Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_L17
         (1083 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0299 - 17051570-17052474,17053542-17053755                       27   4.5  
02_05_0789 + 31766300-31767056,31767316-31767659                       29   4.8  
02_05_0686 - 30900748-30902167,30903442-30904742                       24   5.4  
05_04_0011 + 17139322-17139451,17139552-17140174                       27   6.0  
03_01_0515 - 3864796-3865425                                           24   6.1  
02_04_0567 - 23914330-23914461,23915016-23915136,23915954-239160...    29   8.5  
01_01_0046 - 331758-332627                                             29   8.5  

>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 26.6 bits (56), Expect(2) = 4.5
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -1

Query: 822 PPPPPPPP 799
           PPPPPPPP
Sbjct: 325 PPPPPPPP 332



 Score = 21.4 bits (43), Expect(2) = 4.5
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = -1

Query: 840 FXXXXXPPPPPP 805
           F     PPPPPP
Sbjct: 284 FSPPSPPPPPPP 295


>02_05_0789 + 31766300-31767056,31767316-31767659
          Length = 366

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = -1

Query: 846 FFFXXXXXPPPPPPPP 799
           F F     PPPPPPPP
Sbjct: 62  FMFLSVLSPPPPPPPP 77


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 23.8 bits (49), Expect(2) = 5.4
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -1

Query: 822 PPPPPPP 802
           PPPPPPP
Sbjct: 353 PPPPPPP 359



 Score = 23.8 bits (49), Expect(2) = 5.4
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -1

Query: 819 PPPPPPP 799
           PPPPPPP
Sbjct: 364 PPPPPPP 370


>05_04_0011 + 17139322-17139451,17139552-17140174
          Length = 250

 Score = 26.6 bits (56), Expect(2) = 6.0
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -1

Query: 822 PPPPPPPP 799
           PPPPPPPP
Sbjct: 103 PPPPPPPP 110



 Score = 21.0 bits (42), Expect(2) = 6.0
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = -1

Query: 840 FXXXXXPPPPPPP 802
           F     PPPP PP
Sbjct: 65  FQPPPPPPPPSPP 77


>03_01_0515 - 3864796-3865425
          Length = 209

 Score = 23.8 bits (49), Expect(2) = 6.1
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -1

Query: 822 PPPPPPP 802
           PPPPPPP
Sbjct: 71  PPPPPPP 77



 Score = 23.8 bits (49), Expect(2) = 6.1
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -1

Query: 819 PPPPPPP 799
           PPPPPPP
Sbjct: 89  PPPPPPP 95


>02_04_0567 -
           23914330-23914461,23915016-23915136,23915954-23916048,
           23916131-23916301,23917291-23917380,23917636-23918139
          Length = 370

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = -1

Query: 846 FFFXXXXXPPPPPPPP 799
           F F     PPPPPPPP
Sbjct: 33  FTFLCPPPPPPPPPPP 48


>01_01_0046 - 331758-332627
          Length = 289

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 846 FFFXXXXXPPPPPPPP 799
           ++F     PPPPPPPP
Sbjct: 13  YWFPYWTSPPPPPPPP 28


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,269,320
Number of Sequences: 37544
Number of extensions: 420419
Number of successful extensions: 31117
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11028
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3234583292
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)