Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_L07
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 244 4e-65
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 244 4e-65
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 244 4e-65
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 244 4e-65
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 244 4e-65
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 244 4e-65
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 241 4e-64
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 241 4e-64
AL021571-3|CAC70102.2| 344|Caenorhabditis elegans Hypothetical ... 30 1.4
U00055-5|AAL06044.4| 1182|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z93383-7|CAB07621.1| 285|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z83217-4|CAB05683.2| 1178|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z50874-11|CAA90766.1| 259|Caenorhabditis elegans Hypothetical p... 27 9.8
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 244 bits (598), Expect = 4e-65
Identities = 118/179 (65%), Positives = 139/179 (77%)
Frame = -1
Query: 664 QDEMIDCIGVTQGQRIQRCHXSLAHKEATPRKTHKGLRKVACIGAWHPSRVSFTVARAGQ 485
QDEMID IGVT+G + S H + PRKTHKGLRKVACIGAWHPSRV+FTVARAGQ
Sbjct: 213 QDEMIDTIGVTRGHGFKGV-TSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQ 271
Query: 484 KGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFV 305
KG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++
Sbjct: 272 KGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYI 328
Query: 304 MIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPAXQGCIHG 128
M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A + G
Sbjct: 329 MLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMG 387
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 244 bits (598), Expect = 4e-65
Identities = 118/179 (65%), Positives = 139/179 (77%)
Frame = -1
Query: 664 QDEMIDCIGVTQGQRIQRCHXSLAHKEATPRKTHKGLRKVACIGAWHPSRVSFTVARAGQ 485
QDEMID IGVT+G + S H + PRKTHKGLRKVACIGAWHPSRV+FTVARAGQ
Sbjct: 213 QDEMIDTIGVTRGHGFKGV-TSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQ 271
Query: 484 KGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFV 305
KG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++
Sbjct: 272 KGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYI 328
Query: 304 MIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPAXQGCIHG 128
M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A + G
Sbjct: 329 MLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMG 387
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 244 bits (598), Expect = 4e-65
Identities = 118/179 (65%), Positives = 139/179 (77%)
Frame = -1
Query: 664 QDEMIDCIGVTQGQRIQRCHXSLAHKEATPRKTHKGLRKVACIGAWHPSRVSFTVARAGQ 485
QDEMID IGVT+G + S H + PRKTHKGLRKVACIGAWHPSRV+FTVARAGQ
Sbjct: 115 QDEMIDTIGVTRGHGFKGV-TSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQ 173
Query: 484 KGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFV 305
KG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++
Sbjct: 174 KGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYI 230
Query: 304 MIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPAXQGCIHG 128
M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A + G
Sbjct: 231 MLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMG 289
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 244 bits (598), Expect = 4e-65
Identities = 118/179 (65%), Positives = 139/179 (77%)
Frame = -1
Query: 664 QDEMIDCIGVTQGQRIQRCHXSLAHKEATPRKTHKGLRKVACIGAWHPSRVSFTVARAGQ 485
QDEMID IGVT+G + S H + PRKTHKGLRKVACIGAWHPSRV+FTVARAGQ
Sbjct: 213 QDEMIDTIGVTRGHGFKGV-TSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQ 271
Query: 484 KGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFV 305
KG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++
Sbjct: 272 KGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYI 328
Query: 304 MIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPAXQGCIHG 128
M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A + G
Sbjct: 329 MLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMG 387
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 244 bits (598), Expect = 4e-65
Identities = 118/179 (65%), Positives = 139/179 (77%)
Frame = -1
Query: 664 QDEMIDCIGVTQGQRIQRCHXSLAHKEATPRKTHKGLRKVACIGAWHPSRVSFTVARAGQ 485
QDEMID IGVT+G + S H + PRKTHKGLRKVACIGAWHPSRV+FTVARAGQ
Sbjct: 115 QDEMIDTIGVTRGHGFKGV-TSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQ 173
Query: 484 KGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFV 305
KG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++
Sbjct: 174 KGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYI 230
Query: 304 MIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPAXQGCIHG 128
M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A + G
Sbjct: 231 MLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMG 289
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 244 bits (598), Expect = 4e-65
Identities = 118/179 (65%), Positives = 139/179 (77%)
Frame = -1
Query: 664 QDEMIDCIGVTQGQRIQRCHXSLAHKEATPRKTHKGLRKVACIGAWHPSRVSFTVARAGQ 485
QDEMID IGVT+G + S H + PRKTHKGLRKVACIGAWHPSRV+FTVARAGQ
Sbjct: 213 QDEMIDTIGVTRGHGFKGV-TSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQ 271
Query: 484 KGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFV 305
KG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++
Sbjct: 272 KGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYI 328
Query: 304 MIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPAXQGCIHG 128
M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A + G
Sbjct: 329 MLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMG 387
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 241 bits (589), Expect = 4e-64
Identities = 117/185 (63%), Positives = 140/185 (75%)
Frame = -1
Query: 682 SILCLPQDEMIDCIGVTQGQRIQRCHXSLAHKEATPRKTHKGLRKVACIGAWHPSRVSFT 503
SI + +MID IGVT+G + S H + PRKTHKGLRKVACIGAWHPSRV+FT
Sbjct: 159 SIRVIAHTQMIDTIGVTRGHGFKGV-TSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFT 217
Query: 502 VARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGE 323
VARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG
Sbjct: 218 VARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGI 274
Query: 322 VNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPAXQ 143
VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A +
Sbjct: 275 VNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEK 334
Query: 142 GCIHG 128
G
Sbjct: 335 RAFMG 339
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 241 bits (589), Expect = 4e-64
Identities = 117/185 (63%), Positives = 140/185 (75%)
Frame = -1
Query: 682 SILCLPQDEMIDCIGVTQGQRIQRCHXSLAHKEATPRKTHKGLRKVACIGAWHPSRVSFT 503
SI + +MID IGVT+G + S H + PRKTHKGLRKVACIGAWHPSRV+FT
Sbjct: 159 SIRVIAHTQMIDTIGVTRGHGFKGV-TSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFT 217
Query: 502 VARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGE 323
VARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG
Sbjct: 218 VARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGI 274
Query: 322 VNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPAXQ 143
VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A +
Sbjct: 275 VNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEK 334
Query: 142 GCIHG 128
G
Sbjct: 335 RAFMG 339
>AL021571-3|CAC70102.2| 344|Caenorhabditis elegans Hypothetical
protein T19A6.4 protein.
Length = 344
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +2
Query: 401 NNFAILFVDSLSNTIDFLVHFSTVMITFLTSTSYSERH-PRRMPSSNAGNFPKTLVCLTG 577
N FA L ++ L + L+ + +T +T Y P+ +PSS N+ +V + G
Sbjct: 72 NAFAFLIMNRLGLAVPILIWSTVSCLTGWATTRYGLFGVPKGIPSSVILNYIGIIVLVVG 131
Query: 578 GSFFV 592
SFF+
Sbjct: 132 SSFFL 136
>U00055-5|AAL06044.4| 1182|Caenorhabditis elegans Hypothetical protein
R02F2.2 protein.
Length = 1182
Score = 28.7 bits (61), Expect = 4.2
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +2
Query: 557 TLVCLTGGSFFVCQRXVTPLYPLXLGDTNAVNHF 658
TL+ +TG + F+C R T ++ + + + + +NHF
Sbjct: 1010 TLMYVTGQNVFLCGRKSTEVFVVDVFNLSIINHF 1043
>Z93383-7|CAB07621.1| 285|Caenorhabditis elegans Hypothetical
protein F54B8.8 protein.
Length = 285
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +2
Query: 371 QVILSRCIVFNNFAILFVDSLSNTIDFLVHFSTVMITFLTSTSYSERH 514
+V++ I + IL V ++ +T+ FLV V+ +F Y+ RH
Sbjct: 78 KVVIKNLIFLLIWPILLVGTVRSTLTFLVTMDRVIGSFFPIFYYNHRH 125
>Z83217-4|CAB05683.2| 1178|Caenorhabditis elegans Hypothetical protein
C10C6.6 protein.
Length = 1178
Score = 27.5 bits (58), Expect = 9.8
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +2
Query: 395 VFNNFAILFVDSLSNTIDFLVHFSTVM-ITFLTSTSYSERHPRRMPSSNAGNFPKTLVCL 571
+FN + +L V T+ F+VHFS ++ I L + +E+ P + + N T V +
Sbjct: 1030 IFNAYTLLTV-----TLQFIVHFSCLLYIVGLAHEANTEKAPVDLEAKFTPNILNTTVYI 1084
Query: 572 TGGSFFVC 595
+ VC
Sbjct: 1085 ISMALQVC 1092
>Z50874-11|CAA90766.1| 259|Caenorhabditis elegans Hypothetical
protein R10E4.5 protein.
Length = 259
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = -1
Query: 649 DCIGVTQGQRIQRCHXSLAH-KEATPRKTHKGLRKVACIGAWHP 521
+C+G+ + R L K +TP KT K L + W P
Sbjct: 131 ECVGIAVDTHVHRISNRLGWIKTSTPEKTQKALEILLPKSEWQP 174
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,288,784
Number of Sequences: 27780
Number of extensions: 355910
Number of successful extensions: 966
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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