Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_M16
(776 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 37 0.018
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 37 0.018
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 31 0.70
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.2
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.2
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.2
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 30 1.6
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 30 2.1
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 2.8
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 2.8
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 2.8
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical pr... 29 3.7
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 29 3.7
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 3.7
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 4.9
AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen prot... 29 4.9
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 28 6.5
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 28 6.5
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 36.7 bits (81), Expect = 0.018
Identities = 28/101 (27%), Positives = 30/101 (29%)
Frame = +2
Query: 464 PPXXPLXXXTXPXPPPXNXXXPPFSPXXTPPXAXQXXPXXRXPXPPXRPXLXLXXXXXSX 643
PP P P PPP P +P PP + P P P P
Sbjct: 261 PPVPPPPPSVTPMPPPM-PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTP------GPPGM 313
Query: 644 PXXXXXXPXXXXXXPGRXGXPXXPHXPXGSXSPXGXPXXCP 766
P P PG G P P P G P G P P
Sbjct: 314 PGMPPPPPPSRFGPPGMGGMPPPP--PPGMRYPGGMPPPPP 352
Score = 33.1 bits (72), Expect = 0.23
Identities = 21/73 (28%), Positives = 21/73 (28%), Gaps = 2/73 (2%)
Frame = +2
Query: 398 PSPPRXXLXPXXRXXXXAMXXXPPXX--PLXXXTXPXPPPXNXXXPPFSPXXTPPXAXQX 571
P PP P PP P P PPP P P PP
Sbjct: 299 PPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSA 358
Query: 572 XPXXRXPXPPXRP 610
P P PP RP
Sbjct: 359 GPGMYPPPPPSRP 371
Score = 31.9 bits (69), Expect = 0.53
Identities = 28/123 (22%), Positives = 29/123 (23%), Gaps = 4/123 (3%)
Frame = +2
Query: 398 PSPPRXXLXPXXRXXXXAMXXXPPXXPLXXXTXPXPPPX--NXXXPPFSPXXTPPXAXQ- 568
P PP P M PP P P PPP PP P PP
Sbjct: 265 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSR 324
Query: 569 -XXPXXRXPXPPXRPXLXLXXXXXSXPXXXXXXPXXXXXXPGRXGXPXXPHXPXGSXSPX 745
P PP P + P P P P G P
Sbjct: 325 FGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPP 384
Query: 746 GXP 754
P
Sbjct: 385 PPP 387
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 36.7 bits (81), Expect = 0.018
Identities = 28/101 (27%), Positives = 30/101 (29%)
Frame = +2
Query: 464 PPXXPLXXXTXPXPPPXNXXXPPFSPXXTPPXAXQXXPXXRXPXPPXRPXLXLXXXXXSX 643
PP P P PPP P +P PP + P P P P
Sbjct: 271 PPVPPPPPSVTPMPPPM-PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTP------GPPGM 323
Query: 644 PXXXXXXPXXXXXXPGRXGXPXXPHXPXGSXSPXGXPXXCP 766
P P PG G P P P G P G P P
Sbjct: 324 PGMPPPPPPSRFGPPGMGGMPPPP--PPGMRYPGGMPPPPP 362
Score = 33.1 bits (72), Expect = 0.23
Identities = 21/73 (28%), Positives = 21/73 (28%), Gaps = 2/73 (2%)
Frame = +2
Query: 398 PSPPRXXLXPXXRXXXXAMXXXPPXX--PLXXXTXPXPPPXNXXXPPFSPXXTPPXAXQX 571
P PP P PP P P PPP P P PP
Sbjct: 309 PPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSA 368
Query: 572 XPXXRXPXPPXRP 610
P P PP RP
Sbjct: 369 GPGMYPPPPPSRP 381
Score = 31.9 bits (69), Expect = 0.53
Identities = 28/123 (22%), Positives = 29/123 (23%), Gaps = 4/123 (3%)
Frame = +2
Query: 398 PSPPRXXLXPXXRXXXXAMXXXPPXXPLXXXTXPXPPPX--NXXXPPFSPXXTPPXAXQ- 568
P PP P M PP P P PPP PP P PP
Sbjct: 275 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSR 334
Query: 569 -XXPXXRXPXPPXRPXLXLXXXXXSXPXXXXXXPXXXXXXPGRXGXPXXPHXPXGSXSPX 745
P PP P + P P P P G P
Sbjct: 335 FGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPP 394
Query: 746 GXP 754
P
Sbjct: 395 PPP 397
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 31.5 bits (68), Expect = 0.70
Identities = 23/84 (27%), Positives = 25/84 (29%), Gaps = 2/84 (2%)
Frame = +2
Query: 311 APERRGWRAAXXLXPXXXLXXXGXXRXDRPSPPRXXLXPXXRXXXXAMXXXPPXXP--LX 484
AP+ A+ P G P PPR P R P P
Sbjct: 112 APQHGDHEASPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRP 171
Query: 485 XXTXPXPPPXNXXXPPFSPXXTPP 556
T P P P N P SP PP
Sbjct: 172 PRTPPSPEPRNPPRTPPSPIPPPP 195
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +2
Query: 497 PXPPPXNXXXPPFSPXXTPPXAXQXXPXXRXPXPPXRPXL 616
P PPP SP PP P R P PP RP +
Sbjct: 124 PPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSP-PPRRPPM 162
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/73 (27%), Positives = 21/73 (28%), Gaps = 2/73 (2%)
Frame = +2
Query: 398 PSPPRXXLXPXXRXXXXAMXXXPPXXPLXXXTXPX--PPPXNXXXPPFSPXXTPPXAXQX 571
P PP P + PP P T P PPP P SP PP
Sbjct: 122 PPPP----PPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPS 177
Query: 572 XPXXRXPXPPXRP 610
P P P
Sbjct: 178 PEPRNPPRTPPSP 190
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/86 (27%), Positives = 26/86 (30%)
Frame = +2
Query: 497 PXPPPXNXXXPPFSPXXTPPXAXQXXPXXRXPXPPXRPXLXLXXXXXSXPXXXXXXPXXX 676
P PPP PP + +PP P PP R S P P
Sbjct: 237 PPPPPPPKGSPPLAGSGSPP-----PPPAAGSPPPPRTGSPPPPPTGSPP----PPPAGG 287
Query: 677 XXXPGRXGXPXXPHXPXGSXSPXGXP 754
P R G P P P GS P
Sbjct: 288 SPPPPRAGSPPPPPPPRGSPPTGSLP 313
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/86 (27%), Positives = 26/86 (30%)
Frame = +2
Query: 497 PXPPPXNXXXPPFSPXXTPPXAXQXXPXXRXPXPPXRPXLXLXXXXXSXPXXXXXXPXXX 676
P PPP PP + +PP P PP R S P P
Sbjct: 258 PPPPPPPKGSPPLAGSGSPP-----PPPAAGSPPPPRTGSPPPPPTGSPP----PPPAGG 308
Query: 677 XXXPGRXGXPXXPHXPXGSXSPXGXP 754
P R G P P P GS P
Sbjct: 309 SPPPPRAGSPPPPPPPRGSPPTGSLP 334
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/86 (27%), Positives = 26/86 (30%)
Frame = +2
Query: 497 PXPPPXNXXXPPFSPXXTPPXAXQXXPXXRXPXPPXRPXLXLXXXXXSXPXXXXXXPXXX 676
P PPP PP + +PP P PP R S P P
Sbjct: 243 PPPPPPPKGSPPLAGSGSPP-----PPPAAGSPPPPRTGSPPPPPTGSPP----PPPAGG 293
Query: 677 XXXPGRXGXPXXPHXPXGSXSPXGXP 754
P R G P P P GS P
Sbjct: 294 SPPPPRAGSPPPPPPPRGSPPTGSLP 319
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 30.3 bits (65), Expect = 1.6
Identities = 24/72 (33%), Positives = 24/72 (33%)
Frame = -3
Query: 609 GRXGGXGXRXXGXXXXALGGVXXGEXGGXXXLXGGGXGXVXXXRGXXGGXXXMAXXXXRX 430
GR GG G G GG G GG GGG G G GG
Sbjct: 67 GRGGGWGNNGGGGNWGGNGG--GGNGGGGR---GGGGGGGGGRGGGGGGRGGGGGGGGGR 121
Query: 429 XGXRXXRGGDGR 394
G RGG GR
Sbjct: 122 GGGGGGRGGGGR 133
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/83 (24%), Positives = 22/83 (26%)
Frame = +2
Query: 506 PPXNXXXPPFSPXXTPPXAXQXXPXXRXPXPPXRPXLXLXXXXXSXPXXXXXXPXXXXXX 685
PP PF P PP P PP + P P
Sbjct: 176 PPSGGPPGPFGPSGAPPSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGA 235
Query: 686 PGRXGXPXXPHXPXGSXSPXGXP 754
P G P P P G+ G P
Sbjct: 236 P-PSGGPPGPFDPSGAPPSGGPP 257
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/97 (22%), Positives = 25/97 (25%)
Frame = +2
Query: 464 PPXXPLXXXTXPXPPPXNXXXPPFSPXXTPPXAXQXXPXXRXPXPPXRPXLXLXXXXXSX 643
P P PP PF+P PP P PP +
Sbjct: 207 PSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAP 266
Query: 644 PXXXXXXPXXXXXXPGRXGXPXXPHXPXGSXSPXGXP 754
P P P G P P P G+ G P
Sbjct: 267 PSGGPPGPFDPSGAP-PSGGPPGPFDPSGAPPSGGPP 302
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/97 (22%), Positives = 25/97 (25%)
Frame = +2
Query: 464 PPXXPLXXXTXPXPPPXNXXXPPFSPXXTPPXAXQXXPXXRXPXPPXRPXLXLXXXXXSX 643
P P PP PF+P PP P PP +
Sbjct: 402 PSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAP 461
Query: 644 PXXXXXXPXXXXXXPGRXGXPXXPHXPXGSXSPXGXP 754
P P P G P P P G+ G P
Sbjct: 462 PSGGPPGPFNPSGAP-PSGGPPGPFDPSGAPPSGGPP 497
Score = 29.1 bits (62), Expect = 3.7
Identities = 22/97 (22%), Positives = 24/97 (24%)
Frame = +2
Query: 464 PPXXPLXXXTXPXPPPXNXXXPPFSPXXTPPXAXQXXPXXRXPXPPXRPXLXLXXXXXSX 643
P P PP PF P PP P PP +
Sbjct: 192 PSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAP 251
Query: 644 PXXXXXXPXXXXXXPGRXGXPXXPHXPXGSXSPXGXP 754
P P P G P P P G+ G P
Sbjct: 252 PSGGPPGPFNPSGAP-PSGGPPGPFDPSGAPPSGGPP 287
Score = 29.1 bits (62), Expect = 3.7
Identities = 22/97 (22%), Positives = 24/97 (24%)
Frame = +2
Query: 464 PPXXPLXXXTXPXPPPXNXXXPPFSPXXTPPXAXQXXPXXRXPXPPXRPXLXLXXXXXSX 643
P P PP PF P PP P PP +
Sbjct: 312 PSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAP 371
Query: 644 PXXXXXXPXXXXXXPGRXGXPXXPHXPXGSXSPXGXP 754
P P P G P P P G+ G P
Sbjct: 372 PSGGPPGPFDPSGAP-PSGGPPGPFDPSGAPPSGGPP 407
Score = 29.1 bits (62), Expect = 3.7
Identities = 20/83 (24%), Positives = 23/83 (27%)
Frame = +2
Query: 506 PPXNXXXPPFSPXXTPPXAXQXXPXXRXPXPPXRPXLXLXXXXXSXPXXXXXXPXXXXXX 685
PP PF+P PP P PP + P P
Sbjct: 401 PPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGA 460
Query: 686 PGRXGXPXXPHXPXGSXSPXGXP 754
P G P P P G+ G P
Sbjct: 461 P-PSGGPPGPFNPSGAPPSGGPP 482
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/83 (24%), Positives = 22/83 (26%)
Frame = +2
Query: 506 PPXNXXXPPFSPXXTPPXAXQXXPXXRXPXPPXRPXLXLXXXXXSXPXXXXXXPXXXXXX 685
PP PF P PP P PP + P P
Sbjct: 386 PPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGA 445
Query: 686 PGRXGXPXXPHXPXGSXSPXGXP 754
P G P P P G+ G P
Sbjct: 446 P-PSGGPPGPFNPSGAPPSGGPP 467
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = +2
Query: 464 PPXXPLXXXTXPXPPPXNXXXPPFSPXXTPPXAXQXXPXXRXPXPPXRP 610
PP P P PPP P PP P P PP P
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Frame = +2
Query: 464 PPXXPLXXXTX-PXPPPXNXXXPPFSPXXTPPXAXQXXPXXRXPXPPXRP 610
PP L T P PPP PP S PP P P PP P
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPP----PPPPGGCPPPPPPP 775
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = +2
Query: 464 PPXXPLXXXTXPXPPPXNXXXPPFSPXXTPPXAXQXXPXXRXPXPPXRP 610
PP P P PPP P PP P P PP P
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Frame = +2
Query: 464 PPXXPLXXXTX-PXPPPXNXXXPPFSPXXTPPXAXQXXPXXRXPXPPXRP 610
PP L T P PPP PP S PP P P PP P
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPP----PPPPGGCPPPPPPP 775
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = +2
Query: 464 PPXXPLXXXTXPXPPPXNXXXPPFSPXXTPPXAXQXXPXXRXPXPPXRP 610
PP P P PPP P PP P P PP P
Sbjct: 299 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 347
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Frame = +2
Query: 464 PPXXPLXXXTX-PXPPPXNXXXPPFSPXXTPPXAXQXXPXXRXPXPPXRP 610
PP L T P PPP PP S PP P P PP P
Sbjct: 313 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPP----PPPPGGCPPPPPPP 358
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = +2
Query: 497 PXPPPXNXXXPPFSPXXTPPXAXQXXPXXRXPXPPXRP 610
P PPP P P TP + P P PP P
Sbjct: 324 PPPPPPMKLDPSPQPAATPVEITEIPPIISPPAPPPPP 361
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/49 (26%), Positives = 15/49 (30%)
Frame = +2
Query: 464 PPXXPLXXXTXPXPPPXNXXXPPFSPXXTPPXAXQXXPXXRXPXPPXRP 610
PP P+ P P P +PP P P PP P
Sbjct: 325 PPPPPMKLDPSPQPAATPVEITEIPPIISPPAPPPPPPPPPPPPPPQTP 373
>Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical
protein T23F1.5 protein.
Length = 1262
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/47 (29%), Positives = 16/47 (34%)
Frame = +2
Query: 467 PXXPLXXXTXPXPPPXNXXXPPFSPXXTPPXAXQXXPXXRXPXPPXR 607
P PL P PPP + +P PP P P P R
Sbjct: 539 PAPPLINPYIPPPPPPHPEEEYATPYTVPPGKQPFPPFGEGPATPPR 585
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Frame = -3
Query: 609 GRXGGXGXRXXGXXXXAL-GGVXXGEXGGXXXLXGGGXGXVXXXRGXXGG 463
GR GG G G GG G+ GG G G G G GG
Sbjct: 813 GRGGGFGGTGRGRGGGVFGGGGRGGDFGGSGNFGGSGGGGSFGGSGGGGG 862
>Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical
protein B0285.1 protein.
Length = 730
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +2
Query: 503 PPPXNXXXPPFSPXXTPPXAXQXXPXXRXPXPPXRP 610
PPP + PF P + P P + PP RP
Sbjct: 189 PPPPSFNINPFQPMFSQPPPPPLPPNSQFMTPPPRP 224
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical
protein F07C4.7 protein.
Length = 180
Score = 29.1 bits (62), Expect = 3.7
Identities = 22/71 (30%), Positives = 22/71 (30%), Gaps = 2/71 (2%)
Frame = -3
Query: 609 GRXGGXGXRXXGXXXXALGGVXXGEXGGXXXLX--GGGXGXVXXXRGXXGGXXXMAXXXX 436
GR GG G L G G GG GGG G RG GG
Sbjct: 77 GRGGGRGGNGGFGDNGGLRGGNGGGRGGNGGFDDNGGGRGGNGGGRGGTGGFGDNGGGRG 136
Query: 435 RXXGXRXXRGG 403
G R GG
Sbjct: 137 GNGGGRGGNGG 147
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = +2
Query: 464 PPXXPLXXXTXPXPPPXNXXXPPFSPXXTPPXAXQXXPXXRXPXPPXRP 610
PP P PPP PP P P P P PP P
Sbjct: 27 PPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCP 75
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = +2
Query: 464 PPXXPLXXXTXPXPPPXNXXXPPFSPXXTPPXAXQXXPXXRXPXPPXRP 610
PP PL P PP PP P PP P P P P
Sbjct: 40 PP--PLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYSP 86
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/57 (29%), Positives = 18/57 (31%), Gaps = 6/57 (10%)
Frame = +2
Query: 464 PPXXPLXXXTXPXPPPXNXXXPP------FSPXXTPPXAXQXXPXXRXPXPPXRPXL 616
PP P+ P PPP PP P PP P P P P L
Sbjct: 84 PPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPPRPKTPVNPAL 140
>AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen protein
141 protein.
Length = 314
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +2
Query: 686 PGRXGXPXXPHXPXGSXSPXGXPXXCP 766
PG+ G P P P S +P G CP
Sbjct: 250 PGQAGTPGTPGAPGNSGAPGGDAAYCP 276
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = +2
Query: 464 PPXXPLXXXTXPXPPPXNXXXPPFSPXXTPPXAXQXXPXXRXPXPPXRP 610
PP P P P P PP PP P P PP P
Sbjct: 112 PPPAPYPQHAVPAPAPYQQQPPP-----PPPPPHYPPPPPHYPPPPPAP 155
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 28.3 bits (60), Expect = 6.5
Identities = 23/95 (24%), Positives = 26/95 (27%)
Frame = -3
Query: 747 PXGXXEPXGXWGXXGXPXRPGXXXXXXGXXXXXXGXXXXXQXRXXXGRXGGXGXRXXGXX 568
P G P G G G P +PG G + G G G
Sbjct: 276 PPGPPGPPGNDGQPGGPGQPGGPGQDGGPGTDAAYCPCPPRTPAGGGGGGDFPAGGGGGG 335
Query: 567 XXALGGVXXGEXGGXXXLXGGGXGXVXXXRGXXGG 463
GG + GG GG G G GG
Sbjct: 336 YSTGGGGGRADSGGAAGGAGGAGGYSGGGGGGGGG 370
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,840,897
Number of Sequences: 27780
Number of extensions: 145177
Number of successful extensions: 1878
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1686
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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