Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_L14
         (657 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0196 + 1520015-1520191,1520483-1520527,1521851-1521910,152...    29   3.3  
10_08_0898 + 21424379-21424792,21424974-21425723                       28   5.7  
01_01_0060 + 477667-477816,479312-479722                               28   5.7  
01_06_1050 + 34125087-34126001,34126082-34126639                       27   9.9  

>06_01_0196 +
           1520015-1520191,1520483-1520527,1521851-1521910,
           1522246-1522358,1522432-1522642,1523087-1523133,
           1523211-1523369,1523521-1523624,1524300-1524634
          Length = 416

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +2

Query: 242 SDGFDEDGDRCLWCLKAP 295
           SDGFDE  D C  CL+ P
Sbjct: 282 SDGFDEGADACAVCLERP 299


>10_08_0898 + 21424379-21424792,21424974-21425723
          Length = 387

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = -1

Query: 282 HHKHRSPSSSNPSLATKGSTSELTHRHSPLSFSPD 178
           HH H       PS AT  +TS   H+ S LSF+ D
Sbjct: 101 HHHHHIGGMGEPSGATPSATSS-DHQTSMLSFADD 134


>01_01_0060 + 477667-477816,479312-479722
          Length = 186

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -1

Query: 285 RHHKHRS-PSSSNPSLATKGSTSELTHRHSPLSFSPDL 175
           RHH H S  SSS+P  +TK + ++L H     ++   L
Sbjct: 32  RHHHHYSTSSSSSPPSSTKEAVTQLDHLEQAAAYIKQL 69


>01_06_1050 + 34125087-34126001,34126082-34126639
          Length = 490

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +2

Query: 209 WVSSLVEPFVASDGFDEDGDRCLWCLKA 292
           +V S++E F+    F+ DGD+ LW  KA
Sbjct: 113 YVVSVMEDFLGHGIFNSDGDQWLWQRKA 140


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,325,338
Number of Sequences: 37544
Number of extensions: 165335
Number of successful extensions: 365
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 363
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)