Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_K07
         (667 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical pr...    29   3.0  
AC024790-13|AAL32247.1|  311|Caenorhabditis elegans Hypothetical...    29   3.0  
AC024809-7|AAF59540.1|  315|Caenorhabditis elegans Hypothetical ...    29   3.9  
U55366-2|AAA97981.1|  156|Caenorhabditis elegans Hypothetical pr...    27   9.1  

>Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical
           protein E02A10.2 protein.
          Length = 385

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -2

Query: 657 GXXGGGXLXPPPXPXXGGG 601
           G  GGG   PPP P  GGG
Sbjct: 46  GGCGGGCAPPPPPPACGGG 64



 Score = 29.1 bits (62), Expect = 3.0
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -2

Query: 657 GXXGGGXLXPPPXPXXGGG 601
           G  GGG   PPP P  GGG
Sbjct: 103 GGCGGGCAPPPPPPACGGG 121


>Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical
           protein ZK643.8 protein.
          Length = 774

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 12/24 (50%), Positives = 12/24 (50%)
 Frame = -2

Query: 657 GXXGGGXLXPPPXPXXGGGGXXXG 586
           G  GGG   PPP P  GG G   G
Sbjct: 41  GCGGGGGCAPPPAPCGGGCGGGGG 64



 Score = 29.1 bits (62), Expect = 3.0
 Identities = 12/24 (50%), Positives = 12/24 (50%)
 Frame = -2

Query: 657 GXXGGGXLXPPPXPXXGGGGXXXG 586
           G  GGG   PPP P  GG G   G
Sbjct: 65  GCGGGGGCAPPPAPCGGGCGGGGG 88


>Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical
           protein ZK643.8 protein.
          Length = 774

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 12/24 (50%), Positives = 12/24 (50%)
 Frame = -2

Query: 657 GXXGGGXLXPPPXPXXGGGGXXXG 586
           G  GGG   PPP P  GG G   G
Sbjct: 41  GCGGGGGCAPPPAPCGGGCGGGGG 64



 Score = 29.1 bits (62), Expect = 3.0
 Identities = 12/24 (50%), Positives = 12/24 (50%)
 Frame = -2

Query: 657 GXXGGGXLXPPPXPXXGGGGXXXG 586
           G  GGG   PPP P  GG G   G
Sbjct: 65  GCGGGGGCAPPPAPCGGGCGGGGG 88


>AC024790-13|AAL32247.1|  311|Caenorhabditis elegans Hypothetical
           protein Y47D7A.13 protein.
          Length = 311

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -2

Query: 657 GXXGGGXLXPPPXPXXGGG 601
           G  GGG   PPP P  GGG
Sbjct: 22  GGGGGGCCAPPPPPPCGGG 40


>AC024809-7|AAF59540.1|  315|Caenorhabditis elegans Hypothetical
           protein Y53G8AR.9 protein.
          Length = 315

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -2

Query: 657 GXXGGGXLXPPPXPXXGGGG 598
           G  GG    PPP P  GGGG
Sbjct: 203 GSGGGSGRFPPPPPPYGGGG 222


>U55366-2|AAA97981.1|  156|Caenorhabditis elegans Hypothetical
           protein F41F3.3 protein.
          Length = 156

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = -2

Query: 648 GGGXLXPPPXPXXGGG 601
           GGG   PPP P  GGG
Sbjct: 62  GGGGCCPPPAPACGGG 77


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,081,879
Number of Sequences: 27780
Number of extensions: 201106
Number of successful extensions: 1071
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 898
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)