Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_K08
         (819 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0490 + 22672241-22674679                                         30   1.9  
07_01_0080 + 587674-588510                                             29   3.4  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   5.9  

>01_05_0490 + 22672241-22674679
          Length = 812

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 17/69 (24%), Positives = 20/69 (28%)
 Frame = +2

Query: 428 PXXXPXXXAPTXRXPQSPXXPKXTPXPPXPXXPRXXXXGXXXXAXALXXKXXXXPAXXXX 607
           P   P    PT R  + P  P   P PP P  P+         A          P+    
Sbjct: 638 PPQPPPPPPPTTRRSRKPPQPPSRPAPPPPPPPQQQPPFYPRRAVVYYTYPLPPPSPPLP 697

Query: 608 TPXXPXXXP 634
            P  P   P
Sbjct: 698 PPPPPPPPP 706


>07_01_0080 + 587674-588510
          Length = 278

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 13/34 (38%), Positives = 14/34 (41%)
 Frame = +1

Query: 415 FPKXPPXXXPXPSSNXAXPPIXXXXKXHPXPPXP 516
           F + PP   P PSS    PP        P PP P
Sbjct: 88  FRRPPPPPPPPPSSGSPPPPPPPPPPPPPPPPPP 121


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 13/53 (24%), Positives = 17/53 (32%)
 Frame = +2

Query: 368 PXXQKPXSXXRXXSXSFXNXPXXXPXXXAPTXRXPQSPXXPKXTPXPPXPXXP 526
           P  + P       + +  +     P    P    P  P  PK  P PP P  P
Sbjct: 292 PGRESPSRPQSIAAAAVASPAPPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGP 344


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,532,310
Number of Sequences: 37544
Number of extensions: 139563
Number of successful extensions: 899
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 828
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2244686244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)