Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_N17
(885 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U04520-2|AAC27816.1| 1685|Homo sapiens type IV collagen alpha 5 ... 30 9.7
U04520-1|AAF66217.2| 1691|Homo sapiens type IV collagen alpha 5 ... 30 9.7
S57132-1|AAB25797.1| 1186|Homo sapiens type XVI collagen alpha 1... 30 9.7
M90464-1|AAA52046.1| 910|Homo sapiens alpha-5 type IV collagen ... 30 9.7
M58526-1|AAA99480.1| 1604|Homo sapiens alpha-5 type IV collagen ... 30 9.7
AL035425-1|CAB90289.2| 1685|Homo sapiens collagen type IV alpha ... 30 9.7
AL034369-4|CAA22267.2| 1685|Homo sapiens collagen type IV alpha ... 30 9.7
AL031622-1|CAI43038.1| 1685|Homo sapiens collagen type IV alpha ... 30 9.7
AB209571-1|BAD92808.1| 1463|Homo sapiens alpha 1 type XVI collag... 30 9.7
>U04520-2|AAC27816.1| 1685|Homo sapiens type IV collagen alpha 5
chain protein.
Length = 1685
Score = 30.3 bits (65), Expect = 9.7
Identities = 17/56 (30%), Positives = 21/56 (37%)
Frame = -2
Query: 206 PPGXPGXIFXXXXXXXXXXAXXLGFRXLPGFPGPAF*XXFPLXXGXPKRLXPXEPP 39
PPG PG + G + PG+PGP P G P + P PP
Sbjct: 145 PPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPGIQGLPGPTGIPGPIGPPGPP 200
>U04520-1|AAF66217.2| 1691|Homo sapiens type IV collagen alpha 5
chain protein.
Length = 1691
Score = 30.3 bits (65), Expect = 9.7
Identities = 17/56 (30%), Positives = 21/56 (37%)
Frame = -2
Query: 206 PPGXPGXIFXXXXXXXXXXAXXLGFRXLPGFPGPAF*XXFPLXXGXPKRLXPXEPP 39
PPG PG + G + PG+PGP P G P + P PP
Sbjct: 145 PPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPGIQGLPGPTGIPGPIGPPGPP 200
>S57132-1|AAB25797.1| 1186|Homo sapiens type XVI collagen alpha 1
chain protein.
Length = 1186
Score = 30.3 bits (65), Expect = 9.7
Identities = 17/49 (34%), Positives = 18/49 (36%)
Frame = -2
Query: 212 PTPPGXPGXIFXXXXXXXXXXAXXLGFRXLPGFPGPAF*XXFPLXXGXP 66
P PPG G GF+ PGFPGP FP G P
Sbjct: 710 PGPPGPAGPRGERGPQGNSGEKGDQGFQGQPGFPGPPGPPGFPGKVGSP 758
>M90464-1|AAA52046.1| 910|Homo sapiens alpha-5 type IV collagen
protein.
Length = 910
Score = 30.3 bits (65), Expect = 9.7
Identities = 17/56 (30%), Positives = 21/56 (37%)
Frame = -2
Query: 206 PPGXPGXIFXXXXXXXXXXAXXLGFRXLPGFPGPAF*XXFPLXXGXPKRLXPXEPP 39
PPG PG + G + PG+PGP P G P + P PP
Sbjct: 145 PPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPGIQGLPGPTGIPGPIGPPGPP 200
>M58526-1|AAA99480.1| 1604|Homo sapiens alpha-5 type IV collagen
protein.
Length = 1604
Score = 30.3 bits (65), Expect = 9.7
Identities = 17/56 (30%), Positives = 21/56 (37%)
Frame = -2
Query: 206 PPGXPGXIFXXXXXXXXXXAXXLGFRXLPGFPGPAF*XXFPLXXGXPKRLXPXEPP 39
PPG PG + G + PG+PGP P G P + P PP
Sbjct: 64 PPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPGIQGLPGPTGIPGPIGPPGPP 119
>AL035425-1|CAB90289.2| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 30.3 bits (65), Expect = 9.7
Identities = 17/56 (30%), Positives = 21/56 (37%)
Frame = -2
Query: 206 PPGXPGXIFXXXXXXXXXXAXXLGFRXLPGFPGPAF*XXFPLXXGXPKRLXPXEPP 39
PPG PG + G + PG+PGP P G P + P PP
Sbjct: 145 PPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPGIQGLPGPTGIPGPIGPPGPP 200
>AL034369-4|CAA22267.2| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 30.3 bits (65), Expect = 9.7
Identities = 17/56 (30%), Positives = 21/56 (37%)
Frame = -2
Query: 206 PPGXPGXIFXXXXXXXXXXAXXLGFRXLPGFPGPAF*XXFPLXXGXPKRLXPXEPP 39
PPG PG + G + PG+PGP P G P + P PP
Sbjct: 145 PPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPGIQGLPGPTGIPGPIGPPGPP 200
>AL031622-1|CAI43038.1| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 30.3 bits (65), Expect = 9.7
Identities = 17/56 (30%), Positives = 21/56 (37%)
Frame = -2
Query: 206 PPGXPGXIFXXXXXXXXXXAXXLGFRXLPGFPGPAF*XXFPLXXGXPKRLXPXEPP 39
PPG PG + G + PG+PGP P G P + P PP
Sbjct: 145 PPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPGIQGLPGPTGIPGPIGPPGPP 200
>AB209571-1|BAD92808.1| 1463|Homo sapiens alpha 1 type XVI collagen
precursor variant protein.
Length = 1463
Score = 30.3 bits (65), Expect = 9.7
Identities = 17/49 (34%), Positives = 18/49 (36%)
Frame = -2
Query: 212 PTPPGXPGXIFXXXXXXXXXXAXXLGFRXLPGFPGPAF*XXFPLXXGXP 66
P PPG G GF+ PGFPGP FP G P
Sbjct: 987 PGPPGPAGPRGERGPQGNSGEKGDQGFQGQPGFPGPPGPPGFPGKVGSP 1035
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,902,250
Number of Sequences: 237096
Number of extensions: 2170195
Number of successful extensions: 3210
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3000
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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