Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_M21
(759 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 34 0.11
01_07_0239 + 42222024-42222133,42222220-42222301,42222396-422224... 31 0.75
08_02_0252 + 14868530-14868757 29 3.0
03_05_1153 + 30787574-30787608,30787982-30788089,30788651-307886... 29 4.0
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 29 5.3
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 29 5.3
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 5.3
04_01_0083 + 904473-905167,905247-905347,905902-905994,907322-90... 28 7.0
07_03_1573 + 27829967-27830338,27830821-27831510,27831594-278317... 28 9.3
07_03_1136 + 24218601-24218734,24218769-24219906 28 9.3
04_03_0801 - 19828175-19828770,19828913-19828994 28 9.3
01_01_0082 + 625198-625719 28 9.3
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 34.3 bits (75), Expect = 0.11
Identities = 25/94 (26%), Positives = 27/94 (28%)
Frame = -1
Query: 714 PPPPXXXKXFXSPPPPXGXXXXXXXXKKKXXXPPXXXXXXXPPXXXKXFFFXKXXXXXXX 535
PPPP +PPPP K PP PP K
Sbjct: 314 PPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKG------------ 361
Query: 534 XXXGXXKKKXXPPPXGEXTPXXPPPXXGGGXXPP 433
PPP G+ PPP GG PP
Sbjct: 362 -----PSPPPPPPPGGKKGGPPPPPPKGGASRPP 390
>01_07_0239 +
42222024-42222133,42222220-42222301,42222396-42222486,
42222702-42222814,42222912-42222984,42223080-42223178,
42223201-42223406,42223693-42223832,42223912-42223969,
42224067-42224137,42224207-42224741
Length = 525
Score = 31.5 bits (68), Expect = 0.75
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2
Query: 437 GXXPPPXXGGGXXGVXSPXGGG 502
G PPP GGG G P GGG
Sbjct: 461 GRGPPPYPGGGMGGAGGPRGGG 482
>08_02_0252 + 14868530-14868757
Length = 75
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = +2
Query: 83 LYRAQHPARNGSRLQTIPSPEHRTELXISGPSEAVNARFLRKKNPISIRXSGXSKM 250
+ R QH A+N R + + EH+ + G A R LR + I IR G +M
Sbjct: 20 MLRRQHSAQNECRREGVDRLEHKPPECVKGKENARPQRLLRVR--IRIRREGVLRM 73
>03_05_1153 +
30787574-30787608,30787982-30788089,30788651-30788689,
30789181-30789184,30789496-30789580,30789609-30790321
Length = 327
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/73 (24%), Positives = 22/73 (30%)
Frame = -1
Query: 678 PPPPXGXXXXXXXXKKKXXXPPXXXXXXXPPXXXKXFFFXKXXXXXXXXXXGXXKKKXXP 499
PPPP KK+ PP P + KK+ P
Sbjct: 173 PPPPPAPEPEPEPPKKEEPQPPPPKEEEKPEPPPAVIIV-EPPAPAPEPEPEPPKKEPPP 231
Query: 498 PPXGEXTPXXPPP 460
PP + P PPP
Sbjct: 232 PPPPKQEPCPPPP 244
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = -2
Query: 503 PPPRX-GKXPPXXPPLXXGGXXXPP 432
PPPR G PP PP GG PP
Sbjct: 616 PPPRPPGAPPPPPPPGKPGGPPPPP 640
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = -2
Query: 503 PPPRX-GKXPPXXPPLXXGGXXXPP 432
PPPR G PP PP GG PP
Sbjct: 921 PPPRPPGAPPPPPPPGKPGGPPPPP 945
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 28.7 bits (61), Expect = 5.3
Identities = 20/94 (21%), Positives = 28/94 (29%)
Frame = -1
Query: 714 PPPPXXXKXFXSPPPPXGXXXXXXXXKKKXXXPPXXXXXXXPPXXXKXFFFXKXXXXXXX 535
PPP F +PPPP + + P PP + ++ +
Sbjct: 42 PPPQGAPPPFLAPPPPP-PPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYY--QPPPPPPP 98
Query: 534 XXXGXXKKKXXPPPXGEXTPXXPPPXXGGGXXPP 433
+ PPP P PPP PP
Sbjct: 99 YGVNSSQPPPPPPPPPSPPPSAPPPPPPPPTQPP 132
>04_01_0083 +
904473-905167,905247-905347,905902-905994,907322-907968
Length = 511
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -1
Query: 516 KKKXXPPPXGEXTPXXPPPXXGG 448
+KK PPP TP PPP G
Sbjct: 39 RKKKPPPPPLSPTPRTPPPAGSG 61
>07_03_1573 +
27829967-27830338,27830821-27831510,27831594-27831781,
27832286-27832318,27832364-27832605,27833178-27833320,
27833649-27833825,27834104-27834256,27834639-27834694,
27834998-27835157,27835301-27835348
Length = 753
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1
Query: 501 PPPXGEXTPXXPPPXXGGGXXPP 433
PPP TP PPP G G P
Sbjct: 38 PPPPRRRTPPPPPPGSGPGPQRP 60
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 27.9 bits (59), Expect = 9.3
Identities = 25/100 (25%), Positives = 26/100 (26%)
Frame = +2
Query: 434 GGXXPPPXXGGGXXGVXSPXGGGXXFFFXXPXXXXXXXXXXXXKKXXXXXXGGXXXXXXX 613
GG PP GGG P G G P + GG
Sbjct: 103 GGGARPPGGGGGGGPPSLPPGAGGGGGARPPAPGGGGGGGAPRRVLGGGGGGGALARPPG 162
Query: 614 GGXXXFFFXXXXXKXXPXGGGGXKNXFXXXGGGGXPXXXP 733
GG GGGG GGGG P P
Sbjct: 163 GGRGG---ALGRPPGGGGGGGGPGRAPGGGGGGGGPGRAP 199
>04_03_0801 - 19828175-19828770,19828913-19828994
Length = 225
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 525 GXXKKKXXPPPXGEXTPXXPPPXXGGG 445
G KK PP P PPP GGG
Sbjct: 185 GGCKKPCCSPPPCPWQPVCPPPPCGGG 211
>01_01_0082 + 625198-625719
Length = 173
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 501 PPPXGEXTPXXPPPXXGGGXXP 436
PPP T PPP GGG P
Sbjct: 84 PPPTTPSTNCPPPPYGGGGYNP 105
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,427,049
Number of Sequences: 37544
Number of extensions: 386222
Number of successful extensions: 1792
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1565
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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