Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_L04
         (786 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58738-4|AAB00604.1|  358|Caenorhabditis elegans Hypothetical pr...    32   0.53 
Z69302-8|CAA93261.3|  420|Caenorhabditis elegans Hypothetical pr...    31   0.93 
AF043700-1|AAB97571.2|  328|Caenorhabditis elegans Hypothetical ...    30   2.2  
Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical p...    29   5.0  
Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical pr...    29   5.0  

>U58738-4|AAB00604.1|  358|Caenorhabditis elegans Hypothetical
           protein F31A9.6 protein.
          Length = 358

 Score = 31.9 bits (69), Expect = 0.53
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = -1

Query: 693 VTLYKTCIRPVMTYASVVFVHAARTHIDTLQSXQSRFCR 577
           + LYKT IRP + Y +VV     ++   T++S Q+ F R
Sbjct: 221 ILLYKTFIRPRLEYGTVVSSPTKKSDEKTIESVQNAFTR 259


>Z69302-8|CAA93261.3|  420|Caenorhabditis elegans Hypothetical
           protein F40F8.5 protein.
          Length = 420

 Score = 31.1 bits (67), Expect = 0.93
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -1

Query: 417 PNPDHAGASHRRRPRHVLTDPSD 349
           PN DH G +H RR R+   DPSD
Sbjct: 242 PNVDHIGHNHHRRKRNHDDDPSD 264



 Score = 29.9 bits (64), Expect = 2.2
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -1

Query: 417 PNPDHAGASHRRRPRHVLTDPSD 349
           PN DH G +HRR+  H   DPSD
Sbjct: 198 PNVDHTGHNHRRKRNHD-DDPSD 219



 Score = 29.1 bits (62), Expect = 3.8
 Identities = 14/23 (60%), Positives = 15/23 (65%)
 Frame = -1

Query: 417 PNPDHAGASHRRRPRHVLTDPSD 349
           PN DH G +HRRR R    DPSD
Sbjct: 287 PNVDHTGHNHRRR-RDQDDDPSD 308


>AF043700-1|AAB97571.2|  328|Caenorhabditis elegans Hypothetical
           protein K09H9.4 protein.
          Length = 328

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -1

Query: 693 VTLYKTCIRPVMTYASVVFVHAARTHIDTLQSXQSRFCR 577
           + LYKT IRP + Y +VV     ++    ++S Q+ F R
Sbjct: 191 ILLYKTFIRPRLEYGTVVSSPTKKSDEKAIESVQNAFTR 229


>Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical
           protein C28A5.6 protein.
          Length = 1061

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 19/66 (28%), Positives = 33/66 (50%)
 Frame = +3

Query: 66  GQVGEQRLSQEGWDLLTATRAPPKET*QLKSSCFANESTTGSESRPAEKIRRETQRADSW 245
           G+VGE++ S++  D++  + AP  E  + +     NE     E    EK+  E ++A + 
Sbjct: 164 GEVGEKKESEQPTDMVEPSSAPTTEETETE-----NEEEDDKEKTDKEKLDAEKEKALAE 218

Query: 246 VRLHGE 263
            RL  E
Sbjct: 219 KRLERE 224


>Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical
           protein C28A5.6 protein.
          Length = 1061

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 19/66 (28%), Positives = 33/66 (50%)
 Frame = +3

Query: 66  GQVGEQRLSQEGWDLLTATRAPPKET*QLKSSCFANESTTGSESRPAEKIRRETQRADSW 245
           G+VGE++ S++  D++  + AP  E  + +     NE     E    EK+  E ++A + 
Sbjct: 164 GEVGEKKESEQPTDMVEPSSAPTTEETETE-----NEEEDDKEKTDKEKLDAEKEKALAE 218

Query: 246 VRLHGE 263
            RL  E
Sbjct: 219 KRLERE 224


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,318,887
Number of Sequences: 27780
Number of extensions: 283365
Number of successful extensions: 772
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 772
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)