Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_M08
         (708 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY846632-1|AAW31598.1|  412|Anopheles gambiae SAGLIN protein.          26   1.3  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   4.1  
L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.     24   5.4  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   9.4  

>AY846632-1|AAW31598.1|  412|Anopheles gambiae SAGLIN protein.
          Length = 412

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +1

Query: 382 VTGGHDERVLVSCRFIEVVPITLHVR*LRAPASKQIRKQASFRGG 516
           VT   D+R+L   RF+  +P     R L   A ++++K+ S R G
Sbjct: 198 VTIYQDQRLLNLMRFVRDIPSVEERRSLYQLAQREVQKRPSQRDG 242


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 17/60 (28%), Positives = 27/60 (45%)
 Frame = +3

Query: 342  VDCFPFCPQDRECSYRRPR*EGSRVVPLYRSGTNNTTRSMTSGSSKQANKKASKFPWGKK 521
            VD F + P DR+C+  R   +  +     ++ T +T R    GS  + N+  S   W  K
Sbjct: 1443 VDGFCYSPSDRQCAEERE--QAEQRFERQKNHTKDTIRQ--QGSLVRWNEPLSVSHWRSK 1498


>L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.
          Length = 511

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 5/68 (7%)
 Frame = -3

Query: 271 SPFSSNPSLATKGSTSKLTLRHSPLSFSPDLLSGS--RFRSGGRFCEA---RLLLGFVLA 107
           SP + N  +     +     R+ P+SF  D  SGS   F    R C A   RL +  ++ 
Sbjct: 65  SPVNENIVIRLADGSRPWWERYQPISFKLDTRSGSEAEFADMSRRCNAAGVRLYVDIIIN 124

Query: 106 TSSGLSPV 83
                 PV
Sbjct: 125 HMGATQPV 132


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = -2

Query: 125 ARVRVSNIVRFEPREL 78
           AR+ V+NI +FE REL
Sbjct: 794 ARIGVANIRQFEEREL 809


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 641,985
Number of Sequences: 2352
Number of extensions: 13716
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)