Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_K07
         (667 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   2.0  
DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    23   3.5  
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    23   3.5  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   4.6  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    21   8.0  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   8.0  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 127 PNQPPPPQGLRGVDPLKN 74
           P+Q PPP G  G  P +N
Sbjct: 42  PSQGPPPGGPPGAPPSQN 59


>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 65  CINTLHWLITLHES 24
           C N ++W+I LH S
Sbjct: 418 CFNLMYWIIYLHIS 431


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 65  CINTLHWLITLHES 24
           C N ++W+I LH S
Sbjct: 418 CFNLMYWIIYLHIS 431


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -3

Query: 629 PPPPPXXGG 603
           PPPPP  GG
Sbjct: 376 PPPPPIRGG 384


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = -1

Query: 130 RPNQPPPPQGLRGVDPLK 77
           +P  PPPP    G D  K
Sbjct: 340 KPAPPPPPPSSSGPDSAK 357


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 145 GAXICRPNQPPPPQGLRGV 89
           GA    P  P PP+G  GV
Sbjct: 387 GAQFATPCTPSPPRGPGGV 405


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,754
Number of Sequences: 438
Number of extensions: 3071
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)