Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_O03
(819 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 160 1e-39
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 160 1e-39
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 160 1e-39
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 160 1e-39
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 160 1e-39
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 160 1e-39
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 160 1e-39
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 160 1e-39
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 38 0.007
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 38 0.007
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.32
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.32
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.32
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 31 1.3
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 30 1.7
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 30 2.3
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 29 3.0
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 29 3.0
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 29 3.0
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 29 3.0
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 4.0
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 29 5.3
AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical ... 28 7.0
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 7.0
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 7.0
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 7.0
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 28 9.2
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 28 9.2
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 28 9.2
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 160 bits (389), Expect = 1e-39
Identities = 82/138 (59%), Positives = 102/138 (73%)
Frame = -3
Query: 604 WHTKNXTPVRTQQGSLGKVACIXGLGIXXRVSFTVARAGQKGYHXRTEMNKXIYRIGQGI 425
WHTK P +T +G L KVACI G RV+FTVARAGQKG+H RT +N IYRIG+
Sbjct: 235 WHTKKL-PRKTHKG-LRKVACI-GAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSA 291
Query: 424 HKKDGKVIKNNASXEYDLSEKSITPMGGFPHYGEVNNDFVVIKGCCMGPKKRIITLRKSL 245
++GK NN S E+DL++K+ITPMGGFP YG VN D+++++G +GPKKR+ITLRKSL
Sbjct: 292 LTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSL 348
Query: 244 RVHTKRAALEKINLKFID 191
TKR A EKINLK+ID
Sbjct: 349 ITQTKRVAHEKINLKWID 366
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 160 bits (389), Expect = 1e-39
Identities = 82/138 (59%), Positives = 102/138 (73%)
Frame = -3
Query: 604 WHTKNXTPVRTQQGSLGKVACIXGLGIXXRVSFTVARAGQKGYHXRTEMNKXIYRIGQGI 425
WHTK P +T +G L KVACI G RV+FTVARAGQKG+H RT +N IYRIG+
Sbjct: 235 WHTKKL-PRKTHKG-LRKVACI-GAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSA 291
Query: 424 HKKDGKVIKNNASXEYDLSEKSITPMGGFPHYGEVNNDFVVIKGCCMGPKKRIITLRKSL 245
++GK NN S E+DL++K+ITPMGGFP YG VN D+++++G +GPKKR+ITLRKSL
Sbjct: 292 LTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSL 348
Query: 244 RVHTKRAALEKINLKFID 191
TKR A EKINLK+ID
Sbjct: 349 ITQTKRVAHEKINLKWID 366
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 160 bits (389), Expect = 1e-39
Identities = 82/138 (59%), Positives = 102/138 (73%)
Frame = -3
Query: 604 WHTKNXTPVRTQQGSLGKVACIXGLGIXXRVSFTVARAGQKGYHXRTEMNKXIYRIGQGI 425
WHTK P +T +G L KVACI G RV+FTVARAGQKG+H RT +N IYRIG+
Sbjct: 137 WHTKKL-PRKTHKG-LRKVACI-GAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSA 193
Query: 424 HKKDGKVIKNNASXEYDLSEKSITPMGGFPHYGEVNNDFVVIKGCCMGPKKRIITLRKSL 245
++GK NN S E+DL++K+ITPMGGFP YG VN D+++++G +GPKKR+ITLRKSL
Sbjct: 194 LTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSL 250
Query: 244 RVHTKRAALEKINLKFID 191
TKR A EKINLK+ID
Sbjct: 251 ITQTKRVAHEKINLKWID 268
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 160 bits (389), Expect = 1e-39
Identities = 82/138 (59%), Positives = 102/138 (73%)
Frame = -3
Query: 604 WHTKNXTPVRTQQGSLGKVACIXGLGIXXRVSFTVARAGQKGYHXRTEMNKXIYRIGQGI 425
WHTK P +T +G L KVACI G RV+FTVARAGQKG+H RT +N IYRIG+
Sbjct: 187 WHTKKL-PRKTHKG-LRKVACI-GAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSA 243
Query: 424 HKKDGKVIKNNASXEYDLSEKSITPMGGFPHYGEVNNDFVVIKGCCMGPKKRIITLRKSL 245
++GK NN S E+DL++K+ITPMGGFP YG VN D+++++G +GPKKR+ITLRKSL
Sbjct: 244 LTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSL 300
Query: 244 RVHTKRAALEKINLKFID 191
TKR A EKINLK+ID
Sbjct: 301 ITQTKRVAHEKINLKWID 318
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 160 bits (389), Expect = 1e-39
Identities = 82/138 (59%), Positives = 102/138 (73%)
Frame = -3
Query: 604 WHTKNXTPVRTQQGSLGKVACIXGLGIXXRVSFTVARAGQKGYHXRTEMNKXIYRIGQGI 425
WHTK P +T +G L KVACI G RV+FTVARAGQKG+H RT +N IYRIG+
Sbjct: 235 WHTKKL-PRKTHKG-LRKVACI-GAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSA 291
Query: 424 HKKDGKVIKNNASXEYDLSEKSITPMGGFPHYGEVNNDFVVIKGCCMGPKKRIITLRKSL 245
++GK NN S E+DL++K+ITPMGGFP YG VN D+++++G +GPKKR+ITLRKSL
Sbjct: 292 LTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSL 348
Query: 244 RVHTKRAALEKINLKFID 191
TKR A EKINLK+ID
Sbjct: 349 ITQTKRVAHEKINLKWID 366
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 160 bits (389), Expect = 1e-39
Identities = 82/138 (59%), Positives = 102/138 (73%)
Frame = -3
Query: 604 WHTKNXTPVRTQQGSLGKVACIXGLGIXXRVSFTVARAGQKGYHXRTEMNKXIYRIGQGI 425
WHTK P +T +G L KVACI G RV+FTVARAGQKG+H RT +N IYRIG+
Sbjct: 137 WHTKKL-PRKTHKG-LRKVACI-GAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSA 193
Query: 424 HKKDGKVIKNNASXEYDLSEKSITPMGGFPHYGEVNNDFVVIKGCCMGPKKRIITLRKSL 245
++GK NN S E+DL++K+ITPMGGFP YG VN D+++++G +GPKKR+ITLRKSL
Sbjct: 194 LTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSL 250
Query: 244 RVHTKRAALEKINLKFID 191
TKR A EKINLK+ID
Sbjct: 251 ITQTKRVAHEKINLKWID 268
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 160 bits (389), Expect = 1e-39
Identities = 82/138 (59%), Positives = 102/138 (73%)
Frame = -3
Query: 604 WHTKNXTPVRTQQGSLGKVACIXGLGIXXRVSFTVARAGQKGYHXRTEMNKXIYRIGQGI 425
WHTK P +T +G L KVACI G RV+FTVARAGQKG+H RT +N IYRIG+
Sbjct: 187 WHTKKL-PRKTHKG-LRKVACI-GAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSA 243
Query: 424 HKKDGKVIKNNASXEYDLSEKSITPMGGFPHYGEVNNDFVVIKGCCMGPKKRIITLRKSL 245
++GK NN S E+DL++K+ITPMGGFP YG VN D+++++G +GPKKR+ITLRKSL
Sbjct: 244 LTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSL 300
Query: 244 RVHTKRAALEKINLKFID 191
TKR A EKINLK+ID
Sbjct: 301 ITQTKRVAHEKINLKWID 318
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 160 bits (389), Expect = 1e-39
Identities = 82/138 (59%), Positives = 102/138 (73%)
Frame = -3
Query: 604 WHTKNXTPVRTQQGSLGKVACIXGLGIXXRVSFTVARAGQKGYHXRTEMNKXIYRIGQGI 425
WHTK P +T +G L KVACI G RV+FTVARAGQKG+H RT +N IYRIG+
Sbjct: 235 WHTKKL-PRKTHKG-LRKVACI-GAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSA 291
Query: 424 HKKDGKVIKNNASXEYDLSEKSITPMGGFPHYGEVNNDFVVIKGCCMGPKKRIITLRKSL 245
++GK NN S E+DL++K+ITPMGGFP YG VN D+++++G +GPKKR+ITLRKSL
Sbjct: 292 LTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSL 348
Query: 244 RVHTKRAALEKINLKFID 191
TKR A EKINLK+ID
Sbjct: 349 ITQTKRVAHEKINLKWID 366
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 38.3 bits (85), Expect = 0.007
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +1
Query: 691 PNPPXXXVPPKXPXXPISTXXPPKGXPGXAWPSPXXPPPXXRP 819
P P +PP P P T PP WP P PPP P
Sbjct: 266 PPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTP 308
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/52 (34%), Positives = 21/52 (40%), Gaps = 5/52 (9%)
Frame = +1
Query: 676 PWGQXPNPPXXX-VPPKXPXX----PISTXXPPKGXPGXAWPSPXXPPPXXR 816
P G+ P PP +PP P P PP PG +P PPP R
Sbjct: 303 PPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPR 354
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 38.3 bits (85), Expect = 0.007
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +1
Query: 691 PNPPXXXVPPKXPXXPISTXXPPKGXPGXAWPSPXXPPPXXRP 819
P P +PP P P T PP WP P PPP P
Sbjct: 276 PPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTP 318
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/52 (34%), Positives = 21/52 (40%), Gaps = 5/52 (9%)
Frame = +1
Query: 676 PWGQXPNPPXXX-VPPKXPXX----PISTXXPPKGXPGXAWPSPXXPPPXXR 816
P G+ P PP +PP P P PP PG +P PPP R
Sbjct: 313 PPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPR 364
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.7 bits (71), Expect = 0.32
Identities = 22/72 (30%), Positives = 23/72 (31%), Gaps = 1/72 (1%)
Frame = +1
Query: 607 HQXDPLCXLCPXXDXXXXXTXFXPWGQXPNPPXXXVPPKXP-XXPISTXXPPKGXPGXAW 783
H DP L P G PP PP P PI+ PP PG
Sbjct: 677 HINDPKIPLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLP 736
Query: 784 PSPXXPPPXXRP 819
P PPP P
Sbjct: 737 PITGGPPPPPPP 748
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +1
Query: 691 PNPPXXXVPPKXPXXPISTXXPPKGXPGXAWPSPXXPPP 807
P PP PP PIS PP P P P PPP
Sbjct: 742 PPPP----PPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +1
Query: 682 GQXPNPPXXXVPPKXPXXPISTXXPPKGXPGXAW-PSPXXPPPXXRP 819
G P PP +PP P PP G P + P P PPP P
Sbjct: 725 GPPPPPPPGGLPPITGGPP--PPPPPGGLPPISGGPPPPPPPPGGCP 769
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +1
Query: 682 GQXPNPPXXXVPPKXPXXPISTXXPPKGXPGXAWPSPXXPPP 807
G P PP +PP P PP G P P P PPP
Sbjct: 741 GPPPPPPPGGLPP-ISGGPPPPPPPPGGCP----PPPPPPPP 777
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.7 bits (71), Expect = 0.32
Identities = 22/72 (30%), Positives = 23/72 (31%), Gaps = 1/72 (1%)
Frame = +1
Query: 607 HQXDPLCXLCPXXDXXXXXTXFXPWGQXPNPPXXXVPPKXP-XXPISTXXPPKGXPGXAW 783
H DP L P G PP PP P PI+ PP PG
Sbjct: 677 HINDPKIPLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLP 736
Query: 784 PSPXXPPPXXRP 819
P PPP P
Sbjct: 737 PITGGPPPPPPP 748
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +1
Query: 691 PNPPXXXVPPKXPXXPISTXXPPKGXPGXAWPSPXXPPP 807
P PP PP PIS PP P P P PPP
Sbjct: 742 PPPP----PPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +1
Query: 682 GQXPNPPXXXVPPKXPXXPISTXXPPKGXPGXAW-PSPXXPPPXXRP 819
G P PP +PP P PP G P + P P PPP P
Sbjct: 725 GPPPPPPPGGLPPITGGPP--PPPPPGGLPPISGGPPPPPPPPGGCP 769
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +1
Query: 682 GQXPNPPXXXVPPKXPXXPISTXXPPKGXPGXAWPSPXXPPP 807
G P PP +PP P PP G P P P PPP
Sbjct: 741 GPPPPPPPGGLPP-ISGGPPPPPPPPGGCP----PPPPPPPP 777
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.7 bits (71), Expect = 0.32
Identities = 22/72 (30%), Positives = 23/72 (31%), Gaps = 1/72 (1%)
Frame = +1
Query: 607 HQXDPLCXLCPXXDXXXXXTXFXPWGQXPNPPXXXVPPKXP-XXPISTXXPPKGXPGXAW 783
H DP L P G PP PP P PI+ PP PG
Sbjct: 260 HINDPKIPLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLP 319
Query: 784 PSPXXPPPXXRP 819
P PPP P
Sbjct: 320 PITGGPPPPPPP 331
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +1
Query: 691 PNPPXXXVPPKXPXXPISTXXPPKGXPGXAWPSPXXPPP 807
P PP PP PIS PP P P P PPP
Sbjct: 325 PPPP----PPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 359
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +1
Query: 682 GQXPNPPXXXVPPKXPXXPISTXXPPKGXPGXAW-PSPXXPPPXXRP 819
G P PP +PP P PP G P + P P PPP P
Sbjct: 308 GPPPPPPPGGLPPITGGPP--PPPPPGGLPPISGGPPPPPPPPGGCP 352
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +1
Query: 682 GQXPNPPXXXVPPKXPXXPISTXXPPKGXPGXAWPSPXXPPP 807
G P PP +PP P PP G P P P PPP
Sbjct: 324 GPPPPPPPGGLPP-ISGGPPPPPPPPGGCP----PPPPPPPP 360
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/48 (41%), Positives = 22/48 (45%), Gaps = 6/48 (12%)
Frame = +1
Query: 682 GQXPNPPXXXVPPKXPXXPISTXXPPKGX-PGXA-----WPSPXXPPP 807
G PNPP PP P+ST PP PG A P+P PPP
Sbjct: 498 GHAPNPPPP--PPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPPPP 543
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +1
Query: 691 PNPPXXXVPPKXPXXPISTXXPPKGXPGXAWPSPXXPPP 807
P PP PP P P P P P P PPP
Sbjct: 32 PPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPP 70
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = +1
Query: 691 PNPPXXXVPPKXPXXPISTXXPPKGXPGXAWPSPXXPPPXXRP 819
P PP PP+ P PP P P P P P P
Sbjct: 44 PCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYSP 86
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = -2
Query: 818 GRXXGGGXXGEGQA*PGXPFGGXKVEMGXXGXFGGTXXXGGLG 690
G GGG G+G+ PG GG G G GG GG G
Sbjct: 134 GGRGGGGRGGDGRGPPGSNGGGDWGGNGGGGRGGGGGRGGGGG 176
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = -2
Query: 806 GGGXXGEGQA*PGXPFGGXKV--EMGXXGXFGGTXXXGGLG 690
GGG G G+ G FGG + G G FGG+ G G
Sbjct: 815 GGGFGGTGRGRGGGVFGGGGRGGDFGGSGNFGGSGGGGSFG 855
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/45 (42%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = -2
Query: 818 GRXXGGGXXGEGQA*PGXPFGGXKV--EMGXXGXFGGTXXXGGLG 690
GR GGG G G G FGG G G FGG+ GG G
Sbjct: 822 GRGRGGGVFGGGGR--GGDFGGSGNFGGSGGGGSFGGSGGGGGFG 864
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = +1
Query: 676 PWGQXPNPPXXXVPPKXPXXPISTXXPPKGXPGXAWPSPXXPPP 807
P G P P PP P+ PP+G PG P PPP
Sbjct: 760 PSGPSPVPRPAPAPPGGRQAPM----PPRGGPGAPPPPGMRPPP 799
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = +1
Query: 676 PWGQXPNPPXXXVPPKXPXXPISTXXPPKGXPGXAWPSPXXPPP 807
P G P P PP P+ PP+G PG P PPP
Sbjct: 760 PSGPSPVPRPAPAPPGGRQAPM----PPRGGPGAPPPPGMRPPP 799
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = +1
Query: 676 PWGQXPNPPXXXVPPKXPXXPISTXXPPKGXPGXAWPSPXXPPP 807
P G P P PP P+ PP+G PG P PPP
Sbjct: 760 PSGPSPVPRPAPAPPGGRQAPM----PPRGGPGAPPPPGMRPPP 799
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = +1
Query: 676 PWGQXPNPPXXXVPPKXPXXPISTXXPPKGXPGXAWPSPXXPPP 807
P G PN P P P P P G P WPSP P P
Sbjct: 1004 PSGPSPNGPSPNGPS--PNGPSPNGPSPNG-PTPNWPSPNGPSP 1044
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = +1
Query: 676 PWGQXPNPPXXXVPPKXPXXPISTXXPPKGXPGXAWPSPXXPPP 807
P G P P PP P+ PP+G PG P PPP
Sbjct: 760 PSGPSPVPRPAPAPPGGRQAPM----PPRGGPGAPPPPGMRPPP 799
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = +1
Query: 691 PNPPXXXVPPKXPXXPISTXXPPKGXPGXAWPSPXXPPPXXRP 819
P+P PP P P P G P P P PP P
Sbjct: 238 PSPSDPPGPPGPPGPPTRRPPGPPGPPTRRPPGPPGPPTRRPP 280
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 691 PNPPXXXVPPKXPXXPISTXXPPKGXPG 774
P PP PP P P S+ P+G PG
Sbjct: 261 PGPPGPIGPPGQPGAPGSSQPGPQGPPG 288
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +1
Query: 685 QXPNPPXXXVPPKXPXXPISTXXPPKGXPGXAWPSPXXPP 804
+ P P PP P PI P G PG + P P PP
Sbjct: 250 EVPGTPGPAGPP-GPPGPIGPPGQP-GAPGSSQPGPQGPP 287
>AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical
protein Y44E3A.4 protein.
Length = 511
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +1
Query: 694 NPPXXXVPPKXPXXPISTXXPPKGXPGXAWPSPXXPPP 807
NPP VPPK IS PP A PS P P
Sbjct: 282 NPPQPAVPPK--PAKISVADPPPSTIAPAAPSAPAPAP 317
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/44 (34%), Positives = 17/44 (38%)
Frame = +1
Query: 676 PWGQXPNPPXXXVPPKXPXXPISTXXPPKGXPGXAWPSPXXPPP 807
P G P PP PP PP+G P P+ PPP
Sbjct: 276 PTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP----PTGSLPPP 315
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/44 (34%), Positives = 17/44 (38%)
Frame = +1
Query: 676 PWGQXPNPPXXXVPPKXPXXPISTXXPPKGXPGXAWPSPXXPPP 807
P G P PP PP PP+G P P+ PPP
Sbjct: 297 PTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP----PTGSLPPP 336
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/44 (34%), Positives = 17/44 (38%)
Frame = +1
Query: 676 PWGQXPNPPXXXVPPKXPXXPISTXXPPKGXPGXAWPSPXXPPP 807
P G P PP PP PP+G P P+ PPP
Sbjct: 282 PTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP----PTGSLPPP 321
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 27.9 bits (59), Expect = 9.2
Identities = 18/56 (32%), Positives = 21/56 (37%)
Frame = -2
Query: 818 GRXXGGGXXGEGQA*PGXPFGGXKVEMGXXGXFGGTXXXGGLGXWPQGWX*VXWXW 651
G GG G G G GG + G +GG GG G W +G W W
Sbjct: 219 GGSQGGSQGGWGNQ--GGQQGGGRGGQQGPGGWGGGGRGGGWGGWGRG---SRWGW 269
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 3/46 (6%)
Frame = +1
Query: 691 PNPPXXXVPPKXPXXPISTXXPPK---GXPGXAWPSPXXPPPXXRP 819
P P V P P P PP P P P PPP RP
Sbjct: 46 PMPMPMPVCPPPPPCPAQFCPPPPICPPPPPPPMPCPPPPPPMPRP 91
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/49 (32%), Positives = 17/49 (34%), Gaps = 1/49 (2%)
Frame = +1
Query: 676 PWGQXPNPPXXXVPPKXPXXPISTXXPP-KGXPGXAWPSPXXPPPXXRP 819
PW + PP PP P PP P P P PPP P
Sbjct: 43 PWHRNRGPPPFGPPPPWDRPPPPWRRPPWHRRPPWGLP-PPPPPPEPEP 90
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,596,638
Number of Sequences: 27780
Number of extensions: 348600
Number of successful extensions: 1197
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1102
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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