Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_O01
(879 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 48 2e-06
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 39 8e-04
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 33 0.071
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.16
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.16
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 31 0.16
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 31 0.22
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 2.7
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 26 6.1
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 47.6 bits (108), Expect = 2e-06
Identities = 45/186 (24%), Positives = 49/186 (26%), Gaps = 4/186 (2%)
Frame = +3
Query: 321 PXXPRPPXHPXXXXXPXPXGRXXPXTXPXPPRAXGSDXXPRPSPXXRGGXXGPPPXPXXX 500
P P PP P G P PP + P P +G PPP P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPP-QGRSAPPPPPPRSA 369
Query: 501 PTXXPXXPPXVXPXAXXXXXXXXXXXXXXXXXXXXXXERPKRPXXNPXP-PXNXPPXQXP 677
P+ PP A R P P P + PP P
Sbjct: 370 PSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPP 429
Query: 678 LXPXPXPXG--RXXXXXXPXPPXXXXAPX-PXGXXPXPPXPQKPPP*XPXXKXXGXAXTT 848
P P P PP AP P G PP P P P A
Sbjct: 430 SLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAPVA 489
Query: 849 VXAPLP 866
A LP
Sbjct: 490 SIAELP 495
Score = 34.3 bits (75), Expect = 0.023
Identities = 28/129 (21%), Positives = 31/129 (24%)
Frame = +2
Query: 320 PXXPPXXXAPXTXXXPXPXRKXXSGXXAXPPXSXXQRXXPPXKPXXAXGXXXATPXSXKX 499
P PP AP T P P + P P P +TP
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTP 420
Query: 500 SDQXPXXTPRGXXXSPPHXXXPPXDXXQPPXXXXXXXXXXXXXXXKPPXPXQXPPTTXPP 679
P P +PP P PP P P PP
Sbjct: 421 PSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP--APPP 478
Query: 680 XPXPXPXRP 706
P P P P
Sbjct: 479 APAPAPAAP 487
Score = 32.7 bits (71), Expect = 0.071
Identities = 34/162 (20%), Positives = 38/162 (23%)
Frame = +3
Query: 321 PXXPRPPXHPXXXXXPXPXGRXXPXTXPXPPRAXGSDXXPRPSPXXRGGXXGPPPXPXXX 500
P P P P R + P PP P PS PP P
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERVPSLSAPAPP------PIPPPSNGTVSSPPNSPPRPIAP 277
Query: 501 PTXXPXXPPXVXPXAXXXXXXXXXXXXXXXXXXXXXXERPKRPXXNPXPPXNXPPXQXPL 680
+ P P P R PP L
Sbjct: 278 VSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGK-PPIGNGSSNSSL 336
Query: 681 XPXPXPXGRXXXXXXPXPPXXXXAPXPXGXXPXPPXPQKPPP 806
P P P P PP AP P P ++PPP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 31.9 bits (69), Expect = 0.12
Identities = 47/242 (19%), Positives = 55/242 (22%)
Frame = +1
Query: 139 PPIXXXSLGAFXKPPXXXXPPXFXGFXNPXHKXEGGGXHHPXXPKTNPNTXCXGXQNPTX 318
PPI S G PP P NP P + + + P
Sbjct: 254 PPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPP 313
Query: 319 PPXXPXXRGTPHXQXPQXXXEDXXRXPSPPPXEXXAATXXPXQAXXRXGGXXGHPPIXXX 498
PP P R + P PPP AA P G PP
Sbjct: 314 PP--PPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQ----GRSAPPP---- 363
Query: 499 XRPXPXXXPPXSXXXPPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPPHXXPP 678
P P P PP TPP PP
Sbjct: 364 --PPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPP 421
Query: 679 SXXPQXXXAXXXXXXXPPPRXXPGPXAXXGXXPPXPPPRSXPPXXXPXXXGXRRXPQSXX 858
S P + P P P PP + P P P +
Sbjct: 422 SLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPA 481
Query: 859 PS 864
P+
Sbjct: 482 PA 483
Score = 28.7 bits (61), Expect = 1.2
Identities = 23/87 (26%), Positives = 25/87 (28%)
Frame = +3
Query: 618 PKRPXXNPXPPXNXPPXQXPLXPXPXPXGRXXXXXXPXPPXXXXAPXPXGXXPXPPXPQK 797
P P N PP P P P P PP P P P +
Sbjct: 340 PPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQP-PPLSSSRAVSNPPAPPPAIPGR 398
Query: 798 PPP*XPXXKXXGXAXTTVXAPLPXPXS 878
P P G A T P+P P S
Sbjct: 399 SAPALPPL---GNASRTSTPPVPTPPS 422
Score = 28.7 bits (61), Expect = 1.2
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = +3
Query: 309 PHXPPXXPRPPXHPXXXXXPXPXGRXXPXTXPXPPRAXGSDXXPRPSP 452
P PP P P P P P G P P PP A P P+P
Sbjct: 444 PAAPPLPPSAPIAP-----PLPAGM--PAAPPLPPAAPAPPPAPAPAP 484
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 39.1 bits (87), Expect = 8e-04
Identities = 51/245 (20%), Positives = 57/245 (23%), Gaps = 2/245 (0%)
Frame = +1
Query: 136 APPIXXXSLGAFXKPPXXXXPPXFXGFXNPXHKXEGGGXHHPXXPKTNPNTXCXGXQNPT 315
APP+ S A P PP P G P P++ P+
Sbjct: 1021 APPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPS 1080
Query: 316 XPPXXPXXRGTPHXQXPQXXXEDXXRXPSPPPXEXXAATXXPXQAXXRXGGXXGHPPIXX 495
P P G P P P P P P A PP+
Sbjct: 1081 GAPPVPAPSGIPPVPKP-----SVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPV 1135
Query: 496 XXRPXPXXXPPXSXXXPPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPPHXXP 675
P P S PP P P P
Sbjct: 1136 PSGAPP--VPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP 1193
Query: 676 PSXXPQXXXAXXXXXXXPPPRXXPGPXAXXGXXPPXP-PPRSXPPXXXPXXXGXR-RXPQ 849
PS P PPP P PP P P PP P P+
Sbjct: 1194 PSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPR 1253
Query: 850 SXXPS 864
S PS
Sbjct: 1254 SSVPS 1258
Score = 39.1 bits (87), Expect = 8e-04
Identities = 45/222 (20%), Positives = 51/222 (22%), Gaps = 3/222 (1%)
Frame = +3
Query: 222 PPXQKXGGGXTXXXXXXXXXXXXMXGVTKPHXPPXXPRPPXHPXXXXXPXPXGRXXPXTX 401
PP K G + + P P P P P P P P
Sbjct: 1050 PPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPV---PKPSVAAPPVPK 1106
Query: 402 PX---PPRAXGSDXXPRPSPXXRGGXXGPPPXPXXXPTXXPXXPPXVXPXAXXXXXXXXX 572
P PP S P P P P P PP P
Sbjct: 1107 PSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSV 1166
Query: 573 XXXXXXXXXXXXXERPKRPXXNPXPPXNXPPXQXPLXPXPXPXGRXXXXXXPXPPXXXXA 752
PK P PP P P P P P
Sbjct: 1167 AAPPVPAPSSGIPPVPK-------PAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPV 1219
Query: 753 PXPXGXXPXPPXPQKPPP*XPXXKXXGXAXTTVXAPLPXPXS 878
P P P P P P P + +T + +P P S
Sbjct: 1220 PTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVPSPHS 1261
Score = 32.7 bits (71), Expect = 0.071
Identities = 22/86 (25%), Positives = 24/86 (27%), Gaps = 1/86 (1%)
Frame = +3
Query: 618 PKRPXXNPXPPXNXPPXQXPLXPXPXPXGRXXXXXXPXPPXXXXAPXPXGXXPXP-PXPQ 794
P P PP P P P P P P P P G P P P
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVA 1100
Query: 795 KPPP*XPXXKXXGXAXTTVXAPLPXP 872
PP P + P+P P
Sbjct: 1101 APPVPKPSVAVPPVPAPSGAPPVPKP 1126
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 32.7 bits (71), Expect = 0.071
Identities = 19/56 (33%), Positives = 19/56 (33%)
Frame = +3
Query: 336 PPXHPXXXXXPXPXGRXXPXTXPXPPRAXGSDXXPRPSPXXRGGXXGPPPXPXXXP 503
PP P P P P P PP A P P P GPPP P P
Sbjct: 732 PPPPPPAVIVPTPA----PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 30.7 bits (66), Expect = 0.29
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +2
Query: 638 PPXPXQXPPTTXPPXPXPXPXRPXXPXXPXXPPXEXXGPXPXRGXXXPXXPPEA 799
PP P PT P P P P P P PP G P PP A
Sbjct: 734 PPPPAVIVPT---PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPA 784
Score = 29.5 bits (63), Expect = 0.66
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = +2
Query: 638 PPXPXQXPPTTXPPXPXPXPXRPXXPXXPXXPPXEXXGPXPXRGXXXPXXPPEAXP 805
PP P PP P P P P P P P P P P PP P
Sbjct: 732 PPPP---PPAVIVPTPAPAPI-PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.1 bits (57), Expect = 3.5
Identities = 21/70 (30%), Positives = 22/70 (31%), Gaps = 5/70 (7%)
Frame = +3
Query: 309 PHXPPX--XPRPPXHPXXXXXPXPXGRXXPXTXPXPPRAXGSDXXPRPSP---XXRGGXX 473
P PP P P P P P P P PP G+ P P P GG
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPI-MGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSR 791
Query: 474 GPPPXPXXXP 503
P P P
Sbjct: 792 YYAPAPQAEP 801
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/49 (28%), Positives = 15/49 (30%)
Frame = +3
Query: 660 PPXQXPLXPXPXPXGRXXXXXXPXPPXXXXAPXPXGXXPXPPXPQKPPP 806
PP + P P P P P P G P P PPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 26.6 bits (56), Expect = 4.7
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = +3
Query: 390 PXTXPXPPRAXGSDXXPRPSPXXRGGXXGPPPXPXXXPTXXPXXPP 527
P P A P P+P GG PPP P P PP
Sbjct: 736 PPAVIVPTPAPAPIPVPPPAP-IMGGPPPPPPPPGVAGAGPPPPPP 780
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.5 bits (68), Expect = 0.16
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +2
Query: 647 PXQXPPTTXPPXPXPXPXRPXXPXXPXXPPXEXXGPXP 760
P Q T PP P P P P P PP P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/48 (31%), Positives = 16/48 (33%)
Frame = +2
Query: 662 PTTXPPXPXPXPXRPXXPXXPXXPPXEXXGPXPXRGXXXPXXPPEAXP 805
P + PP P P P PP P P P PP A P
Sbjct: 1686 PVSTPPV-RPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPP 1732
Score = 26.2 bits (55), Expect = 6.1
Identities = 19/68 (27%), Positives = 19/68 (27%), Gaps = 2/68 (2%)
Frame = +3
Query: 618 PKRPXXNPX--PPXNXPPXQXPLXPXPXPXGRXXXXXXPXPPXXXXAPXPXGXXPXPPXP 791
P P P P PP P P P P PP P P PP P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMS------VPPPPSAPPMPAGPPSAPPPPLP 1736
Query: 792 QKPPP*XP 815
P P
Sbjct: 1737 ASSAPSVP 1744
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/48 (27%), Positives = 16/48 (33%)
Frame = +3
Query: 396 TXPXPPRAXGSDXXPRPSPXXRGGXXGPPPXPXXXPTXXPXXPPXVXP 539
T P P++ P+P PPP P P PP P
Sbjct: 1689 TPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 25.8 bits (54), Expect = 8.1
Identities = 11/33 (33%), Positives = 12/33 (36%)
Frame = +2
Query: 638 PPXPXQXPPTTXPPXPXPXPXRPXXPXXPXXPP 736
PP PP + PP P P P P P
Sbjct: 1709 PPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.5 bits (68), Expect = 0.16
Identities = 20/61 (32%), Positives = 22/61 (36%), Gaps = 4/61 (6%)
Frame = +2
Query: 638 PPXPXQX--PPTTXPPXPXPXPXRP--XXPXXPXXPPXEXXGPXPXRGXXXPXXPPEAXP 805
PP P PPT+ PP P P P P PP P P + PP A
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPS 189
Query: 806 L 808
L
Sbjct: 190 L 190
Score = 29.1 bits (62), Expect = 0.87
Identities = 18/60 (30%), Positives = 22/60 (36%), Gaps = 4/60 (6%)
Frame = +2
Query: 638 PPXPXQXPPT--TXPPXPXPXPXRPXXPXXPXXP--PXEXXGPXPXRGXXXPXXPPEAXP 805
PP P PP+ + PP P P P P P P + P P PP+ P
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPP 203
Score = 28.3 bits (60), Expect = 1.5
Identities = 23/81 (28%), Positives = 25/81 (30%), Gaps = 7/81 (8%)
Frame = +3
Query: 318 PPXXPRPPXHPXXXXXPXPXGRXXPXTXPXPPRAXG---SDXXPRPS----PXXRGGXXG 476
PP P PP P P P P P + S P PS P
Sbjct: 124 PPSAPAPPT-PQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVK 182
Query: 477 PPPXPXXXPTXXPXXPPXVXP 539
PP P+ P PP V P
Sbjct: 183 SPPSAPSLPSAVPPMPPKVPP 203
Score = 26.6 bits (56), Expect = 4.7
Identities = 22/85 (25%), Positives = 25/85 (29%)
Frame = +3
Query: 618 PKRPXXNPXPPXNXPPXQXPLXPXPXPXGRXXXXXXPXPPXXXXAPXPXGXXPXPPXPQK 797
P P PP + PP P P P P PP AP P P P
Sbjct: 130 PPTPQSELRPPTSAPP--RPSIPPPSPAS--------APPIPSKAPPIPSSLPPPAQPAA 179
Query: 798 PPP*XPXXKXXGXAXTTVXAPLPXP 872
P P A + +P P
Sbjct: 180 PVKSPPSAPSLPSAVPPMPPKVPPP 204
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 31.5 bits (68), Expect = 0.16
Identities = 38/182 (20%), Positives = 41/182 (22%)
Frame = +3
Query: 321 PXXPRPPXHPXXXXXPXPXGRXXPXTXPXPPRAXGSDXXPRPSPXXRGGXXGPPPXPXXX 500
P +PP P P R P P A P PP
Sbjct: 527 PSVHQPPAAPVAPEVPSAPQRP---AAPVVPEAPSVPQRPAVPVVPEALSVPQPPVAPVA 583
Query: 501 PTXXPXXPPXVXPXAXXXXXXXXXXXXXXXXXXXXXXERPKRPXXNPXPPXNXPPXQXPL 680
P P V P +RP P P PP +
Sbjct: 584 PEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPAAPVV 643
Query: 681 XPXPXPXGRXXXXXXPXPPXXXXAPXPXGXXPXPPXPQKPPP*XPXXKXXGXAXTTVXAP 860
P R P P P P PQ PP P G V P
Sbjct: 644 PEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQ--PPAVPVVPEAGQLNEPVVPP 701
Query: 861 LP 866
LP
Sbjct: 702 LP 703
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 31.1 bits (67), Expect = 0.22
Identities = 23/65 (35%), Positives = 24/65 (36%)
Frame = -3
Query: 502 GXFXGXGGGPXXPPRXXGLGRGXXSLPXALGGXGXVSGXXLPXGXGXXXXXGCXGGRGXX 323
G F G GGG PP G G G GG G G G G G GG G
Sbjct: 188 GGFGGFGGGSGGPPPGPG-GFGGFG---GFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGG 243
Query: 322 GGXWG 308
G +G
Sbjct: 244 PGGFG 248
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.5 bits (58), Expect = 2.7
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +1
Query: 730 PPRXXPGPXAXXGXXPPXPPPRSXPP 807
PP P P G PP PP PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 26.6 bits (56), Expect = 4.7
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 618 PKRPXXNPXPPXNXPPXQXPLXPXP 692
P P P PP PP Q P P P
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 26.2 bits (55), Expect = 6.1
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +3
Query: 627 PXXNPXPPXNXPPXQXPLXPXPXP 698
P NP PP P + P P P P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
Score = 25.8 bits (54), Expect = 8.1
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = +2
Query: 659 PPTTXPPXPXPXPXRPXXPXXPXXPP 736
PP PP P P P P PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 26.2 bits (55), Expect = 6.1
Identities = 16/55 (29%), Positives = 16/55 (29%), Gaps = 1/55 (1%)
Frame = +3
Query: 639 PXPPXNXPPXQXPLXPXPXPXGRXXXXXXPXPPXXXXAPXPXG-XXPXPPXPQKP 800
P PP P PL P P G P P G P P P P
Sbjct: 492 PLPPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAPFPGYPAVP 546
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.144 0.503
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,053,045
Number of Sequences: 5004
Number of extensions: 32309
Number of successful extensions: 254
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 122
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 440481800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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