Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_K14
         (742 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ...    41   8e-04
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.    41   8e-04
Z49911-7|CAA90129.1|  861|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z73976-4|CAA98287.2|  965|Caenorhabditis elegans Hypothetical pr...    29   4.6  
U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily ass...    28   8.0  
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass...    28   8.0  

>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
           protein.
          Length = 1829

 Score = 41.1 bits (92), Expect = 8e-04
 Identities = 17/63 (26%), Positives = 33/63 (52%)
 Frame = -2

Query: 681 TVEEVXSSXAXTDVDIQYADAXYENXTTYKLFQQHVXPMLVKENPKVPVSKLMMLVAAKW 502
           T EEV ++   TDV+  Y +  ++  +  K F   + P +++ NP   VSK+  +   K+
Sbjct: 81  TSEEVCAAIGLTDVEFDYDEEEFQGISNLKTFSSIIKPQILEANPGTNVSKMYPMFQVKY 140

Query: 501 RMF 493
           + +
Sbjct: 141 KEY 143


>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
          Length = 1829

 Score = 41.1 bits (92), Expect = 8e-04
 Identities = 17/63 (26%), Positives = 33/63 (52%)
 Frame = -2

Query: 681 TVEEVXSSXAXTDVDIQYADAXYENXTTYKLFQQHVXPMLVKENPKVPVSKLMMLVAAKW 502
           T EEV ++   TDV+  Y +  ++  +  K F   + P +++ NP   VSK+  +   K+
Sbjct: 81  TSEEVCAAIGLTDVEFDYDEEEFQGISNLKTFSSIIKPQILEANPGTNVSKMYPMFQVKY 140

Query: 501 RMF 493
           + +
Sbjct: 141 KEY 143


>Z49911-7|CAA90129.1|  861|Caenorhabditis elegans Hypothetical
           protein M28.9 protein.
          Length = 861

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = -2

Query: 207 KIKFSKRKRTSSEEEQEGSAVNSDSDA 127
           K K  K+K++  ++E+EGSA  +D DA
Sbjct: 731 KDKKKKKKKSKKDKEEEGSAEKADGDA 757


>Z73976-4|CAA98287.2|  965|Caenorhabditis elegans Hypothetical
           protein T07C12.8 protein.
          Length = 965

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 15/49 (30%), Positives = 31/49 (63%)
 Frame = -2

Query: 570 PMLVKENPKVPVSKLMMLVAAKWRMFCETNPHLSTSVPQSMGSEENTNT 424
           P LV +N +    K ++ +A K+ ++ E++P+L+T+ P    + +NTN+
Sbjct: 533 PTLVTDNDQEN-QKTLVDLAKKFGLWEESSPYLTTTHPPIARNTDNTNS 580


>U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily assigned
            gene nameprotein 308, isoform e protein.
          Length = 2702

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +2

Query: 587  NSLYVVXFSXSASAYCMSTSVXANEXHTSST 679
            ++L+++  S SA    +STS  +NE HT ST
Sbjct: 1219 DTLHLITLSNSAPHQILSTSGASNELHTIST 1249


>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
            gene nameprotein 308, isoform c protein.
          Length = 7548

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +2

Query: 587  NSLYVVXFSXSASAYCMSTSVXANEXHTSST 679
            ++L+++  S SA    +STS  +NE HT ST
Sbjct: 6065 DTLHLITLSNSAPHQILSTSGASNELHTIST 6095


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,838,949
Number of Sequences: 27780
Number of extensions: 191688
Number of successful extensions: 566
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 566
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)