Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_N14
(930 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0719 + 31474028-31474476,31474881-31474939,31479145-31479983 34 0.14
09_02_0603 - 11150739-11150746,11150791-11151340 31 1.7
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 31 1.7
12_02_1174 - 26696869-26698191 30 2.3
10_08_0216 - 15942379-15942852,15942956-15943033 30 2.3
04_04_0708 - 27441373-27442611 25 2.8
10_08_0548 - 18685114-18685230,18685615-18685724,18685779-186858... 30 3.0
09_04_0318 - 16620177-16620582,16620686-16620765,16620873-166212... 30 3.0
06_03_1326 - 29355467-29355817 26 3.3
07_01_0678 - 5103836-5104613,5104697-5104888,5104994-5105036,510... 29 4.0
04_03_0800 - 19820886-19821421,19822476-19822563,19822871-19822888 29 4.0
11_02_0065 - 7938007-7938393,7939292-7939435,7940597-7940665,794... 29 5.3
09_04_0368 + 17005231-17005437,17005707-17005963,17006061-170061... 29 5.3
07_01_0080 + 587674-588510 29 5.3
06_03_0082 + 16363742-16364632 29 5.3
06_01_0941 + 7241050-7241331 29 5.3
03_01_0023 + 198414-198968 29 5.3
09_04_0745 + 19884868-19886000,19886110-19886309,19886422-198866... 29 7.0
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 29 7.0
02_02_0359 - 9390175-9390416,9390924-9391044,9391069-9391410,939... 29 7.0
12_01_0347 + 2658545-2659309 28 9.2
06_03_0292 + 19207029-19207940 28 9.2
06_01_0893 - 6834350-6834464,6835042-6835218,6835301-6835350,683... 28 9.2
05_04_0188 - 18883979-18884250,18885046-18885666,18885762-188858... 28 9.2
04_04_0887 + 29095087-29096166 28 9.2
02_05_0686 - 30900748-30902167,30903442-30904742 28 9.2
02_04_0382 - 22501041-22501279,22501717-22501810 28 9.2
>01_06_0719 + 31474028-31474476,31474881-31474939,31479145-31479983
Length = 448
Score = 34.3 bits (75), Expect = 0.14
Identities = 20/59 (33%), Positives = 20/59 (33%)
Frame = -2
Query: 557 GGGGGGXKXXGGXXXXPPXFXXXXXXXXXXXXXXXXKGAPXGGGGXXXGGGXX*TPRGG 381
GGGGGG GG G P GGGG GGG P GG
Sbjct: 286 GGGGGGGNTGGGIGGSTGGGGRGAGAGVGGITGGGDGGFPGGGGGGFSGGGGGGFPGGG 344
>09_02_0603 - 11150739-11150746,11150791-11151340
Length = 185
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +2
Query: 491 PXKKXGGXXKXPPXFXXPPPPPPXFXF 571
P + G PP F PPPPPP F
Sbjct: 27 PPRLEKGNFALPPPFGFPPPPPPGSTF 53
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 30.7 bits (66), Expect = 1.7
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 488 PPXKKXGGXXKXPPXFXXPPPPPP 559
PP GG PP + PPP PP
Sbjct: 339 PPSSYGGGPGSYPPSYGAPPPNPP 362
Score = 25.4 bits (53), Expect(2) = 7.8
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = -2
Query: 773 PPPXKXKKKXXGGGGXGGXXXLPXFXXXXXXXXXXKXGGGXXPPPP 636
PPP GG GG LP GGG PPP
Sbjct: 357 PPP----NPPYSGGAPGGQGSLPPSYDGGYGGRPMPGGGGPGAPPP 398
Score = 21.4 bits (43), Expect(2) = 7.8
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 557 GGGGGGXKXXGG 522
GGGGGG GG
Sbjct: 402 GGGGGGGGGGGG 413
>12_02_1174 - 26696869-26698191
Length = 440
Score = 30.3 bits (65), Expect = 2.3
Identities = 16/57 (28%), Positives = 17/57 (29%)
Frame = +1
Query: 265 PPXKKXXFFFRVXXPKXXXXXXXXXXXXXXXXWGXXXKXPPRGV*XXPPPXXXPPPP 435
PP + RV PK W PP PPP PPPP
Sbjct: 249 PPPRAPVKMPRVLEPKPSPPPPSPLPPPPEDYWSPTAVTPPEPTKPKPPPPSPPPPP 305
>10_08_0216 - 15942379-15942852,15942956-15943033
Length = 183
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/60 (31%), Positives = 20/60 (33%)
Frame = -2
Query: 560 AGGGGGGXKXXGGXXXXPPXFXXXXXXXXXXXXXXXXKGAPXGGGGXXXGGGXX*TPRGG 381
AGGGGGG GG + A GGGG GGG GG
Sbjct: 37 AGGGGGGGGGGGGYYGPYGPYYGPYYGPYYGPYASGGAAASGGGGGGGGGGGYGYGAGGG 96
>04_04_0708 - 27441373-27442611
Length = 412
Score = 25.4 bits (53), Expect(2) = 2.8
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 524 PPXFXXPPPPPP 559
PP PPPPPP
Sbjct: 237 PPLLPPPPPPPP 248
Score = 23.0 bits (47), Expect(2) = 2.8
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 542 PPPPPPXF 565
PPPPPP F
Sbjct: 245 PPPPPPPF 252
>10_08_0548 -
18685114-18685230,18685615-18685724,18685779-18685802,
18686135-18686213,18686346-18686588,18686659-18686823,
18686960-18687037,18687185-18687231,18687319-18687379,
18687667-18687723,18688164-18688247,18689292-18689357,
18689447-18689574,18689693-18689885
Length = 483
Score = 29.9 bits (64), Expect = 3.0
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 507 GGGXXPPPXFXXPPPPPRXFXF 572
GGG PP PPPPP+ F
Sbjct: 28 GGGSAPPHPLLRPPPPPQSHPF 49
>09_04_0318 -
16620177-16620582,16620686-16620765,16620873-16621213,
16621298-16621559
Length = 362
Score = 29.9 bits (64), Expect = 3.0
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -2
Query: 647 PPPPPPXXKXRXXXXXXXXXXXXFXKXKXAGGGGGG 540
PPPPPP + R GGGGGG
Sbjct: 78 PPPPPPSSESRHLEASTRGFDVNRPPSSGGGGGGGG 113
>06_03_1326 - 29355467-29355817
Length = 116
Score = 25.8 bits (54), Expect(2) = 3.3
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 566 KXAGGGGGGXKXXGG 522
K GGGGGG K GG
Sbjct: 13 KGGGGGGGGGKGGGG 27
Score = 22.6 bits (46), Expect(2) = 3.3
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -2
Query: 446 GAPXGGGGXXXGGGXX*TPRGG 381
G GGGG GGG +GG
Sbjct: 26 GGGSGGGGRSGGGGGGGGGKGG 47
>07_01_0678 -
5103836-5104613,5104697-5104888,5104994-5105036,
5105712-5105835,5105924-5106016,5106754-5106931,
5107032-5107138,5108098-5108179,5108277-5108314,
5108409-5108495,5109025-5109135,5109282-5109773
Length = 774
Score = 29.5 bits (63), Expect = 4.0
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 776 PPPPXKXKKKXXGGGGXGGXXXLP 705
PPPP + +++ GGG GG P
Sbjct: 104 PPPPERPRRRAAAGGGAGGAEESP 127
>04_03_0800 - 19820886-19821421,19822476-19822563,19822871-19822888
Length = 213
Score = 29.5 bits (63), Expect = 4.0
Identities = 18/53 (33%), Positives = 19/53 (35%), Gaps = 4/53 (7%)
Frame = -2
Query: 776 PPPPXKXKK---KXXGGGGXG-GXXXLPXFXXXXXXXXXXKXGGGXXPPPPPP 630
PPPP K K GG G G +P G PPPPPP
Sbjct: 126 PPPPPKPKPCECTYCGGHGGGCNKPAVPPCAGGCSISDGGACGASCKPPPPPP 178
>11_02_0065 -
7938007-7938393,7939292-7939435,7940597-7940665,
7940762-7940809,7941488-7941584,7941688-7941767,
7941841-7941912,7942256-7942350,7943903-7943984,
7945176-7945209,7945255-7945262,7945657-7946058
Length = 505
Score = 29.1 bits (62), Expect = 5.3
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 721 PPXPPPPXXFFFXFXGGGG 777
PP PPPP ++ GGGG
Sbjct: 79 PPPPPPPFEYYPAVGGGGG 97
>09_04_0368 +
17005231-17005437,17005707-17005963,17006061-17006115,
17006196-17006276,17006357-17006453,17006560-17006627,
17006788-17006886,17007008-17007049,17007124-17007263,
17007882-17008018,17008275-17008444
Length = 450
Score = 29.1 bits (62), Expect = 5.3
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 785 FXXPPPPXKXKKKXXGGGGXGG 720
F PPPP GGGG GG
Sbjct: 14 FPWPPPPPPGSSSGRGGGGGGG 35
>07_01_0080 + 587674-588510
Length = 278
Score = 29.1 bits (62), Expect = 5.3
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 488 PPXKKXGGXXKXPPXFXXPPPPPP 559
PP G PP PPPPPP
Sbjct: 96 PPPPSSGSPPPPPPPPPPPPPPPP 119
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 488 PPXKKXGGXXKXPPXFXXPPPPPP 559
PP G PP PPPPPP
Sbjct: 95 PPPPPSSGSPPPPPPPPPPPPPPP 118
>06_03_0082 + 16363742-16364632
Length = 296
Score = 29.1 bits (62), Expect = 5.3
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = +1
Query: 634 GGGGGXXPPPXXXXXXXXXXXXXXGRXXXPPXPPPPXXFFFXFXGGGG 777
GGG G PP G PP PPPP F GG G
Sbjct: 140 GGGDGVEPPDWCCCCCCGGGDQFGGGEERPP-PPPPPPFPDDSDGGDG 186
>06_01_0941 + 7241050-7241331
Length = 93
Score = 29.1 bits (62), Expect = 5.3
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -2
Query: 776 PPPPXKXKKKXXGGGGXGG 720
PPPP K GGGG GG
Sbjct: 20 PPPPSSSSGKRSGGGGGGG 38
>03_01_0023 + 198414-198968
Length = 184
Score = 29.1 bits (62), Expect = 5.3
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = -2
Query: 557 GGGGGGXKXXGGXXXXPPXFXXXXXXXXXXXXXXXXKGAPXGGGGXXXGGG 405
GGGGGG + GG G+ GGGG GGG
Sbjct: 45 GGGGGGGRGGGGGSGGGSGGGGGSGGGGSGGGGSGGGGSGGGGGGGSGGGG 95
>09_04_0745 +
19884868-19886000,19886110-19886309,19886422-19886666,
19886880-19887668
Length = 788
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 382 PPRGV*XXPPPXXXPPPPXGAP 447
PP+ V PPP PPPP P
Sbjct: 258 PPQSVRPPPPPPPPPPPPPMPP 279
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 28.7 bits (61), Expect = 7.0
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +1
Query: 364 GXXXKXPPRGV*XXPPPXXXPPPPXGAP 447
G + PP V PPP PPPP AP
Sbjct: 262 GGPPRPPPPQV-PPPPPQAPPPPPPNAP 288
>02_02_0359 -
9390175-9390416,9390924-9391044,9391069-9391410,
9392400-9392759
Length = 354
Score = 28.7 bits (61), Expect = 7.0
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = -2
Query: 647 PPPPPPXXKXRXXXXXXXXXXXXFXKXKXAGGGGGGXKXXG 525
PPPPPP K GGGGGG G
Sbjct: 42 PPPPPPSQPSAPPAREGRNGYVFVKGLKGGGGGGGGGVGDG 82
>12_01_0347 + 2658545-2659309
Length = 254
Score = 28.3 bits (60), Expect = 9.2
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -3
Query: 553 GGGGXXKXGGGFXPPPXF 500
GGGG GGGF PP F
Sbjct: 85 GGGGGGGGGGGFRPPAIF 102
>06_03_0292 + 19207029-19207940
Length = 303
Score = 28.3 bits (60), Expect = 9.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 507 GGGXXPPPXFXXPPPPPR 560
G G P P PPPPPR
Sbjct: 47 GAGAPPTPPLPPPPPPPR 64
>06_01_0893 -
6834350-6834464,6835042-6835218,6835301-6835350,
6836348-6836416,6836495-6836593,6836681-6836759,
6837604-6837704,6838645-6838713,6839548-6839588,
6839793-6841159,6841472-6841575,6841914-6842351,
6843040-6843567
Length = 1078
Score = 28.3 bits (60), Expect = 9.2
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -2
Query: 776 PPPPXKXKKKXXGGGGXGG 720
PPPP K GGGG GG
Sbjct: 23 PPPPVSKKGGGGGGGGGGG 41
>05_04_0188 -
18883979-18884250,18885046-18885666,18885762-18885887,
18886007-18886265
Length = 425
Score = 28.3 bits (60), Expect = 9.2
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1
Query: 774 PPPXKXKKKXXGGGGXGG 721
PPP KK GGGG GG
Sbjct: 30 PPPSPPHKKLWGGGGGGG 47
>04_04_0887 + 29095087-29096166
Length = 359
Score = 28.3 bits (60), Expect = 9.2
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 361 WGXXXKXPPRGV*XXPPPXXXPPPP 435
WG K P RG PPP PPPP
Sbjct: 119 WGW--KSPRRGNHFSPPPPPPPPPP 141
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 28.3 bits (60), Expect = 9.2
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 488 PPXKKXGGXXKXPPXFXXPPPPPP 559
PP G PP PPPPPP
Sbjct: 336 PPPPPPKGPPPPPPAKGPPPPPPP 359
Score = 28.3 bits (60), Expect = 9.2
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 488 PPXKKXGGXXKXPPXFXXPPPPPP 559
PP G PP PPPPPP
Sbjct: 346 PPPPAKGPPPPPPPKGPSPPPPPP 369
>02_04_0382 - 22501041-22501279,22501717-22501810
Length = 110
Score = 28.3 bits (60), Expect = 9.2
Identities = 16/53 (30%), Positives = 19/53 (35%), Gaps = 6/53 (11%)
Frame = +3
Query: 522 PPPXFXXPPP------PPRXFXFXXXXXXXXXXXXXXSXFXXGGGGGGXXPPP 662
P P + PPP PP + S + GGGG G PPP
Sbjct: 49 PSPEYYDPPPSPDYYDPPHSPDYYDPPPSPDYYDPPPSPYYGGGGGYGKPPPP 101
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,701,417
Number of Sequences: 37544
Number of extensions: 615996
Number of successful extensions: 18332
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 2763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11159
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2659245980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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