Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_K13
         (734 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0302 - 2286171-2286341,2286747-2286968                           29   3.8  
06_01_1069 + 8731567-8731632,8732120-8732281,8733028-8733081,873...    29   3.8  
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18...    29   3.8  
01_06_0146 + 26969011-26969995,26970878-26970930                       29   5.1  
03_02_0198 + 6344952-6347483                                           28   6.7  
02_02_0718 - 13290764-13290897,13292375-13293041,13293364-132937...    28   8.8  
02_01_0158 - 1103461-1104186                                           28   8.8  

>12_01_0302 - 2286171-2286341,2286747-2286968
          Length = 130

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +2

Query: 80  RLQRSRKKHGEDLPTGGRSRRKGEKLE*MQREEQ 181
           RL+R RK +  D+   G  + +GEKLE  + +E+
Sbjct: 57  RLERLRKGYARDVRAAGAMKVRGEKLENWREKEK 90


>06_01_1069 +
           8731567-8731632,8732120-8732281,8733028-8733081,
           8733557-8733630,8733706-8733786,8734902-8735079,
           8735336-8735506,8736113-8736202,8736284-8736331,
           8736447-8736562,8736655-8736733,8737101-8737223
          Length = 413

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
 Frame = -3

Query: 666 KSPDXIHQPPPXLTSISINP------LTPX*KEFAPGLKPPLSSEAPSAYLTPSSLGMAK 505
           K+P    QP   + S++  P      +TP  +   P  +PP++S  P+A  TP++   A 
Sbjct: 89  KAPVSQSQPATPVASVARTPPPQAPVVTP--EPAPPSAQPPVASATPAAAATPAAAVTAS 146

Query: 504 GVSPPYFQVNDESQASRLISG 442
             +  Y Q      AS L+SG
Sbjct: 147 SDADVYSQA-----ASNLVSG 162


>05_01_0028 +
           182528-183852,183967-184127,184872-185116,185330-186073
          Length = 824

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 18/59 (30%), Positives = 24/59 (40%)
 Frame = -3

Query: 660 PDXIHQPPPXLTSISINPLTPX*KEFAPGLKPPLSSEAPSAYLTPSSLGMAKGVSPPYF 484
           P  +  PPP   SIS  P  P     AP   P  + + PS+   PS        + P+F
Sbjct: 93  PPLLPTPPPPPASISPTPAPPLPPPPAPAPPPTPTPKFPSSSANPSPPDAYPFTNYPFF 151


>01_06_0146 + 26969011-26969995,26970878-26970930
          Length = 345

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -1

Query: 710 PPXPXDCRVHQXXSSNPPIXYTNHPQX*HPFPSIP 606
           PP P D R  Q  ++ PP    + P    P PS+P
Sbjct: 88  PPLPHDNRTPQPRAAPPPAPAPDQPAPPSPPPSLP 122


>03_02_0198 + 6344952-6347483
          Length = 843

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
 Frame = +2

Query: 575 PGANSFXYGVRGLMEMDVXSGGG---WCMXSGDLMIXXDVPDNRXG 703
           PGA S     RGL + D+ +GG    W     D  I  +VP+ R G
Sbjct: 198 PGAFSMVIDARGLAKFDLLAGGEHRYWTTGLWDGEIFANVPEMRSG 243


>02_02_0718 -
           13290764-13290897,13292375-13293041,13293364-13293719,
           13294559-13294629,13295326-13295336
          Length = 412

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -1

Query: 440 IPRILRSPPPTHPLIEDVVMATNQAIIDYK 351
           +P++L+SPP T+  IED    +  + ID K
Sbjct: 382 LPQLLQSPPETYHAIEDGHNPSKTSFIDMK 411


>02_01_0158 - 1103461-1104186
          Length = 241

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = +2

Query: 545 GASDDNGGFNPGANSFXYGVRGLMEMDVXSGGG 643
           G    +GG  PG   F  G  G M  D  +GGG
Sbjct: 112 GGGRRSGGGGPGGGCFKCGESGHMARDCFNGGG 144


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,431,290
Number of Sequences: 37544
Number of extensions: 425215
Number of successful extensions: 1187
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1185
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)