Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_M02
(932 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.67
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.67
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.67
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.2
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.2
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.2
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 28 2.0
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 28 2.0
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 28 8.3
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 28 8.3
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 28 8.3
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.9 bits (69), Expect = 0.67
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -3
Query: 309 PXXXXTPPPPPKXGXPXXXGGGXXPPXKKKRG 214
P +PPPPP G P G PP RG
Sbjct: 274 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRG 305
Score = 31.5 bits (68), Expect = 0.89
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -3
Query: 309 PXXXXTPPPPPKXGXPXXXGGGXXPP 232
P PPPPP G P G G PP
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPP 257
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -3
Query: 309 PXXXXTPPPPPKXGXPXXXGGGXXPPXK 226
P +PPPPP P GG PP +
Sbjct: 266 PPRTGSPPPPPTGSPPPPPAGGSPPPPR 293
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.9 bits (69), Expect = 0.67
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -3
Query: 309 PXXXXTPPPPPKXGXPXXXGGGXXPPXKKKRG 214
P +PPPPP G P G PP RG
Sbjct: 295 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRG 326
Score = 31.5 bits (68), Expect = 0.89
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -3
Query: 309 PXXXXTPPPPPKXGXPXXXGGGXXPP 232
P PPPPP G P G G PP
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPP 278
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -3
Query: 309 PXXXXTPPPPPKXGXPXXXGGGXXPPXK 226
P +PPPPP P GG PP +
Sbjct: 287 PPRTGSPPPPPTGSPPPPPAGGSPPPPR 314
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.9 bits (69), Expect = 0.67
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -3
Query: 309 PXXXXTPPPPPKXGXPXXXGGGXXPPXKKKRG 214
P +PPPPP G P G PP RG
Sbjct: 280 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRG 311
Score = 31.5 bits (68), Expect = 0.89
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -3
Query: 309 PXXXXTPPPPPKXGXPXXXGGGXXPP 232
P PPPPP G P G G PP
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPP 263
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -3
Query: 309 PXXXXTPPPPPKXGXPXXXGGGXXPPXK 226
P +PPPPP P GG PP +
Sbjct: 272 PPRTGSPPPPPTGSPPPPPAGGSPPPPR 299
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -3
Query: 309 PXXXXTPPPPPKXGXPXXXGGGXXPPXKKKRGGXXP 202
P PPPPP G P GG PP GG P
Sbjct: 737 PITGGPPPPPPPGGLPPISGG--PPPPPPPPGGCPP 770
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -3
Query: 309 PXXXXTPPPPPKXGXPXXXGGGXXPP 232
P PPPPP G P GG PP
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPP 746
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -3
Query: 309 PXXXXTPPPPPKXGXPXXXGGGXXPPXKKKRGGXXP 202
P PPPPP G P GG PP GG P
Sbjct: 737 PITGGPPPPPPPGGLPPISGG--PPPPPPPPGGCPP 770
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -3
Query: 309 PXXXXTPPPPPKXGXPXXXGGGXXPP 232
P PPPPP G P GG PP
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPP 746
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -3
Query: 309 PXXXXTPPPPPKXGXPXXXGGGXXPPXKKKRGGXXP 202
P PPPPP G P GG PP GG P
Sbjct: 320 PITGGPPPPPPPGGLPPISGG--PPPPPPPPGGCPP 353
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -3
Query: 309 PXXXXTPPPPPKXGXPXXXGGGXXPP 232
P PPPPP G P GG PP
Sbjct: 304 PITGGPPPPPPPGGLPPITGGPPPPP 329
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 27.9 bits (59), Expect(2) = 2.0
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = -3
Query: 291 PPPPPKXGXPXXXGGGXXPPXKKKR--GGXXP 202
PPPPP P GG PP R GG P
Sbjct: 328 PPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPP 359
Score = 21.0 bits (42), Expect(2) = 2.0
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = -3
Query: 309 PXXXXTPPPPPKXG 268
P PPPPP G
Sbjct: 291 PGMTPRPPPPPSSG 304
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 27.9 bits (59), Expect(2) = 2.0
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = -3
Query: 291 PPPPPKXGXPXXXGGGXXPPXKKKR--GGXXP 202
PPPPP P GG PP R GG P
Sbjct: 318 PPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPP 349
Score = 21.0 bits (42), Expect(2) = 2.0
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = -3
Query: 309 PXXXXTPPPPPKXG 268
P PPPPP G
Sbjct: 281 PGMTPRPPPPPSSG 294
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.3 bits (60), Expect = 8.3
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -3
Query: 291 PPPPPKXGXPXXXGGGXXPP 232
PPPPP G P G PP
Sbjct: 633 PPPPPPMGLPAVGAGAPPPP 652
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.3 bits (60), Expect = 8.3
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -3
Query: 291 PPPPPKXGXPXXXGGGXXPP 232
PPPPP G P G PP
Sbjct: 459 PPPPPPMGLPAVGAGAPPPP 478
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -3
Query: 288 PPPPKXGXPXXXGGGXXPPXKKKRGGXXP 202
PPPP GG PP +RGG P
Sbjct: 782 PPPPSFRGGRGGHGGPPPPHFDRRGGGGP 810
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,961,450
Number of Sequences: 27780
Number of extensions: 133571
Number of successful extensions: 484
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 431
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2402214122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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