Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_N21
         (707 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0240 + 8196140-8198248,8198381-8198650                           63   2e-10
02_05_0865 - 32329430-32329642,32329735-32330062,32330136-32330590     30   1.6  
10_08_0577 + 18894171-18894917                                         29   2.7  
04_04_0674 + 27173948-27174188,27174704-27175260,27175310-271753...    29   4.8  
12_02_1147 - 26459481-26460124,26460241-26460382,26461658-264616...    28   6.3  
03_05_0407 - 23906388-23906966,23907028-23907915,23908141-239087...    28   6.3  

>02_02_0240 + 8196140-8198248,8198381-8198650
          Length = 792

 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 43/133 (32%), Positives = 63/133 (47%), Gaps = 3/133 (2%)
 Frame = -1

Query: 482 PDRVVVKKYNPKEAKPRAAAGDEWLVLPITGEKIPASKVAEHVRIGLLDPRWLXXXXXXX 303
           P R+V     P+E  P      +++V PITGE IP S++ EH+RI L+DP++        
Sbjct: 393 PMRIVKNYKRPEERIPAERDPTKFVVSPITGELIPISEMEEHMRISLIDPKY--KEQKER 450

Query: 302 XXXXXXXXALAPGAAIEASLKQLAERRTDIFGVGDXXXXXXXXXXXXXXKRDE--RVTWD 129
                    LAP   I  ++  LA  R DIFG  +              K ++  +V WD
Sbjct: 451 MLAKIKETTLAPDDEISRNIVGLARTRPDIFGTTEEEVSNAVKAEIEKKKDEQPKQVIWD 510

Query: 128 GHTSSV-EAATRA 93
           GH+ S+   AT+A
Sbjct: 511 GHSGSIGRTATQA 523


>02_05_0865 - 32329430-32329642,32329735-32330062,32330136-32330590
          Length = 331

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = -1

Query: 482 PDRVVVKKYNPKEAKPRAAAGDEWLVLPITGEKIPASKVAEHVRIG 345
           P+  V+    P+ A   A A  EW +  +    +PA+ VAE  R+G
Sbjct: 40  PEIPVIDMAAPESAARVAEAAAEWGLFQVVNHGVPAAAVAELQRVG 85


>10_08_0577 + 18894171-18894917
          Length = 248

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = -1

Query: 509 ADEAPLPPRPDRVVVKKYNPKEAKPRAAAGD 417
           AD APLPPRP     ++     A P  AA D
Sbjct: 65  ADAAPLPPRPPTYAAEQCPADPADPSPAADD 95


>04_04_0674 +
           27173948-27174188,27174704-27175260,27175310-27175399,
           27175475-27175714,27175801-27176022,27176124-27176433,
           27176528-27176847,27176906-27177021,27177133-27177227,
           27177331-27177407,27177520-27177615
          Length = 787

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +3

Query: 183 DGRFLVPYTEDVSTTLRQLFKRSLDGGPGGE 275
           DG  +V YTEDV      +    LDGG  GE
Sbjct: 127 DGDEVVEYTEDVIEEETDMVDEELDGGDDGE 157


>12_02_1147 -
           26459481-26460124,26460241-26460382,26461658-26461699,
           26463377-26463502
          Length = 317

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -1

Query: 524 QDAPRADEAPLPPRPDRVVVKKYNPKEAKPRAAA 423
           +DA  A+    PP P     KK + K A+P AAA
Sbjct: 222 EDAKPAESEAAPPAPSEGGEKKEDAKPAEPEAAA 255


>03_05_0407 -
           23906388-23906966,23907028-23907915,23908141-23908753,
           23908858-23909021
          Length = 747

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +2

Query: 599 EFYPPFPQVPHQTPIPIRIQFASQYHRRHLVP 694
           ++ PP PQV +Q     + QFA QY++   VP
Sbjct: 259 QYQPPSPQVQYQEGGSAQPQFAPQYNQFEPVP 290


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,999,544
Number of Sequences: 37544
Number of extensions: 181666
Number of successful extensions: 770
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1827423340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)