Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_N07
(727 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 274 6e-75
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 270 1e-73
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 115 8e-27
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 60 3e-10
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 36 0.004
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 34 0.024
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 32 0.096
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 31 0.13
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 31 0.17
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 31 0.22
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 30 0.39
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 30 0.39
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 0.68
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 1.2
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 28 1.6
SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr ... 27 3.6
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 4.8
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 6.3
SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15 |Sc... 25 8.3
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 274 bits (673), Expect = 6e-75
Identities = 124/166 (74%), Positives = 141/166 (84%)
Frame = -1
Query: 631 PVXSAEKGLPMNSFPLPEITNAXFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 452
P+ SA K S + EITN FEP NQMVKCDPR G+YMA C+LYRGDV+P+DV AA+
Sbjct: 278 PIVSAAKAFH-ESNSVQEITNQCFEPYNQMVKCDPRTGRYMATCLLYRGDVIPRDVQAAV 336
Query: 451 ATIKTKRTIQFVXWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD 272
+IK++RTIQFV WCPTGFK+GI Y+PP VPG +AKV RAVCMLSNTT+IAEAW+RLD
Sbjct: 337 TSIKSRRTIQFVDWCPTGFKIGICYEPPQHVPGSGIAKVNRAVCMLSNTTSIAEAWSRLD 396
Query: 271 HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 134
HKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+DYEEVG D
Sbjct: 397 HKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEEVGQD 442
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 270 bits (662), Expect = 1e-73
Identities = 123/166 (74%), Positives = 139/166 (83%)
Frame = -1
Query: 631 PVXSAEKGLPMNSFPLPEITNAXFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 452
P+ SA K S + EITN FEP NQMVKCDPR G+YMA C+LYRGDV+P+DV AA+
Sbjct: 274 PIVSAAKAFH-ESNSVQEITNQCFEPYNQMVKCDPRAGRYMATCLLYRGDVIPRDVQAAV 332
Query: 451 ATIKTKRTIQFVXWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD 272
TIK KRTIQFV WCPTGFK+GI +PP + G ++AKV RAVCMLSNTT+IAEAW+RLD
Sbjct: 333 TTIKAKRTIQFVDWCPTGFKIGICDRPPQHIEGSEIAKVDRAVCMLSNTTSIAEAWSRLD 392
Query: 271 HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 134
HKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+DYEEVG D
Sbjct: 393 HKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEEVGQD 438
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 115 bits (276), Expect = 8e-27
Identities = 58/154 (37%), Positives = 88/154 (57%), Gaps = 3/154 (1%)
Frame = -1
Query: 586 LPEITNAXFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVXWC 407
+PE+T F+ N MV DPRHG+Y+ L+RG V K+V+ I +++TK + FV W
Sbjct: 286 VPELTQQMFDANNMMVAADPRHGRYLTVAALFRGKVSMKEVDEQIRSVQTKNSAYFVEWI 345
Query: 406 PTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHW 227
P + PP DL + + + N+T+I E + RL +F M+ ++AF+HW
Sbjct: 346 PDNVLKAVCSVPPK-----DL---KMSATFIGNSTSIQEIFRRLGDQFSAMFRRKAFLHW 397
Query: 226 YVGEGMEEGEFSEAR---EDLAALEKDYEEVGMD 134
Y GEGM+E EF+EA DL + + Y+E G+D
Sbjct: 398 YTGEGMDEMEFTEAESNMNDLVSEYQQYQEAGID 431
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 60.1 bits (139), Expect = 3e-10
Identities = 37/140 (26%), Positives = 72/140 (51%), Gaps = 4/140 (2%)
Frame = -1
Query: 556 PANQMVKCDP-RHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVXWCPTGFKVGIN 380
P NQMV +P + +++ + +G+ P DV+ ++ I+ +R F+ W P +V ++
Sbjct: 302 PKNQMVSVNPSKKSCFISILDIIQGEADPADVHKSLLRIRERRYASFIPWGPASIQVALS 361
Query: 379 YQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE- 203
+ P + ++ + ML+N T+IA + R ++D + + AF+ Y E + E
Sbjct: 362 KKSPYIKTNHRVSGL-----MLANHTSIASLFKRTLDQYDRLRKRNAFLEQYKKEAIFED 416
Query: 202 --GEFSEAREDLAALEKDYE 149
EF +R+ +A L +YE
Sbjct: 417 DLNEFDSSRDVVADLINEYE 436
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 36.3 bits (80), Expect = 0.004
Identities = 36/133 (27%), Positives = 55/133 (41%), Gaps = 7/133 (5%)
Frame = -2
Query: 477 YPRM*TRPSLP----SKPSVLSN-SSXGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACC 313
YP P+LP SKP V+ N V P +R + P+ ++P P+ C
Sbjct: 166 YPVSLPSPNLPHQPISKPPVIPNLPKLQVHP-NRLPHPIHNHPYSSPTSYPPPLCPATYC 224
Query: 312 PTPPPSLKLGLALTTSSTSCTPSVLSCTGTSVRVWRRESSP--KPVRTWLPSKRITKKSA 139
P+ PP L A+ SS S ++ + T + + P + WLP + T
Sbjct: 225 PSNPPQLAPATAIAPSSQSSQHKSVNYSVTPSSINNHTAVPLSPTLAVWLPMTQPT---- 280
Query: 138 WTPLKARVREPKS 100
+ P A V +P S
Sbjct: 281 FQPPSANVYQPAS 293
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 33.9 bits (74), Expect = 0.024
Identities = 41/153 (26%), Positives = 59/153 (38%), Gaps = 4/153 (2%)
Frame = -2
Query: 534 AIPVMASTWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSXGVQPVSRSVST-TSHPPWC 358
+IP ++ V TV + + P P+ S SS + S S +T TS PP
Sbjct: 290 SIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTG 349
Query: 357 PEATWPRFNVP---SACCPTPPPSLKLGLALTTSSTSCTPSVLSCTGTSVRVWRRESSPK 187
T VP ++ TPPP T+SS + S SCT TS + +S
Sbjct: 350 NSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLLSTST-SCT-TSTSIPPTGNSTT 407
Query: 186 PVRTWLPSKRITKKSAWTPLKARVREPKSTKPV 88
PV +P + T P ++ PV
Sbjct: 408 PVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPV 440
Score = 26.2 bits (55), Expect = 4.8
Identities = 25/76 (32%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Frame = -2
Query: 435 SVLSNSSXGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKL----GLALTT 268
S +S + P S S ++ P P T P + S P PP S L T
Sbjct: 169 STSCTTSTSIPPTGGSSSLST--PITP--TVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT 224
Query: 267 SSTSCTPSVLSCTGTS 220
+STSCT S TG S
Sbjct: 225 TSTSCTTSTSIPTGGS 240
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 31.9 bits (69), Expect = 0.096
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = -2
Query: 327 PSACCPTPPPSLKLGLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTWLPS--KRI 154
P+ + P + G+ TS TS T S S++ S+P P W P+
Sbjct: 134 PATSSFSDPKAFSAGVPKFTSDTSSTVSSTPSLNHSLQNSMPPSTPTPPPVWAPTIVSSA 193
Query: 153 TKKSAWTPLKARVREPKSTK 94
S+ TP+ V EP+ TK
Sbjct: 194 LGTSSKTPVYVVVDEPRFTK 213
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 31.5 bits (68), Expect = 0.13
Identities = 22/85 (25%), Positives = 35/85 (41%)
Frame = -2
Query: 444 SKPSVLSNSSXGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKLGLALTTS 265
S P+ S + PVS + T + PP A R N A P + + A T S
Sbjct: 1001 SMPAAKSKPAPMANPVSTAQQTQNRPP--APAMQARPNTTQAAAPVTSTTTTIKQATTVS 1058
Query: 264 STSCTPSVLSCTGTSVRVWRRESSP 190
++ PS ++ +S + S+P
Sbjct: 1059 ASKPAPSTVTSAASSPSNISKPSAP 1083
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 31.1 bits (67), Expect = 0.17
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = -2
Query: 435 SVLSNSSXGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKLGLALTTSSTS 256
S+L +S+ P+S + STT+ T ++ TP S+ + T +STS
Sbjct: 280 SLLPSSTPSSTPLSSANSTTATSASSTPLTSVNSTTTTSASSTPLSSVSSANSTTATSTS 339
Query: 255 CTP--SVLSCTGTS 220
TP SV S T TS
Sbjct: 340 STPLSSVNSTTATS 353
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 30.7 bits (66), Expect = 0.22
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -2
Query: 489 VVTSYPRM*TRPSLPSKPSVLSNSSXGVQPVSRSVSTTSHPPWCP 355
VV P + RP++P P LS V PV+ V + PP P
Sbjct: 552 VVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQPPVAP 596
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 29.9 bits (64), Expect = 0.39
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -2
Query: 351 ATWPRFNVPSACCPTPPPSLKLGL-ALTTSSTSCTPSVLS 235
AT R+N + P P P G+ A+ T++TS TP LS
Sbjct: 1608 ATHSRYNASFSSSPPPQPGNSSGMSAMNTNTTSTTPVSLS 1647
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 29.9 bits (64), Expect = 0.39
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -2
Query: 351 ATWPRFNVPSACCPTPPPSLKLGL-ALTTSSTSCTPSVLS 235
AT R+N + P P P G+ A+ T++TS TP LS
Sbjct: 1608 ATHSRYNASFSSSPPPQPGNSSGMSAMNTNTTSTTPVSLS 1647
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.1 bits (62), Expect = 0.68
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -2
Query: 447 PSKPSVLSNSSXGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKLG 283
P+ P + S P + S TS PP + P + P + P+ PPSL +G
Sbjct: 389 PAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPP-SAPPSLPPSAPPSLPMG 442
Score = 25.4 bits (53), Expect = 8.3
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = -2
Query: 384 STTSHPPWCPE--ATWPRFNVPSACCPTPPP 298
++TS PP P ++ P VPS P PPP
Sbjct: 225 TSTSAPPIPPSIPSSRPPERVPSLSAPAPPP 255
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.3 bits (60), Expect = 1.2
Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 3/104 (2%)
Frame = -2
Query: 483 TSYPRM*TRPSLP-SKPSVLSNSSX--GVQPVSRSVSTTSHPPWCPEATWPRFNVPSACC 313
TS P PS P SKP S ++ V PV + +S+ + P P A P VPS
Sbjct: 983 TSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPK-LSSKAPPVPLPSADAPPIPVPSTAP 1041
Query: 312 PTPPPSLKLGLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPV 181
P P P+ + ++S P + + + S PV
Sbjct: 1042 PVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPV 1085
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 27.9 bits (59), Expect = 1.6
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +2
Query: 449 SDGRVHILGYDVTTVQHTASHVLAMTGIAFHHLVGGLEXCVCDLGQRKAV 598
S G +LGY ++ A++V+A + + HL+ G D + K +
Sbjct: 407 SAGLTSLLGYHLSVKTPQATYVVARSIVMLDHLIDGYSMAFPDFSESKGL 456
>SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 26.6 bits (56), Expect = 3.6
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = -2
Query: 393 RSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKLGLALTTSSTSCTPSVLS 235
++ S T+ P P ++ FN PSA P P++ + +T TPS S
Sbjct: 453 KAPSATTDKPSPPVSSIFSFNAPSAASTKPSPAVSSTFSFNAPTT--TPSATS 503
>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 628
Score = 26.2 bits (55), Expect = 4.8
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = -2
Query: 453 SLPSKPSV---LSNSSXGVQPVSRSVSTTSHP 367
+LP KPS+ +++S V+P S STTS+P
Sbjct: 5 TLPPKPSISPSIASSFPTVKPFSSQNSTTSNP 36
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.8 bits (54), Expect = 6.3
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Frame = -2
Query: 444 SKPSVLSNSSXGVQP--VSRSVSTTSHPPWC--PEATWPRFNVPSACCPTPPP 298
S P+ S+ GV VS S S PP P A P ++PS P PPP
Sbjct: 141 SAPASQEPSASGVNAPTVSAPNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPP 193
>SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1063
Score = 25.4 bits (53), Expect = 8.3
Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 2/90 (2%)
Frame = -2
Query: 486 VTSYPRM*TRPSLP--SKPSVLSNSSXGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACC 313
+T+ R T+P+ P S+ +N + S S+ S P +A +VP +
Sbjct: 498 LTNKARNATQPTQPPVSQVDYSNNLPPNLDTSSTFRSSASPPSAFTKAGNEALSVPLSGA 557
Query: 312 PTPPPSLKLGLALTTSSTSCTPSVLSCTGT 223
S LA SS S +L C GT
Sbjct: 558 RNTAASRPTNLAAGNSSASIVQQLLECGGT 587
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,852,907
Number of Sequences: 5004
Number of extensions: 61954
Number of successful extensions: 224
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 221
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 341222980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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