
Sbjct: 233 WGTKRL-PRKTHRG-LRKVACI-GAWHPANVQWTVARAGNAGYMHRTQLNSKIYRIGAG- 288
Query: 424 HKKDGKVIKNNASXEYDLSEKSITPMGGFPHYGEVNNDFVVIKGCCMGPKKRIITLRKSL 245
D K NAS ++D +EK ITPMGGF YG V NDFV++ G GP KR++TLRKSL
Sbjct: 289 --DDAK----NASTDFDATEKRITPMGGFVRYGVVENDFVMLNGATPGPVKRVLTLRKSL 342
Query: 244 RVHTKRAALEKINLKFID 191
HT R ALE ++LK+ID
Sbjct: 343 LTHTSRKALEPVSLKWID 360
Score = 31.5 bits (68), Expect = 0.15
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = -1
Query: 186 SSKFGHGRFQTPA 148
+SKFGHGRFQTPA
Sbjct: 362 ASKFGHGRFQTPA 374
>SPAC17A5.03 |rpl301|rpl3-1, rpl3|60S ribosomal protein L3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 388
Score = 131 bits (316), Expect = 1e-31
Identities = 74/138 (53%), Positives = 89/138 (64%)
Frame = -3
Query: 604 WHTKNXTPVRTQQGSLGKVACIXGLGIXXRVSFTVARAGQKGYHXRTEMNKXIYRIGQGI 425
W TK P +T +G L KVACI G V +TVARAG GY RT++N IYRIG G
Sbjct: 233 WGTKRL-PRKTHRG-LRKVACI-GAWHPANVQWTVARAGNAGYMHRTQLNSKIYRIGAG- 288
Query: 424 HKKDGKVIKNNASXEYDLSEKSITPMGGFPHYGEVNNDFVVIKGCCMGPKKRIITLRKSL 245
D K NAS ++D +EK ITPMGGF YG V NDFV++ G GP KR++TLRKSL
Sbjct: 289 --DDAK----NASTDFDATEKRITPMGGFVRYGVVENDFVMLNGATPGPVKRVLTLRKSL 342
Query: 244 RVHTKRAALEKINLKFID 191
HT R ALE ++LK+ID
Sbjct: 343 LTHTSRKALEPVSLKWID 360
Score = 31.5 bits (68), Expect = 0.15
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = -1
Query: 186 SSKFGHGRFQTPA 148
+SKFGHGRFQTPA
Sbjct: 362 ASKFGHGRFQTPA 374
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 29.9 bits (64), Expect = 0.45
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +1
Query: 691 PNPPXXXVPPKXPXXPISTXXPPKGXPGXAWPSPXXPPP 807
P P +P P + PP PG A P PPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 28.3 bits (60), Expect = 1.4
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +1
Query: 691 PNPPXXXVPPKXPXXPISTXXPPKGXPGXAWPSPXXPPP 807
P P VPP P PP A P P PPP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.5 bits (63), Expect = 0.60
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +1
Query: 700 PXXXVPPKXPXXPISTXXPPKGXPGXAWPSPXXPPP 807
P P P P+S PP P A P PPP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 29.1 bits (62), Expect = 0.79
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -2
Query: 764 PFGGXKVEMGXXGXFGGTXXXGGLGXWPQGW 672
PFG VE G G G GGLG P W
Sbjct: 1526 PFGLVAVEFGRKGTLGIGAKVGGLGQMPGWW 1556
>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
Mok13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2358
Score = 29.1 bits (62), Expect = 0.79
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -2
Query: 764 PFGGXKVEMGXXGXFGGTXXXGGLGXWPQGW 672
PFG VE G G G GGLG P W
Sbjct: 1523 PFGLVAVEFGRKGALGIGARVGGLGQMPGWW 1553
>SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan
synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 2410
Score = 29.1 bits (62), Expect = 0.79
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -2
Query: 764 PFGGXKVEMGXXGXFGGTXXXGGLGXWPQGW 672
PFG VE G G G GGLG P W
Sbjct: 1527 PFGLVAVEFGRKGALGIGARVGGLGQMPGWW 1557
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.7 bits (61), Expect = 1.0
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +1
Query: 700 PXXXVPPKXPXXPISTXXPPKGXPGXAWPSPXXPPPXXRP 819
P VP P PI T PP P + +P PPP P
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPP--VPKSSSGAPSAPPPVPAP 1069
>SPBC21.02 |||TLDc domain protein 2|Schizosaccharomyces pombe|chr
2|||Manual
Length = 511
Score = 27.5 bits (58), Expect = 2.4
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -1
Query: 156 TPAXQGCIHGYTQEGSYSRRSCGYHNPS 73
T + HGY+ + R+ C YHNPS
Sbjct: 299 TSLFRASFHGYSMY-ALERKMCNYHNPS 325
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 27.1 bits (57), Expect = 3.2
Identities = 19/55 (34%), Positives = 20/55 (36%), Gaps = 9/55 (16%)
Frame = +1
Query: 670 FXPWGQXPNPPXXXVPPKXPXXPI---------STXXPPKGXPGXAWPSPXXPPP 807
F P P PP PP P PI + PP PG A P P P P
Sbjct: 485 FIPGTSAPLPPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALP-PGMPAP 538
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.2 bits (55), Expect = 5.6
Identities = 14/48 (29%), Positives = 15/48 (31%)
Frame = +1
Query: 676 PWGQXPNPPXXXVPPKXPXXPISTXXPPKGXPGXAWPSPXXPPPXXRP 819
P N P P P S P P + PS PPP P
Sbjct: 148 PSASGVNAPTVSAPNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPPPP 195
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 25.8 bits (54), Expect = 7.4
Identities = 19/54 (35%), Positives = 20/54 (37%)
Frame = -2
Query: 818 GRXXGGGXXGEGQA*PGXPFGGXKVEMGXXGXFGGTXXXGGLGXWPQGWX*VXW 657
G GG G + PG GG G G FGG GG G P G W
Sbjct: 222 GHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGG--GPGGFGGGPGGHGGPGW 273
>SPCC63.04 |mok14||alpha-1,3-glucan synthase
Mok14|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1369
Score = 25.4 bits (53), Expect = 9.8
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -2
Query: 764 PFGGXKVEMGXXGXFGGTXXXGGLGXWPQGW 672
PFG VE G G GGLG P W
Sbjct: 637 PFGLVAVEFGRRGAICIGSRVGGLGEMPGWW 667
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 25.4 bits (53), Expect = 9.8
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +1
Query: 697 PPXXXVPPKXPXXPISTXXPPKGXPGXAWPSPXXPPP 807
P PP P P S PP+ P + P+P PP
Sbjct: 224 PTSTSAPPIPPSIPSSR--PPERVPSLSAPAPPPIPP 258
>SPBC32H8.13c |mok12||alpha-1,3-glucan synthase
Mok12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2352
Score = 25.4 bits (53), Expect = 9.8
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -2
Query: 764 PFGGXKVEMGXXGXFGGTXXXGGLGXWPQGW 672
PFG VE G G GGLG P W
Sbjct: 1554 PFGLVAVEFGRKGVLCIGSRTGGLGHMPGWW 1584
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,868,662
Number of Sequences: 5004
Number of extensions: 54004
Number of successful extensions: 144
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 140
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 400438000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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