Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_K05
         (699 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    30   1.5  
08_02_0743 - 20647440-20647927,20647997-20648426,20650127-206505...    28   8.2  
04_03_0904 + 20717005-20718087                                         28   8.2  

>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 22/69 (31%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
 Frame = -3

Query: 541 PPXXRXXGGXTPXXXGFFPPXGGXXXKKNPQKGRPP-FXKFXXTPXPPPXXKKPXRGKXP 365
           PP  R  G   P      PP      K+NP    PP        P PPP    P   K P
Sbjct: 719 PPANRSNGPSAPAPP-LPPPLPAAANKRNPPAPPPPPLMTGKKAPAPPP--PPPQAPKPP 775

Query: 364 NXLRXEPPL 338
             +   PPL
Sbjct: 776 GTVPPPPPL 784


>08_02_0743 -
           20647440-20647927,20647997-20648426,20650127-20650570,
           20650639-20650692
          Length = 471

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
 Frame = -3

Query: 448 KGRPPFXKFXXTPXPPPXXKKP-XRGKXP 365
           +GRPP  +    P PPP    P  RG+ P
Sbjct: 91  RGRPPKPRDPNAPPPPPKPSSPRPRGRPP 119


>04_03_0904 + 20717005-20718087
          Length = 360

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 20/74 (27%), Positives = 23/74 (31%)
 Frame = -3

Query: 541 PPXXRXXGGXTPXXXGFFPPXGGXXXKKNPQKGRPPFXKFXXTPXPPPXXKKPXRGKXPN 362
           PP  +     TP    + P       K  P+   PP  K    P PPP  K       P 
Sbjct: 195 PPSYKPQPKPTPTP--YTPTPTPPSYKPQPKPNPPPTYKPQPKPNPPPTYKPAPPTYKPQ 252

Query: 361 XLRXEPPLXKXGKK 320
                PP  K   K
Sbjct: 253 PKPNPPPTYKPQPK 266


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,002,608
Number of Sequences: 37544
Number of extensions: 256819
Number of successful extensions: 526
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 510
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)