Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_N22
(748 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein ... 28 1.2
SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein T... 26 5.0
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 26 5.0
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 26 6.6
SPAC458.03 |||nuclear telomere cap complex subunit |Schizosaccha... 26 6.6
SPAC57A7.07c |||homocysteine methyltransferase |Schizosaccharomy... 25 8.7
SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6 |Schizosacc... 25 8.7
SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces p... 25 8.7
SPBPB2B2.12c |||UDP-glucose 4-epimerase|Schizosaccharomyces pomb... 25 8.7
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 25 8.7
>SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 570
Score = 28.3 bits (60), Expect = 1.2
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 98 RNMARIYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVVVQYG 226
R +A Y+ + LGG++ S+ EK F + N DV+ + G
Sbjct: 112 RALADKYKHVLVLGGKDNSVRETAEKYGFKSVINELDVIAKLG 154
>SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein Trt1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 988
Score = 26.2 bits (55), Expect = 5.0
Identities = 20/78 (25%), Positives = 34/78 (43%)
Frame = -1
Query: 352 KVKIADNNLVTHKELALKVSSIIGTRVYVFDPSCYFSTPPFDTVLYDNIGTVLKDNKTAL 173
K K+ D V K + +S T+ +V + YF PF+ V+ +K + T
Sbjct: 608 KKKLKDPEFVIRKYATIHATSDRATKNFVSEAFSYFDMVPFEKVVQ---LLSMKTSDTLF 664
Query: 172 LSASIQASLPSSEIYRQL 119
+ + SSEI++ L
Sbjct: 665 VDFVDYWTKSSSEIFKML 682
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 26.2 bits (55), Expect = 5.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 463 KLRALLVVIPRILRSPPPTHPLIEDV 386
KLR++L I ++LR P P PL+ +
Sbjct: 105 KLRSVLEQILQLLREPNPDDPLVASI 130
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 25.8 bits (54), Expect = 6.6
Identities = 19/74 (25%), Positives = 30/74 (40%)
Frame = -3
Query: 665 QSXIPXTNHPQX*HPFPSIPXXXXXXXXXXGLKPPLSSEAPSAYLTPSSLGMXKGVSPPY 486
++ IP PQ + P+ P GLK + S L SL + + +P
Sbjct: 115 RATIPVKPEPQPQYKIPAAPAPTSKRVVNRGLKLNTNLRQASPILPSPSLKLDRQDAP-- 172
Query: 485 FQVNDESQASRLIS 444
Q+N E + L+S
Sbjct: 173 IQINHEQKEDFLVS 186
>SPAC458.03 |||nuclear telomere cap complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 868
Score = 25.8 bits (54), Expect = 6.6
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -3
Query: 140 LRDLPPVGRSSPCFFRLLWSLRKILIPYSSQFW 42
L++L +G SPC RL L +++P FW
Sbjct: 21 LKELQHIGVPSPCNLRLYHELISVIVP---TFW 50
>SPAC57A7.07c |||homocysteine methyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 308
Score = 25.4 bits (53), Expect = 8.7
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -1
Query: 328 LVTHKELALKVSSIIGTRVYVFDPSCY 248
+V H E LKV II T Y D S Y
Sbjct: 37 VVKHHEEFLKVCDIISTFTYQLDASIY 63
>SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 745
Score = 25.4 bits (53), Expect = 8.7
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -1
Query: 253 CYFSTPPFDTVLYDNIGTVLKDNKTALLSASI 158
CY P + + L ++I T+L DN ++ A++
Sbjct: 168 CYSLDPSYKSQLEEHIKTLLSDNSPIVVPAAL 199
>SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 390
Score = 25.4 bits (53), Expect = 8.7
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 468 ITSFAPY*SSFHAYSAPLLQLTPSSKTSS 382
+ SF PY S F A P L ++PS+ +S
Sbjct: 302 LQSFHPYESLFSAGQPPSLPISPSTSQNS 330
>SPBPB2B2.12c |||UDP-glucose 4-epimerase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 25.4 bits (53), Expect = 8.7
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = -1
Query: 370 QAIIDYKVKIADNNL-VTHKELALKVSSIIGTRVYVFDPSCYFSTPPFDTVLYDNIGTVL 194
+ ++ Y +K +N+L + +K + + S + T V + + S + P T+ GT++
Sbjct: 496 ETLVKYTIK--NNSLEIEYKSVIPEYSKLNVTAVNLTNHSYWNLASPNKTI----DGTII 549
Query: 193 KDNKTALLSASIQASLPSSEI 131
K L + + SLP+ +I
Sbjct: 550 KSTTNVYLKVNSETSLPTGDI 570
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 25.4 bits (53), Expect = 8.7
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 113 IYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVV 214
++Q A+ LG RS RC KSSF+ + DVV
Sbjct: 33 LHQQAL-LGRNGRSSKRCSPKSSFIRNSPKIDVV 65
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,778,772
Number of Sequences: 5004
Number of extensions: 53581
Number of successful extensions: 152
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 152
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 355273338
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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