Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_M03
(873 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 45 1e-05
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 45 1e-05
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 35 0.017
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 33 0.040
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 32 0.093
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 32 0.12
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 32 0.12
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 1.5
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 45.2 bits (102), Expect = 1e-05
Identities = 41/161 (25%), Positives = 48/161 (29%), Gaps = 3/161 (1%)
Frame = +2
Query: 374 SPXPTXPPPXPLHXTXXXXPXPXXXAXPXXPPXXXXXSVNXPPXPXPXXXXGSSPXXXPP 553
S P PPP + P + P PP S P P S+P PP
Sbjct: 334 SSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNP-PAPP 392
Query: 554 PKTPAXXPIXFXXSXSKHXTHXXQTPTPPPXXXXXXXPXXXPQTARP--PXXHPXIXP-P 724
P P + T PTPP P P +A P P P P P
Sbjct: 393 PAIPGRSAPALPPLGNASRTSTPPVPTPP--SLPPSAPPSLPPSAPPSLPMGAPAAPPLP 450
Query: 725 PPXXXPPXVPXSXXSXXPXLPXIRSXXXPIQNSXPXXPXES 847
P P +P + P LP P P P S
Sbjct: 451 PSAPIAPPLPAGMPA-APPLPPAAPAPPPAPAPAPAAPVAS 490
Score = 36.7 bits (81), Expect = 0.004
Identities = 36/156 (23%), Positives = 41/156 (26%), Gaps = 5/156 (3%)
Frame = +2
Query: 326 PXKPXGGXXPXPXNHXSPXPTXPPPXPLHXTXXXXPXPXXXAX-----PXXPPXXXXXSV 490
P G P P S P PPP + P P + P PP S
Sbjct: 343 PRSNAAGSIPLPPQGRSAPP--PPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSA 400
Query: 491 NXPPXPXPXXXXGSSPXXXPPPKTPAXXPIXFXXSXSKHXTHXXQTPTPPPXXXXXXXPX 670
P P S+P PP P P S P P P
Sbjct: 401 PALP-PLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPL 459
Query: 671 XXPQTARPPXXHPXIXPPPPXXXPPXVPXSXXSXXP 778
A PP PPP P P + + P
Sbjct: 460 PAGMPAAPPLPPAAPAPPPAPAPAPAAPVASIAELP 495
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 45.2 bits (102), Expect = 1e-05
Identities = 36/140 (25%), Positives = 43/140 (30%), Gaps = 3/140 (2%)
Frame = +2
Query: 377 PXPTXP-PPXPLHXTXXXXPXPXXXAXPXXPPXXXXXSVNXPPXPXPXXXXGS--SPXXX 547
P P+ PP P+ T P P + P P PP P P S +P
Sbjct: 1025 PLPSADAPPIPVPSTAPPVPIPT--STPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGA 1082
Query: 548 PPPKTPAXXPIXFXXSXSKHXTHXXQTPTPPPXXXXXXXPXXXPQTARPPXXHPXIXPPP 727
PP P+ P S + PP P P A PP P PP
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPV 1142
Query: 728 PXXXPPXVPXSXXSXXPXLP 787
P P S P +P
Sbjct: 1143 PKPSVAAPPVPAPSGAPPVP 1162
Score = 40.3 bits (90), Expect = 3e-04
Identities = 39/168 (23%), Positives = 47/168 (27%), Gaps = 3/168 (1%)
Frame = +2
Query: 353 PXPXNHXSPXPTXPPPXPLHXTXXXXPXPXXXAXPXXPPXXXXXSVNXPPXPXPXXXXGS 532
P + +P PP L P P A P P V P P S
Sbjct: 999 PVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPP-VPIPTSTPPVPKSSS 1057
Query: 533 SPXXXPPPKTPAXXPIXFXXSXSKHXTHXXQTPTPP-PXXXXXXXPXXXPQTARPPXXHP 709
PPP I + S + PP P P P A PP P
Sbjct: 1058 GAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAP 1117
Query: 710 XIXP--PPPXXXPPXVPXSXXSXXPXLPXIRSXXXPIQNSXPXXPXES 847
P P P P VP + P + + P + P P S
Sbjct: 1118 SGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPS 1165
Score = 39.9 bits (89), Expect = 5e-04
Identities = 36/153 (23%), Positives = 41/153 (26%), Gaps = 7/153 (4%)
Frame = +2
Query: 377 PXPTXPPPXPLHXTXXXXPXPXXXAXPXXPPXXXXXSV----NXPPXPXPXXXXGSSPXX 544
P P+ PP P P P A P P V PP P P P
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVP 1136
Query: 545 X---PPPKTPAXXPIXFXXSXSKHXTHXXQTPTPPPXXXXXXXPXXXPQTARPPXXHPXI 715
P PK P S + P P P P PP P
Sbjct: 1137 SGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSE 1196
Query: 716 XPPPPXXXPPXVPXSXXSXXPXLPXIRSXXXPI 814
PP P P S P +P + P+
Sbjct: 1197 APPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPV 1229
Score = 39.5 bits (88), Expect = 6e-04
Identities = 37/128 (28%), Positives = 41/128 (32%), Gaps = 6/128 (4%)
Frame = +2
Query: 500 PXPXPXXXXGSSPXXXPPPKTPAXXPIXFXXSXSKHXTHXXQTPTPPPXXXXXXXPXXXP 679
P P P SSP PP P P+ S S + P P P P P
Sbjct: 970 PPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSP-AAPLARVP-PVPKLSSKAPPVPLP 1027
Query: 680 QTARPPXXHPXIXPPPP-XXXPPXVPXS---XXSXXPXLPXIRS--XXXPIQNSXPXXPX 841
PP P PP P P VP S S P +P S P + P P
Sbjct: 1028 SADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPA 1087
Query: 842 ESXXPAXP 865
S P P
Sbjct: 1088 PSGIPPVP 1095
Score = 29.9 bits (64), Expect = 0.49
Identities = 17/67 (25%), Positives = 22/67 (32%), Gaps = 2/67 (2%)
Frame = +1
Query: 679 PNGXAPXPTPXXXPPSPRXX--XPXXPXXXXIPPPTASXNPLPVXSNPKFXPXXTX*IQX 852
P+G P P P PP P+ P P PP + + P P
Sbjct: 1079 PSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSG 1138
Query: 853 SRPXPTP 873
+ P P P
Sbjct: 1139 APPVPKP 1145
Score = 29.1 bits (62), Expect = 0.86
Identities = 27/101 (26%), Positives = 30/101 (29%)
Frame = +2
Query: 332 KPXGGXXPXPXNHXSPXPTXPPPXPLHXTXXXXPXPXXXAXPXXPPXXXXXSVNXPPXPX 511
KP G P P P T PP P P A P P SV+ P
Sbjct: 1202 KPSVGVPPVP-----PPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSV 1256
Query: 512 PXXXXGSSPXXXPPPKTPAXXPIXFXXSXSKHXTHXXQTPT 634
P +SP A P S SK +T T
Sbjct: 1257 PSPHSNASPSPTSSSMASA-APARTSVSRSKSKAERHETST 1296
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 34.7 bits (76), Expect = 0.017
Identities = 34/139 (24%), Positives = 35/139 (25%), Gaps = 4/139 (2%)
Frame = +2
Query: 341 GGXXPXPXNHXSPXPTXPPPXPLHXTXXXXPXPXXXAXP----XXPPXXXXXSVNXPPXP 508
G P P H P PPP H P P P PP + PP P
Sbjct: 204 GEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 263
Query: 509 XPXXXXGSSPXXXPPPKTPAXXPIXFXXSXSKHXTHXXQTPTPPPXXXXXXXPXXXPQTA 688
P PP P H P PPP P
Sbjct: 264 -----MHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMP-PPPMHHEPGEHMPPPPMH 317
Query: 689 RPPXXHPXIXPPPPXXXPP 745
P H PPPP P
Sbjct: 318 HEPGEH---MPPPPMHHEP 333
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 33.5 bits (73), Expect = 0.040
Identities = 29/128 (22%), Positives = 30/128 (23%), Gaps = 5/128 (3%)
Frame = +2
Query: 497 PPXPXPXXXXGSSPXXXPPPKTPAXXPIXFXXSXSKHXTHXXQTPTPPPXXXXXXXPXXX 676
P P P P P P P SK P P P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSA 187
Query: 677 PQTARPPXXHPXIXPPPPXXXPPXV-----PXSXXSXXPXLPXIRSXXXPIQNSXPXXPX 841
P P PPPP P P S P + S N P P
Sbjct: 188 PSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPPAGHAPNVTSESPKFPNRGPSIPS 247
Query: 842 ESXXPAXP 865
S P P
Sbjct: 248 ASVPPVPP 255
Score = 30.3 bits (65), Expect = 0.37
Identities = 18/65 (27%), Positives = 24/65 (36%)
Frame = +2
Query: 677 PQTARPPXXHPXIXPPPPXXXPPXVPXSXXSXXPXLPXIRSXXXPIQNSXPXXPXESXXP 856
P T+ PP P I PP P PP +P LP P+++ S P
Sbjct: 139 PPTSAPP--RPSIPPPSPASAPP-IPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVP 195
Query: 857 AXPXR 871
P +
Sbjct: 196 PMPPK 200
Score = 28.3 bits (60), Expect = 1.5
Identities = 21/83 (25%), Positives = 24/83 (28%), Gaps = 2/83 (2%)
Frame = +2
Query: 326 PXKPXGGXXPXPXNHXSPXPTXPPPXPLHXTXXXXPXPXXXAXPXXPPXXXXXSVNXPP- 502
P P P P P+ PPP P P + PP V PP
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPS-SLPPPAQPAAPVKSPPS 186
Query: 503 -XPXPXXXXGSSPXXXPPPKTPA 568
P P PPP + A
Sbjct: 187 APSLPSAVPPMPPKVPPPPLSQA 209
Score = 26.6 bits (56), Expect = 4.6
Identities = 14/51 (27%), Positives = 19/51 (37%)
Frame = +2
Query: 677 PQTARPPXXHPXIXPPPPXXXPPXVPXSXXSXXPXLPXIRSXXXPIQNSXP 829
P PP + PP P +P + P +P S PI +S P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIP---SKAPPIPSSLP 172
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 32.3 bits (70), Expect = 0.093
Identities = 17/55 (30%), Positives = 21/55 (38%)
Frame = +2
Query: 623 QTPTPPPXXXXXXXPXXXPQTARPPXXHPXIXPPPPXXXPPXVPXSXXSXXPXLP 787
++P PPP P P PP P + PPP PP V + P P
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPA--PIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 31.5 bits (68), Expect = 0.16
Identities = 18/59 (30%), Positives = 18/59 (30%)
Frame = +2
Query: 392 PPPXPLHXTXXXXPXPXXXAXPXXPPXXXXXSVNXPPXPXPXXXXGSSPXXXPPPKTPA 568
PPP P P P P PP PP P G P PPP A
Sbjct: 732 PPPPP---PAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSA 787
Score = 30.3 bits (65), Expect = 0.37
Identities = 23/78 (29%), Positives = 26/78 (33%)
Frame = +2
Query: 326 PXKPXGGXXPXPXNHXSPXPTXPPPXPLHXTXXXXPXPXXXAXPXXPPXXXXXSVNXPPX 505
P P P P +P P PPP P+ P P A PP PP
Sbjct: 733 PPPPPAVIVPTPA--PAPIPV-PPPAPIMGGPPPPPPPPGVAGAGPPP---------PPP 780
Query: 506 PXPXXXXGSSPXXXPPPK 559
P P G S P P+
Sbjct: 781 PPPAVSAGGSRYYAPAPQ 798
Score = 28.3 bits (60), Expect = 1.5
Identities = 15/43 (34%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Frame = +2
Query: 626 TPTPPPXXXXXXXPXXX-PQTARPPXXHPXIXPPPPXXXPPXV 751
TP P P P P PP PPPP PP V
Sbjct: 743 TPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAV 785
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.9 bits (69), Expect = 0.12
Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Frame = +1
Query: 679 PNGXAPXPTPXXXPPSPRXXXPXXPXXXXIP--PPTASXNPLPVXSNP 816
P AP PP P P P +P PP+A PLP S P
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 30.7 bits (66), Expect = 0.28
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +2
Query: 665 PXXXPQTARPPXXHPXIXPPPPXXXPP 745
P PQ+A PP PPPP PP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPP 1716
Score = 28.3 bits (60), Expect = 1.5
Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = +2
Query: 629 PTPPPXXXXXXXPXXXP-QTARPPXXHPXIXPPPPXXXPPXVP 754
PTPPP P P A PP P PP P P VP
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPP---PPLPASSAPSVP 1744
Score = 28.3 bits (60), Expect = 1.5
Identities = 12/38 (31%), Positives = 15/38 (39%)
Frame = +2
Query: 665 PXXXPQTARPPXXHPXIXPPPPXXXPPXVPXSXXSXXP 778
P P + PP P + PP PP +P S P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 27.5 bits (58), Expect = 2.6
Identities = 13/45 (28%), Positives = 17/45 (37%)
Frame = +2
Query: 677 PQTARPPXXHPXIXPPPPXXXPPXVPXSXXSXXPXLPXIRSXXXP 811
PQ + P P + PPP PP + P LP + P
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 31.9 bits (69), Expect = 0.12
Identities = 35/164 (21%), Positives = 46/164 (28%), Gaps = 1/164 (0%)
Frame = +2
Query: 383 PTXPPPXPLHXTXXXXPXPXXXAXPXXPPXXXXXSVNXPPXPXPXXXXGSSPXXXPPPKT 562
P PPP +H P + +N P S P P
Sbjct: 39 PNLPPPFSVHQLQSFVPPQPPSSSSPSTTGTVAVPINGANAVYPSTNSVSLPQSYDP-WL 97
Query: 563 PAXXPIXFXXSXSKHXTHXXQTPTPPPXXXXXXXPXXXPQTARPPXXHPXIXPPPPXXXP 742
A + + H ++ Q+PT P P + PP +P P P
Sbjct: 98 DANGVVPLPHDVASHPSYMVQSPTSYHACSNNQSPF--PHSHHPPLHNPLPVSCQPVLRP 155
Query: 743 PXVPXSXXSXXP-XLPXIRSXXXPIQNSXPXXPXESXXPAXPXR 871
P VP P LP PI + P P P R
Sbjct: 156 PPVPQVPSHWYPVSLPSPNLPHQPI-SKPPVIPNLPKLQVHPNR 198
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.3 bits (60), Expect = 1.5
Identities = 21/76 (27%), Positives = 24/76 (31%), Gaps = 3/76 (3%)
Frame = +2
Query: 359 PXNHXSPXPTXPPPXPLHXTXXXXPXPXXXAXPXXPPXXXXXSVNXPPXPXPXXXX---G 529
P ++ S P P T P P PP S N P P G
Sbjct: 209 PDDYYSSGRAVSPEIPPTYTPKQAD-PLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLG 267
Query: 530 SSPXXXPPPKTPAXXP 577
S PPP TP+ P
Sbjct: 268 SQVNIPPPPATPSQPP 283
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,863,421
Number of Sequences: 5004
Number of extensions: 24786
Number of successful extensions: 193
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 131
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 436477420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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