Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_N19
         (717 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0640 - 30558523-30559027,30559123-30559252,30559388-305598...    29   2.8  
12_01_0302 - 2286171-2286341,2286747-2286968                           29   3.7  
11_02_0038 - 7631462-7634428,7635975-7636250                           28   6.4  
09_04_0506 - 18188785-18190599                                         28   6.4  
02_01_0302 - 2021221-2023305                                           28   6.4  
05_02_0127 - 6872780-6872835,6872943-6873026,6873501-6873784,687...    28   8.5  
02_02_0718 - 13290764-13290897,13292375-13293041,13293364-132937...    28   8.5  

>02_05_0640 - 30558523-30559027,30559123-30559252,30559388-30559868,
            30560292-30560346,30560537-30560613,30561228-30561315,
            30561490-30561593,30562050-30562231,30562347-30563109,
            30563195-30563438,30564513-30564658,30565158-30565283,
            30565404-30565517,30565595-30565762,30566283-30566528,
            30566605-30566767,30566970-30567064,30567274-30567357,
            30567769-30568055,30568359-30568572,30568923-30569140,
            30569386-30569623,30570312-30571118,30571202-30571301,
            30571694-30571737,30571824-30571973
          Length = 1942

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 20/65 (30%), Positives = 30/65 (46%)
 Frame = -1

Query: 240  PPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSETYRQLVDPRHVSSDSFGVYVKS*SL 61
            P F T+LY     ++KD      S+     L S+  Y  L+DP   S D+    + +   
Sbjct: 1349 PEFHTLLYAEAARIIKDCWWLADSSRPVKELDSAVGYA-LLDPTWASQDNTSTAIGNIVA 1407

Query: 60   ILHSF 46
            +LHSF
Sbjct: 1408 LLHSF 1412


>12_01_0302 - 2286171-2286341,2286747-2286968
          Length = 130

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 81  RLQRSRKKHGEDLPTGGRSRRKGEKLE*MQREEQ 182
           RL+R RK +  D+   G  + +GEKLE  + +E+
Sbjct: 57  RLERLRKGYARDVRAAGAMKVRGEKLENWREKEK 90


>11_02_0038 - 7631462-7634428,7635975-7636250
          Length = 1080

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 15/56 (26%), Positives = 26/56 (46%)
 Frame = -1

Query: 255 CYFSTPPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSETYRQLVDPRHVSSDSF 88
           CYF   P +   +  +R +   NKT +LS+ ++       T    + P ++ SD F
Sbjct: 585 CYFDQLPLEPTTWSKLRRISIVNKTDMLSSVVEKGHCRVRTLMFCMSP-NIDSDVF 639


>09_04_0506 - 18188785-18190599
          Length = 604

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
 Frame = -2

Query: 677 PIIKSPDSIHQPPQT*HPFPSIPXTP**KEFAPGLKPSVVIRGSIXV-SHPLVTGHG*RG 501
           P+   P+ +H PPQ   P  + P  P   +  PG       +G       P+V G+G  G
Sbjct: 120 PVPDRPNPVHLPPQPQPPVAAAPPPPPHNQIQPGGGDGFHRQGGGNYGGGPIVVGNGGGG 179

Query: 500 FAP 492
             P
Sbjct: 180 DGP 182


>02_01_0302 - 2021221-2023305
          Length = 694

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
 Frame = -1

Query: 711 QPPSXXXXVHQPDHQIPGFHTP-TTPDLTSISINPP 607
           QPPS       P   +PG  TP TTP   S    PP
Sbjct: 593 QPPSGQPGASPPTQHVPGAGTPTTTPPSHSHPSTPP 628


>05_02_0127 -
           6872780-6872835,6872943-6873026,6873501-6873784,
           6874403-6874568,6876724-6876906,6877400-6877505,
           6877620-6877775,6878882-6878899
          Length = 350

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = -1

Query: 678 PDHQIPGFHTPTTPDLTSISINPPDA-VVEGVRA 580
           P  Q PG   P  P + SIS  PP   VV G+ A
Sbjct: 163 PVLQQPGIPAPVQPHVNSISCGPPGCHVVNGIPA 196


>02_02_0718 -
           13290764-13290897,13292375-13293041,13293364-13293719,
           13294559-13294629,13295326-13295336
          Length = 412

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -1

Query: 441 IPRILRSPPPTHPLIEDVVMATNQAIIDYK 352
           +P++L+SPP T+  IED    +  + ID K
Sbjct: 382 LPQLLQSPPETYHAIEDGHNPSKTSFIDMK 411


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,013,304
Number of Sequences: 37544
Number of extensions: 391727
Number of successful extensions: 1003
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1002
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)