Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_N04
         (773 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071278-1|AAL48900.1|  347|Drosophila melanogaster RE30702p pro...    32   1.0  

>AY071278-1|AAL48900.1|  347|Drosophila melanogaster RE30702p
           protein.
          Length = 347

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = -3

Query: 399 NLVLNKHTGLAMNYHFD-CNNNKKFLCDS*LLNDATNILNQHY 274
           NL  N H  L  N H++ C NN   LC +   N  TN  N  Y
Sbjct: 236 NLCTNNHNNLCTNNHYNLCTNNHNNLCTNNHYNLCTNNHNHVY 278



 Score = 29.9 bits (64), Expect = 4.1
 Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
 Frame = -3

Query: 399 NLVLNKHTGLAMNYHFD-CNNNKKFLCDS*LLNDATNILNQHY 274
           NL  N H  L  N H++ C NN   LC +   N      N HY
Sbjct: 212 NLCTNNHNNLCTNNHYNLCTNNHNNLCTN---NHNNLCTNNHY 251


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,107,534
Number of Sequences: 53049
Number of extensions: 674484
Number of successful extensions: 1544
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1543
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3581842374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)