Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_N21
         (707 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY047530-1|AAK77262.1|  784|Drosophila melanogaster GH03554p pro...   182   6e-46
AE014297-2286|AAF55372.1|  784|Drosophila melanogaster CG16941-P...   182   6e-46
AE014297-3098|AAF55956.1|  444|Drosophila melanogaster CG13407-P...    29   4.7  
AF492764-1|AAM11673.1|  417|Drosophila melanogaster gag protein ...    29   8.2  

>AY047530-1|AAK77262.1|  784|Drosophila melanogaster GH03554p
           protein.
          Length = 784

 Score =  182 bits (442), Expect = 6e-46
 Identities = 101/181 (55%), Positives = 117/181 (64%), Gaps = 3/181 (1%)
 Frame = -1

Query: 584 DDNRVQDMXXXXXXXXXXXEQDAPRADEAP-LPPRPDRVVVKKYNPKEAKPRAAA--GDE 414
           D+ +VQDM            +  P    AP LPP  D+VVVKKY+PK  +P+ A    DE
Sbjct: 360 DNTQVQDMDEASSDEDTPTTKLQPSV--APMLPPTHDKVVVKKYDPKATQPKQAPMPTDE 417

Query: 413 WLVLPITGEKIPASKVAEHVRIGLLDPRWLXXXXXXXXXXXXXXXALAPGAAIEASLKQL 234
           +L+ PITGEKIPASKV+EH+RIGLLDPRW+                 A G AIEASLKQL
Sbjct: 418 YLISPITGEKIPASKVSEHMRIGLLDPRWVEQRDKHTVEKINQDNVFAAGTAIEASLKQL 477

Query: 233 AERRTDIFGVGDXXXXXXXXXXXXXXKRDERVTWDGHTSSVEAATRAARAHITLEDQIQQ 54
           AERRTDIFGVGD              K+D+RVTWDGHTSSVEAATRAARA+ITLE+QI Q
Sbjct: 478 AERRTDIFGVGDEETVIGKKLGEEETKKDDRVTWDGHTSSVEAATRAARANITLEEQIHQ 537

Query: 53  I 51
           I
Sbjct: 538 I 538


>AE014297-2286|AAF55372.1|  784|Drosophila melanogaster CG16941-PA
           protein.
          Length = 784

 Score =  182 bits (442), Expect = 6e-46
 Identities = 101/181 (55%), Positives = 117/181 (64%), Gaps = 3/181 (1%)
 Frame = -1

Query: 584 DDNRVQDMXXXXXXXXXXXEQDAPRADEAP-LPPRPDRVVVKKYNPKEAKPRAAA--GDE 414
           D+ +VQDM            +  P    AP LPP  D+VVVKKY+PK  +P+ A    DE
Sbjct: 360 DNTQVQDMDEASSDEDTPTTKLQPSV--APMLPPTHDKVVVKKYDPKATQPKQAPMPTDE 417

Query: 413 WLVLPITGEKIPASKVAEHVRIGLLDPRWLXXXXXXXXXXXXXXXALAPGAAIEASLKQL 234
           +L+ PITGEKIPASKV+EH+RIGLLDPRW+                 A G AIEASLKQL
Sbjct: 418 YLISPITGEKIPASKVSEHMRIGLLDPRWVEQRDKHTVEKINQDNVFAAGTAIEASLKQL 477

Query: 233 AERRTDIFGVGDXXXXXXXXXXXXXXKRDERVTWDGHTSSVEAATRAARAHITLEDQIQQ 54
           AERRTDIFGVGD              K+D+RVTWDGHTSSVEAATRAARA+ITLE+QI Q
Sbjct: 478 AERRTDIFGVGDEETVIGKKLGEEETKKDDRVTWDGHTSSVEAATRAARANITLEEQIHQ 537

Query: 53  I 51
           I
Sbjct: 538 I 538


>AE014297-3098|AAF55956.1|  444|Drosophila melanogaster CG13407-PA
           protein.
          Length = 444

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +2

Query: 578 YRPADGTEFYPPFPQVPHQTPIPIRIQFASQYHRRHLVPY 697
           +  +DG +FYP    + H +      +  S Y++ H  PY
Sbjct: 307 FSTSDGGDFYPNRTHIDHSSRPDFESESGSDYYQHHYNPY 346


>AF492764-1|AAM11673.1|  417|Drosophila melanogaster gag protein
           protein.
          Length = 417

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +2

Query: 602 FYPPFPQVPHQTPIPIRIQFASQYHRRHLVP 694
           +YPP+P  P  TP P +  F  QY  R   P
Sbjct: 239 YYPPYPYAPIHTPRPNQTPF-PQYQPRPTYP 268


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,520,187
Number of Sequences: 53049
Number of extensions: 280749
Number of successful extensions: 1213
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1209
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)