Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_L08
(803 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 33 0.27
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 31 0.81
10_08_1037 - 22477358-22478752 24 3.0
10_08_0608 + 19184722-19185224,19185331-19185410,19186048-191862... 29 4.3
08_02_1012 + 23550314-23551504 29 4.3
10_01_0274 - 2901033-2901778,2902475-2902634 29 5.7
02_01_0275 - 1828300-1828344,1828396-1828531,1828623-1829317 29 5.7
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 28 7.6
03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009... 28 7.6
03_01_0515 - 3864796-3865425 28 7.6
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 28 10.0
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = +2
Query: 497 PXPPPPRPXXGWXXXXXPPXXSPXXGSXXLXPPXXPXRGRP 619
P PPPP+P PP +P PP P +G P
Sbjct: 314 PPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPP 354
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 31.5 bits (68), Expect = 0.81
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = +2
Query: 497 PXPPPPRPXXGWXXXXXPPXXSPXXGSXXLXPPXXP 604
P PPPP P PP +P G+ PP P
Sbjct: 634 PPPPPPPPPPSLPNRLVPPPPAPGIGNKFPAPPPPP 669
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +2
Query: 497 PXPPPPRPXXGWXXXXXPPXXSPXXGSXXLXPPXXPXRG 613
P PPPP P PP P + + PP P G
Sbjct: 621 PPPPPPLPNHSVLPPPPPPPPPPSLPNRLVPPPPAPGIG 659
>10_08_1037 - 22477358-22478752
Length = 464
Score = 24.2 bits (50), Expect(2) = 3.0
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 494 HPXPPPPRPXXG 529
HP PPPP P G
Sbjct: 366 HPPPPPPVPSPG 377
Score = 23.8 bits (49), Expect(2) = 3.0
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2
Query: 491 YHPXPPPPRP 520
+HP PPPP P
Sbjct: 363 HHPHPPPPPP 372
>10_08_0608 +
19184722-19185224,19185331-19185410,19186048-19186235,
19187021-19187927,19188015-19188142,19189270-19189356,
19189422-19189472,19189582-19189668,19189746-19189873,
19190469-19190608,19190721-19190882,19190964-19192733,
19192807-19192922,19193077-19193227,19193243-19193371,
19193598-19194139
Length = 1722
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +2
Query: 497 PXPPPPRPXXGWXXXXXPPXXSPXXGSXXLXPPXXPXRGRP 619
P PPPP P PP G PP P G P
Sbjct: 26 PPPPPPHPPPPPPLEPAPPSTPQLRGEASPPPPPPPPVGPP 66
>08_02_1012 + 23550314-23551504
Length = 396
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/40 (35%), Positives = 16/40 (40%)
Frame = +2
Query: 506 PPPRPXXGWXXXXXPPXXSPXXGSXXLXPPXXPXRGRPXR 625
P P+P P +P S PP P RGRP R
Sbjct: 163 PQPQPRSPRPASPPPVPAAPEVASAVSTPPARPKRGRPPR 202
>10_01_0274 - 2901033-2901778,2902475-2902634
Length = 301
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/42 (35%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Frame = +2
Query: 497 PXPPPPRPXXGWXXXXXPPXXSPXXGS-XXLXPPXXPXRGRP 619
P PP P G PP +P GS PP P G P
Sbjct: 248 PECPPSTPEYGTPATACPPPTAPGYGSPSPFWPPVSPAYGTP 289
>02_01_0275 - 1828300-1828344,1828396-1828531,1828623-1829317
Length = 291
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2
Query: 506 PPPRPXXGWXXXXXPPXXSPXXGSXXLXPPXXP 604
PPP+P W PP +P + L PP P
Sbjct: 123 PPPQPPRAWDPSPPPPPPAP--AAPVLVPPPAP 153
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +2
Query: 497 PXPPPPRPXXGWXXXXXPPXXSPXXGSXXLXPP 595
P PPPP P PP P L PP
Sbjct: 109 PPPPPPSPPPSAPPPPPPPPTQPPPREAQLAPP 141
Score = 27.9 bits (59), Expect = 10.0
Identities = 14/49 (28%), Positives = 16/49 (32%)
Frame = +2
Query: 473 PXXXXXYHPXPPPPRPXXGWXXXXXPPXXSPXXGSXXLXPPXXPXRGRP 619
P Y+ PPPP P PP P PP P +P
Sbjct: 83 PPPPQMYYQPPPPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPPPPPTQP 131
Score = 27.9 bits (59), Expect = 10.0
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +2
Query: 473 PXXXXXYHPXPPPPRPXXGWXXXXXPPXXSPXXGSXXLXPPXXPXRGRPXR 625
P Y P PPPP PP P PP P P R
Sbjct: 84 PPPQMYYQPPPPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPPPPPTQPPPR 134
>03_06_0365 -
33399422-33399925,33400470-33400583,33400762-33400929,
33401305-33401547,33402148-33402231,33402323-33403098,
33404423-33404636
Length = 700
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = -3
Query: 600 LXGGXXXXEPXXGDXQGGXXXXXHPXXGRGGGGXG 496
+ GG P GD G GRGGGG G
Sbjct: 141 IVGGSRWAGPASGDGTGAVGGPRQSVGGRGGGGGG 175
>03_01_0515 - 3864796-3865425
Length = 209
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/59 (27%), Positives = 18/59 (30%)
Frame = +2
Query: 428 PPXSLXPXL*XPGXHPXXXXXYHPXPPPPRPXXGWXXXXXPPXXSPXXGSXXLXPPXXP 604
PP + P + P P P P PP P PP P PP P
Sbjct: 62 PPPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPPPSPVKSSPPPPP 120
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 27.9 bits (59), Expect = 10.0
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = -3
Query: 603 GLXGGXXXXEPXXGDXQGGXXXXXHPXXGRGGGGXG*YXXXXXGWXPGXXSXGXSDXGG 427
G GG G G + GRGGGG G Y G G G GG
Sbjct: 61 GYGGGGVGGGYGGGGGGYGGGGGGYGGGGRGGGGGGGYGGGGGGGRGGGGGGGGRGGGG 119
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,896,506
Number of Sequences: 37544
Number of extensions: 156553
Number of successful extensions: 1169
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1108
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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