Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_N16
(926 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 0.41
U58764-3|AAB00725.1| 122|Caenorhabditis elegans Hypothetical pr... 29 3.6
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 3.6
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 3.6
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 3.6
U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific ... 29 4.7
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 6.2
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 6.2
Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 28 8.2
U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific ... 28 8.2
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 28 8.2
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 28 8.2
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 8.2
U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific... 28 8.2
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 28 8.2
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 28 8.2
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.5 bits (68), Expect = 0.88
Identities = 22/72 (30%), Positives = 22/72 (30%), Gaps = 4/72 (5%)
Frame = +1
Query: 721 PPPPPPPXXXXXXXG----GGGGXXXFFXFPPXAGGGXXXXXXKXXXXKXXXXXXXXPPP 888
PPPPPP G GGGG GGG PPP
Sbjct: 54 PPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPP 113
Query: 889 XXXXXGGXXGGG 924
GG GGG
Sbjct: 114 PPPACGGGCGGG 125
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -1
Query: 803 GGXKKKXXXPPPPPXXXXXXXGGGGGG 723
GG PPPPP GGGGGG
Sbjct: 45 GGGCGGGCAPPPPPPACGGGCGGGGGG 71
Score = 30.3 bits (65), Expect(2) = 0.41
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -1
Query: 803 GGXKKKXXXPPPPPXXXXXXXGGGGGG 723
GG PPPPP GGGGGG
Sbjct: 102 GGGCGGGCAPPPPPPACGGGCGGGGGG 128
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 724 PPPPPPXXXXXXXGGGGG 777
PPPPPP GGGGG
Sbjct: 111 PPPPPPACGGGCGGGGGG 128
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -1
Query: 803 GGXKKKXXXPPPPPXXXXXXXGGGGGGG 720
GG PPPPP GGGGG G
Sbjct: 46 GGCGGGCAPPPPPPACGGGCGGGGGGCG 73
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -1
Query: 803 GGXKKKXXXPPPPPXXXXXXXGGGGGGG 720
GG PPPPP GGGGG G
Sbjct: 103 GGCGGGCAPPPPPPACGGGCGGGGGGCG 130
Score = 21.0 bits (42), Expect(2) = 0.41
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 740 GGGGGGG 720
GGGGGGG
Sbjct: 142 GGGGGGG 148
>U58764-3|AAB00725.1| 122|Caenorhabditis elegans Hypothetical
protein M03E7.2 protein.
Length = 122
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +1
Query: 721 PPPPPPPXXXXXXXGGGGGXXXFFXFPPXAGGG 819
PPP PPP GG GG + P G G
Sbjct: 57 PPPMPPPGMSPYGMGGMGGMSPYGMMGPMGGMG 89
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1
Query: 721 PPPPPPPXXXXXXXGGGGGXXXFFXFPPXAGG 816
PPPPPPP GG PP +GG
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGG 757
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1
Query: 721 PPPPPPPXXXXXXXGGGGGXXXFFXFPPXAGG 816
PPPPPPP GG PP +GG
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGG 757
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1
Query: 721 PPPPPPPXXXXXXXGGGGGXXXFFXFPPXAGG 816
PPPPPPP GG PP +GG
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGG 340
>U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific
family, class qprotein 2 protein.
Length = 405
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 818 PPPAXGGXKKKXXXPPPPPXXXXXXXGGGGGGG 720
P GG K PPP GGGGGG
Sbjct: 27 PAGGGGGASKVGGGAAPPPGTSVYMGAGGGGGG 59
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/56 (30%), Positives = 18/56 (32%), Gaps = 1/56 (1%)
Frame = -1
Query: 926 PPPPXXPPXXXXXGGGXXXXXXXXFXXXFFXXXXXX-PPPAXGGXKKKXXXPPPPP 762
PPPP PP G F PPP G + PPPPP
Sbjct: 297 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPP 352
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/56 (30%), Positives = 18/56 (32%), Gaps = 1/56 (1%)
Frame = -1
Query: 926 PPPPXXPPXXXXXGGGXXXXXXXXFXXXFFXXXXXX-PPPAXGGXKKKXXXPPPPP 762
PPPP PP G F PPP G + PPPPP
Sbjct: 307 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPP 362
>Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical
protein T16G1.1 protein.
Length = 695
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/36 (36%), Positives = 15/36 (41%), Gaps = 3/36 (8%)
Frame = -1
Query: 818 PPPAXGGXKKKXXXPPPPPXXXXXXXGGG---GGGG 720
PP + G + PPPPP G GGGG
Sbjct: 520 PPSSSGSGSNRRSGPPPPPPPPRSSGANGNRNGGGG 555
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 721 PPPPPPPXXXXXXXGGGGG 777
PPPPPPP GGG
Sbjct: 304 PPPPPPPPPAPAPVSSGGG 322
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 721 PPPPPPPXXXXXXXGGGGG 777
PPPPPPP GGG
Sbjct: 304 PPPPPPPPPAPAPVSSGGG 322
>U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific
family, class qprotein 4 protein.
Length = 373
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -1
Query: 809 AXGGXKKKXXXPPPPPXXXXXXXGGGGGGG 720
A GG PPPP GGGGGGG
Sbjct: 269 AMGGGPSAFGGAPPPPSGSAM--GGGGGGG 296
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 721 PPPPPPPXXXXXXXGGGGGXXXFFXFPPXAGGG 819
PPPPPPP G G PP GG
Sbjct: 630 PPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 662
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 721 PPPPPPPXXXXXXXGGGGGXXXFFXFPPXAGGG 819
PPPPPPP G G PP GG
Sbjct: 456 PPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 488
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3
Query: 513 PPXQRXGGGGXFXXPPPPPR 454
PP ++ GG PPPPPR
Sbjct: 126 PPPRKSRAGGSSPPPPPPPR 145
>U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific
family, class qprotein 3 protein.
Length = 265
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -1
Query: 809 AXGGXKKKXXXPPPPPXXXXXXXGGGGGGG 720
A GG PPPP GGGGGGG
Sbjct: 163 AMGGGPSAFGGAPPPPSGSAM--GGGGGGG 190
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -1
Query: 812 PAXGGXKKKXXXPPPPPXXXXXXXGGGGGG 723
P+ GG PPPPP GGGGGG
Sbjct: 20 PSGGGGGCGCAPPPPPP---ACGCGGGGGG 46
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 458 GGGGGXXKXPPPPXLWXGG 514
G GGG + PPPP + GG
Sbjct: 203 GSGGGSGRFPPPPPPYGGG 221
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.163 0.599
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,408,773
Number of Sequences: 27780
Number of extensions: 230950
Number of successful extensions: 4734
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2463
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2381234086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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