Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_K03
         (767 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0578 + 4295386-4296489,4297394-4297507                          126   3e-29
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272...   123   2e-28
11_01_0205 + 1617044-1617197,1617845-1618233                           30   2.3  
06_03_1155 - 28065126-28065139,28065268-28065324,28065571-28066312     29   3.1  
06_03_1150 + 28022633-28023374,28023501-28023565                       29   3.1  
02_04_0073 - 19471254-19472681                                         29   5.4  
02_05_1166 - 34633770-34634301,34634559-34635181,34635279-34637216     28   7.1  
04_04_1266 + 32239451-32239829,32239874-32239884                       28   9.4  

>07_01_0578 + 4295386-4296489,4297394-4297507
          Length = 405

 Score =  126 bits (303), Expect = 3e-29
 Identities = 60/128 (46%), Positives = 83/128 (64%), Gaps = 1/128 (0%)
 Frame = -3

Query: 756 KGPLKIFXKD-QXXIGPFXXXPRVXXLNVNKXTFLKLXPGGHXGRXVIWTQSAFGRLDPL 580
           KGPL ++  +    +  F   P V   NV +   L L PGGH GR VIWT+SAF +L+ +
Sbjct: 209 KGPLIVYGTEGSKIVKAFRNLPGVDVANVERLNLLDLAPGGHLGRFVIWTESAFKKLEEV 268

Query: 579 FGSWKTPSKQKKNFNLPQPKMANTDLTRLXKSDEIRKVLRAPNKRVIRATRKLNPLTNNK 400
           +G+++ PS +KK F LP+PKMAN DL R+  SDE++ V++  NK V R  ++ NPL N  
Sbjct: 269 YGTFEAPSLKKKGFILPRPKMANADLGRIINSDEVQSVVKPLNKEVKRREKRKNPLKNVA 328

Query: 399 AMLKLNPY 376
           A+LKLNPY
Sbjct: 329 AVLKLNPY 336


>03_06_0298 -
           32925441-32925998,32926371-32926730,32927161-32927230,
           32927642-32927797,32929181-32929242,32929339-32929352,
           32930421-32930520,32931474-32932574
          Length = 806

 Score =  123 bits (296), Expect = 2e-28
 Identities = 60/128 (46%), Positives = 80/128 (62%), Gaps = 1/128 (0%)
 Frame = -3

Query: 756 KGPLKIFXKD-QXXIGPFXXXPRVXXLNVNKXTFLKLXPGGHXGRXVIWTQSAFGRLDPL 580
           KGPL ++  +    +  F   P V   NV +   L L PGGH GR VIWT+ AF +LD +
Sbjct: 208 KGPLIVYGTEGSKVVKAFRNLPGVDVANVERLNLLDLAPGGHLGRFVIWTECAFKKLDEV 267

Query: 579 FGSWKTPSKQKKNFNLPQPKMANTDLTRLXKSDEIRKVLRAPNKRVIRATRKLNPLTNNK 400
           +G + TP+ +KK F LP+PKMAN DL+RL  SDE++ V++  NK V     + NPL N  
Sbjct: 268 YGGFDTPALKKKGFVLPRPKMANADLSRLINSDEVQSVVKPINKEVKLREARRNPLKNVA 327

Query: 399 AMLKLNPY 376
           A+LKLNPY
Sbjct: 328 AVLKLNPY 335


>11_01_0205 + 1617044-1617197,1617845-1618233
          Length = 180

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +1

Query: 382 IEFQHRLVIGERVQFACSTDHAFVGSTEDL 471
           ++  HRLV G+  +F    +H FV S ++L
Sbjct: 35  LQISHRLVAGQNYEFQSGINHGFVNSRKNL 64


>06_03_1155 - 28065126-28065139,28065268-28065324,28065571-28066312
          Length = 270

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = -2

Query: 736 SXGSGFXWPFPXXXPXGXPEC*QXDLPEAGSGRSXWTF 623
           S GSGF +PFP   P   P       P +GSG   + F
Sbjct: 96  SAGSGFRFPFPLPLPFPAPASPGGAPPSSGSGFPAFPF 133


>06_03_1150 + 28022633-28023374,28023501-28023565
          Length = 268

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = -2

Query: 736 SXGSGFXWPFPXXXPXGXPEC*QXDLPEAGSGRSXWTF 623
           S GSGF +PFP   P   P       P +GSG   + F
Sbjct: 96  SAGSGFRFPFPLPLPFPAPASPGGAPPSSGSGFPAFPF 133


>02_04_0073 - 19471254-19472681
          Length = 475

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 608 SPHSAGLTPYSXHGRHHRNKR 546
           +P   G +P S HG HHR+++
Sbjct: 20  APRPRGASPLSSHGHHHRSRK 40


>02_05_1166 - 34633770-34634301,34634559-34635181,34635279-34637216
          Length = 1030

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
 Frame = -3

Query: 696 PRVXXLNVNKXTFLKLXPG--GHXGRXVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQP 523
           P V   N+    +L   PG  G  GR V+   SA   LDP F SW   S++ K F++ + 
Sbjct: 654 PSVISNNMWGDCWLIRAPGVDGCSGRYVV-AASAGNALDPGFCSWDYYSREAKAFHIEEI 712

Query: 522 KMANT 508
             A++
Sbjct: 713 SHASS 717


>04_04_1266 + 32239451-32239829,32239874-32239884
          Length = 129

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 19/47 (40%), Positives = 22/47 (46%)
 Frame = -1

Query: 629 DVXSFGLSPHSAGLTPYSXHGRHHRNKRRTSTCPSQRWPTLTSHVXS 489
           D  SF  SP    LT Y    R  R    +ST  S  WPT ++HV S
Sbjct: 39  DRPSFKTSPSRKTLTNY----RRTRVNYTSSTRQSISWPTASTHVLS 81


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,689,324
Number of Sequences: 37544
Number of extensions: 253659
Number of successful extensions: 480
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 480
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)