Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_K07
(667 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0751 + 24904854-24905640,24905747-24905805 33 0.20
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677... 30 1.9
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 25 2.2
08_02_1310 - 26037025-26038074 29 3.3
03_05_0732 - 27232299-27232535,27232717-27232746,27233094-272331... 25 4.1
03_06_0233 + 32530174-32530492,32531081-32531127,32531277-325314... 29 4.4
02_04_0557 + 23865202-23865437,23865469-23865997 29 4.4
04_04_0429 - 25150266-25150916 28 5.8
03_05_0234 - 22200754-22201476 28 5.8
01_05_0717 - 24571967-24572881 28 5.8
10_07_0161 - 13674631-13675433,13675793-13675862 28 7.7
07_03_1691 - 28726307-28726323,28726588-28726953,28727483-287275... 28 7.7
06_02_0257 - 13533689-13533714,13533799-13533925,13534013-135341... 28 7.7
>01_05_0751 + 24904854-24905640,24905747-24905805
Length = 281
Score = 33.1 bits (72), Expect = 0.20
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 66 ALQFLSGSTPRRPCGGGGWFG 128
A+ ++ + P PCGGGGW+G
Sbjct: 16 AVSTITATAPATPCGGGGWYG 36
>01_07_0188 -
41866689-41866763,41866889-41867155,41867277-41867722,
41867945-41868033,41868279-41868368,41868661-41868739,
41868979-41869042,41869597-41869684,41869776-41869836,
41869906-41869969,41870134-41870188,41870275-41870346,
41870469-41870551,41870629-41870724,41871279-41871383,
41872159-41872227,41872470-41872561,41872667-41872886
Length = 704
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 586 PXXXPPPPXXGGGGGXE 636
P PPPP GGGGG E
Sbjct: 14 PPQHPPPPQAGGGGGGE 30
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 582 PPXXXPPPPXXXGXGGG 632
PP PPPP G GGG
Sbjct: 13 PPPQHPPPPQAGGGGGG 29
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 25.0 bits (52), Expect(2) = 2.2
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 644 VGXSXPPPPPXXGG 603
+G PPPPP GG
Sbjct: 1104 IGAGAPPPPPPPGG 1117
Score = 23.0 bits (47), Expect(2) = 2.2
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -3
Query: 629 PPPPPXXGGGG 597
PPPPP G GG
Sbjct: 1149 PPPPPVGGLGG 1159
>08_02_1310 - 26037025-26038074
Length = 349
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1
Query: 637 SPPPPXPXXXGGGGXXXG 584
SPPPP P GGGG G
Sbjct: 151 SPPPPPPPSSGGGGGHIG 168
>03_05_0732 -
27232299-27232535,27232717-27232746,27233094-27233155,
27233975-27234005,27234618-27234713,27234881-27234969,
27235687-27236263
Length = 373
Score = 25.0 bits (52), Expect(2) = 4.1
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -1
Query: 127 PNQPPPPQGLRGVDPLKNWS 68
P PPPP G G P + WS
Sbjct: 81 PPPPPPPMGAPGFGPFR-WS 99
Score = 22.2 bits (45), Expect(2) = 4.1
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -1
Query: 151 WVGAXICRPNQPPPP 107
W+ P+QPPPP
Sbjct: 43 WIRRLHLLPHQPPPP 57
>03_06_0233 +
32530174-32530492,32531081-32531127,32531277-32531413,
32531673-32531841,32532598-32532885,32533021-32533107,
32533454-32534152,32534244-32534735
Length = 745
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 4/63 (6%)
Frame = +3
Query: 63 AALQFLSGSTPRRPCGGGGWFGRQIXAPTQFLXPGA----KTIFFXNXGGXXSQKPXXNL 230
AA + P+ GGGGW R + ++ + GA T+F + P +
Sbjct: 45 AAAEAEDAYPPQGGGGGGGWVSRLVDPASRLIAGGAARLFSTVFRKRLDPAPAPAPPKST 104
Query: 231 PPG 239
PPG
Sbjct: 105 PPG 107
>02_04_0557 + 23865202-23865437,23865469-23865997
Length = 254
Score = 28.7 bits (61), Expect = 4.4
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +1
Query: 586 PXXXPPPPXXGGGGGXE 636
P PPPP GGGGG +
Sbjct: 225 PAAAPPPPPYGGGGGGD 241
>04_04_0429 - 25150266-25150916
Length = 216
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -3
Query: 635 SXPPPPPXXGGGG 597
S PPPPP GGGG
Sbjct: 73 SSPPPPPRSGGGG 85
>03_05_0234 - 22200754-22201476
Length = 240
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -3
Query: 635 SXPPPPPXXGGGG 597
S PPPPP GGGG
Sbjct: 121 SSPPPPPAAGGGG 133
>01_05_0717 - 24571967-24572881
Length = 304
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1
Query: 598 PPPPXXGGGGGXE 636
PPPP GGGGG E
Sbjct: 14 PPPPRGGGGGGGE 26
>10_07_0161 - 13674631-13675433,13675793-13675862
Length = 290
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = -3
Query: 176 CFCP-RXQKLGWXXNLPPEPAAATAGPSWGGSAQELECCINTLHWLI 39
CF P Q+L W PP P + + SW GS L + L W I
Sbjct: 238 CFNPWPAQQLAWR---PPPPPSPLSWSSWAGSGGPLFPGTSHLRWAI 281
>07_03_1691 -
28726307-28726323,28726588-28726953,28727483-28727567,
28728255-28728387,28729793-28730328
Length = 378
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 586 PXXXPPPPXXGGGGGXEXPT 645
P PP P GGGGG PT
Sbjct: 24 PCPLPPIPSCGGGGGGAGPT 43
>06_02_0257 -
13533689-13533714,13533799-13533925,13534013-13534121,
13534193-13534272,13534758-13534979,13536070-13536318,
13537032-13537484,13539834-13540556
Length = 662
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 582 PPXXXPPPPXXXGXGGGG 635
PP PPPP GGGG
Sbjct: 63 PPPPPPPPPSSAAAGGGG 80
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,942,805
Number of Sequences: 37544
Number of extensions: 367508
Number of successful extensions: 2632
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2173
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1679486824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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