Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_L09
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28928-12|AAL16320.2| 597|Caenorhabditis elegans Hypothetical p... 99 2e-21
Z36948-5|CAD30435.1| 453|Caenorhabditis elegans Hypothetical pr... 44 9e-05
Z36948-4|CAA85411.3| 615|Caenorhabditis elegans Hypothetical pr... 44 9e-05
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 30 1.5
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 30 1.5
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 30 1.5
Z32679-5|CAA83594.2| 408|Caenorhabditis elegans Hypothetical pr... 30 2.0
AJ131181-1|CAA10315.1| 962|Caenorhabditis elegans DAF-18 protei... 29 3.5
AF126286-1|AAD21620.1| 962|Caenorhabditis elegans PTEN phosphat... 29 3.5
AF098286-1|AAD03420.1| 962|Caenorhabditis elegans DAF-18 protein. 29 3.5
AF036706-19|AAK39284.1| 962|Caenorhabditis elegans Abnormal dau... 29 3.5
U10438-8|AAU87835.1| 627|Caenorhabditis elegans Hypothetical pr... 29 4.7
U88173-1|AAK21381.1| 264|Caenorhabditis elegans Temporarily ass... 28 6.2
Z83316-4|CAB54187.3| 1050|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z83316-3|CAB05895.3| 1054|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z81568-3|CAB04592.1| 643|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical pr... 28 8.1
AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical ... 28 8.1
>U28928-12|AAL16320.2| 597|Caenorhabditis elegans Hypothetical
protein C44B7.2a protein.
Length = 597
Score = 99 bits (238), Expect = 2e-21
Identities = 53/153 (34%), Positives = 83/153 (54%), Gaps = 2/153 (1%)
Frame = -2
Query: 683 YTLTLAF--SKQAYLSEVMNPYPLPDKSPSFKDYVGNKNNRFLTPASIHKNRIQPPSKVL 510
+ LTL F S Q + + +P+ LPD SPSFKDY ++N RF TP KNRI P+ L
Sbjct: 371 FGLTLEFKPSHQECVHHLRDPFLLPDGSPSFKDYSSSRNQRFSTPELAAKNRIIFPTNTL 430
Query: 509 HFFNTPPDVSDEQLLQVFKDYGVTPPHTISKFPLKSERSSSGLMEFQNISQSVMAIMACN 330
H+FN P + ++ LL + + P I FP ++ERS++G EF+ + + + N
Sbjct: 431 HWFNAPGTMDEQALLDLMAEKTEHKPVKIDIFPSRNERSAAGTAEFETVEIANEVLALVN 490
Query: 329 HATIQHXGAKFPFVMKLCFSSSRQIGQGKGLKP 231
H + PF++K +++ R+ G G +P
Sbjct: 491 HTPVNSPYGSAPFIVKWAYATPRR-WDGSGGEP 522
>Z36948-5|CAD30435.1| 453|Caenorhabditis elegans Hypothetical
protein D2089.4b protein.
Length = 453
Score = 44.4 bits (100), Expect = 9e-05
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Frame = -2
Query: 596 KDYVGNKNNRFLTPASIHKNRIQPPSKVLHFFNTPPDVSDEQLLQVFKDYGVTPPHTISK 417
+DY + +RF P S + I PP LH N P VS+E+L ++F + G +
Sbjct: 350 RDYAHSTLHRFKKPGSKNYLNIYPPCATLHLSNIPTSVSEEKLKEMFAEAG----FAVKA 405
Query: 416 FPLKSERSSSGLMEFQNISQSVMAIMAC-NHATIQHXGAKFPF 291
F + L + ++I ++ A++A NH ++ + F
Sbjct: 406 FKFFPKDHKMALCQLEDIETAIDALIAMHNHKLAENAHLRVSF 448
>Z36948-4|CAA85411.3| 615|Caenorhabditis elegans Hypothetical
protein D2089.4a protein.
Length = 615
Score = 44.4 bits (100), Expect = 9e-05
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Frame = -2
Query: 596 KDYVGNKNNRFLTPASIHKNRIQPPSKVLHFFNTPPDVSDEQLLQVFKDYGVTPPHTISK 417
+DY + +RF P S + I PP LH N P VS+E+L ++F + G +
Sbjct: 512 RDYAHSTLHRFKKPGSKNYLNIYPPCATLHLSNIPTSVSEEKLKEMFAEAG----FAVKA 567
Query: 416 FPLKSERSSSGLMEFQNISQSVMAIMAC-NHATIQHXGAKFPF 291
F + L + ++I ++ A++A NH ++ + F
Sbjct: 568 FKFFPKDHKMALCQLEDIETAIDALIAMHNHKLAENAHLRVSF 610
Score = 33.5 bits (73), Expect = 0.16
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -2
Query: 527 PPSKVLHFFNTPPDVSDEQLLQVFKDYG 444
P SKV+H N PPD+ D +L+Q+ YG
Sbjct: 118 PVSKVVHVRNIPPDLVDVELMQLCIQYG 145
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = -2
Query: 491 PDVSDEQLLQVFKDYGVTPPHTISKFPLKSERSSSGLMEFQNISQSVMAIMACN 330
PD+S+ L VF+ +G +++ P G +EF N++ AI N
Sbjct: 216 PDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMN 269
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = -2
Query: 491 PDVSDEQLLQVFKDYGVTPPHTISKFPLKSERSSSGLMEFQNISQSVMAIMACN 330
PD+S+ L VF+ +G +++ P G +EF N++ AI N
Sbjct: 216 PDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMN 269
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = -2
Query: 491 PDVSDEQLLQVFKDYGVTPPHTISKFPLKSERSSSGLMEFQNISQSVMAIMACN 330
PD+S+ L VF+ +G +++ P G +EF N++ AI N
Sbjct: 216 PDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMN 269
>Z32679-5|CAA83594.2| 408|Caenorhabditis elegans Hypothetical
protein C05B5.6 protein.
Length = 408
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = -2
Query: 692 VGDYTLTLAFSKQAYLSEVMNPYPLPDKSPSFKDYVGNKNNRFLTPASIHKNR 534
+ D TLTL + + S+V LPD P+ + NRF T H+++
Sbjct: 75 LADETLTLDSADRFNASQVKQCIDLPDNHPAMASKTVLQTNRFSTVGDAHRSQ 127
>AJ131181-1|CAA10315.1| 962|Caenorhabditis elegans DAF-18 protein
protein.
Length = 962
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/56 (25%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = -2
Query: 539 NRIQPPSKVLHFFNTPPDVSDEQLLQVFKDYGVTPP-HTISKFPLKSERSSSGLME 375
N + P ++++ +++EQ ++ + +YG+ PP +TISK + E+ G+++
Sbjct: 407 NEFESPWQIVNPPGLEKHITEEQAMENYTNYGMIPPRYTISK--ILHEKHEKGIVK 460
>AF126286-1|AAD21620.1| 962|Caenorhabditis elegans PTEN
phosphatidylinositol 3' phosphatasehomolog DAF-18
protein.
Length = 962
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/56 (25%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = -2
Query: 539 NRIQPPSKVLHFFNTPPDVSDEQLLQVFKDYGVTPP-HTISKFPLKSERSSSGLME 375
N + P ++++ +++EQ ++ + +YG+ PP +TISK + E+ G+++
Sbjct: 407 NEFESPWQIVNPPGLEKHITEEQAMENYTNYGMIPPRYTISK--ILHEKHEKGIVK 460
>AF098286-1|AAD03420.1| 962|Caenorhabditis elegans DAF-18 protein.
Length = 962
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/56 (25%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = -2
Query: 539 NRIQPPSKVLHFFNTPPDVSDEQLLQVFKDYGVTPP-HTISKFPLKSERSSSGLME 375
N + P ++++ +++EQ ++ + +YG+ PP +TISK + E+ G+++
Sbjct: 407 NEFESPWQIVNPPGLEKHITEEQAMENYTNYGMIPPRYTISK--ILHEKHEKGIVK 460
>AF036706-19|AAK39284.1| 962|Caenorhabditis elegans Abnormal dauer
formation protein 18 protein.
Length = 962
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/56 (25%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = -2
Query: 539 NRIQPPSKVLHFFNTPPDVSDEQLLQVFKDYGVTPP-HTISKFPLKSERSSSGLME 375
N + P ++++ +++EQ ++ + +YG+ PP +TISK + E+ G+++
Sbjct: 407 NEFESPWQIVNPPGLEKHITEEQAMENYTNYGMIPPRYTISK--ILHEKHEKGIVK 460
>U10438-8|AAU87835.1| 627|Caenorhabditis elegans Hypothetical
protein B0280.2 protein.
Length = 627
Score = 28.7 bits (61), Expect = 4.7
Identities = 20/87 (22%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Frame = -2
Query: 677 LTLAFSKQAYLSEVMNPYPLPDKSPSFKDYVGNKNNRFLTPASIHKNRI-QPPSKVLHFF 501
L +F + S +NP+P P + SF +K F+ P + + Q P ++ F
Sbjct: 421 LAASFPTSSTPSRFLNPFPAPLPAESFFGNSKSKIAYFIKPTNEQPQELFQTPVQIEKIF 480
Query: 500 NTPPD--VSDEQLLQVFKDYGVTPPHT 426
++ P VS+ ++ K+ ++ T
Sbjct: 481 SSTPSSPVSNAAIIDGMKNISLSDSST 507
>U88173-1|AAK21381.1| 264|Caenorhabditis elegans Temporarily
assigned gene nameprotein 83 protein.
Length = 264
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/80 (23%), Positives = 35/80 (43%)
Frame = -2
Query: 740 RCXSVERCVQXXNNVTVGDYTLTLAFSKQAYLSEVMNPYPLPDKSPSFKDYVGNKNNRFL 561
RC V N ++ D ++ FS Q + + P D PS+K Y+G ++
Sbjct: 137 RCAIVVNAFMRFNAISATDDSVDDRFSMQRFSERFLGP----DGPPSYKRYLGYFSSLLS 192
Query: 560 TPASIHKNRIQPPSKVLHFF 501
S++ + + + +L FF
Sbjct: 193 GRISVNSDPLYLHNIILTFF 212
>Z83316-4|CAB54187.3| 1050|Caenorhabditis elegans Hypothetical
protein B0379.3b protein.
Length = 1050
Score = 27.9 bits (59), Expect = 8.1
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = -2
Query: 692 VGDYTLTLAFSKQAYLSEVMNPYPLPDKSPSFKDYVGNKNNRFLTPASIH-KNRIQPPSK 516
VGD T + + S+ +P K KD + K R L H K++ QPPSK
Sbjct: 513 VGDTTSDSEITSEGSYSDE-DPEQKEIKRQRRKDKLKKKQERELRSREKHTKSKQQPPSK 571
Query: 515 VLHFFNT 495
+ FNT
Sbjct: 572 IETRFNT 578
>Z83316-3|CAB05895.3| 1054|Caenorhabditis elegans Hypothetical
protein B0379.3a protein.
Length = 1054
Score = 27.9 bits (59), Expect = 8.1
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = -2
Query: 692 VGDYTLTLAFSKQAYLSEVMNPYPLPDKSPSFKDYVGNKNNRFLTPASIH-KNRIQPPSK 516
VGD T + + S+ +P K KD + K R L H K++ QPPSK
Sbjct: 517 VGDTTSDSEITSEGSYSDE-DPEQKEIKRQRRKDKLKKKQERELRSREKHTKSKQQPPSK 575
Query: 515 VLHFFNT 495
+ FNT
Sbjct: 576 IETRFNT 582
>Z81568-3|CAB04592.1| 643|Caenorhabditis elegans Hypothetical
protein K08E3.4 protein.
Length = 643
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 208 SGKPRTTAWSSTNTIKRRSGAEHKLTHIKTE 116
S + R WS+TN ++R A+ K+ H K +
Sbjct: 168 SSEARENFWSTTNQEEKRRQADEKVAHAKQQ 198
>Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical protein
W05B2.2 protein.
Length = 1278
Score = 27.9 bits (59), Expect = 8.1
Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Frame = -2
Query: 545 HKNRIQPPSKVLHFFNTPP--DVSDEQLLQVFKDYGVTPPHTISKFPLKSERSSSGLMEF 372
HKN P +V P + SD+ LL+ + D + +T F + ++ G
Sbjct: 1014 HKNYCCPQKEVACAQPIPELEEESDDSLLRYYYD---SETNTCHSFNFYRKGNAHGATAQ 1070
Query: 371 QNISQSVMAIMACNHATIQHXGAKFPFVMKL 279
+ + I C H++I+H P++ L
Sbjct: 1071 NHFADHTACIEMCVHSSIEHLQCPHPYLNPL 1101
>AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical
protein H05C05.1a protein.
Length = 820
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -2
Query: 155 KRRRTQTHTYQDGRQHTHTDHY-EFTGGGGRGDLPVHRITD 36
+ ++T GRQ+++ +HY + GGGG G + T+
Sbjct: 240 QHNHNHSNTKDYGRQYSNHNHYSNYHGGGGPGSISARSRTE 280
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,723,783
Number of Sequences: 27780
Number of extensions: 349596
Number of successful extensions: 901
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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