BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_K03
(767 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 142 2e-33
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 142 2e-33
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 142 2e-33
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 142 2e-33
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 142 2e-33
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 142 2e-33
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 142 2e-33
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 142 2e-33
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 142 2e-33
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 142 2e-33
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 142 2e-33
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 142 2e-33
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 142 2e-33
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 138 3e-32
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 142 bits (343), Expect = 2e-33
Identities = 65/127 (51%), Positives = 84/127 (66%)
Frame = -3
Query: 756 KGPLKIFXKDQXXIGPFXXXPRVXXLNVNKXTFLKLXPGGHXGRXVIWTQSAFGRLDPLF 577
+GP I+ +D I F P + LNV+K LKL PGGH GR IWT+SAF +LD L+
Sbjct: 204 RGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELY 263
Query: 576 GSWKTPSKQKKNFNLPQPKMANTDLTRLXKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 397
G+W+ + K N+NLP KM NTDL+R+ KS EI++ LRAP K++ R K NPL N +
Sbjct: 264 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRI 323
Query: 396 MLKLNPY 376
MLKLNPY
Sbjct: 324 MLKLNPY 330
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 142 bits (343), Expect = 2e-33
Identities = 65/127 (51%), Positives = 84/127 (66%)
Frame = -3
Query: 756 KGPLKIFXKDQXXIGPFXXXPRVXXLNVNKXTFLKLXPGGHXGRXVIWTQSAFGRLDPLF 577
+GP I+ +D I F P + LNV+K LKL PGGH GR IWT+SAF +LD L+
Sbjct: 205 RGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELY 264
Query: 576 GSWKTPSKQKKNFNLPQPKMANTDLTRLXKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 397
G+W+ + K N+NLP KM NTDL+R+ KS EI++ LRAP K++ R K NPL N +
Sbjct: 265 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRI 324
Query: 396 MLKLNPY 376
MLKLNPY
Sbjct: 325 MLKLNPY 331
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 142 bits (343), Expect = 2e-33
Identities = 65/127 (51%), Positives = 84/127 (66%)
Frame = -3
Query: 756 KGPLKIFXKDQXXIGPFXXXPRVXXLNVNKXTFLKLXPGGHXGRXVIWTQSAFGRLDPLF 577
+GP I+ +D I F P + LNV+K LKL PGGH GR IWT+SAF +LD L+
Sbjct: 205 RGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELY 264
Query: 576 GSWKTPSKQKKNFNLPQPKMANTDLTRLXKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 397
G+W+ + K N+NLP KM NTDL+R+ KS EI++ LRAP K++ R K NPL N +
Sbjct: 265 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRI 324
Query: 396 MLKLNPY 376
MLKLNPY
Sbjct: 325 MLKLNPY 331
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 142 bits (343), Expect = 2e-33
Identities = 65/127 (51%), Positives = 84/127 (66%)
Frame = -3
Query: 756 KGPLKIFXKDQXXIGPFXXXPRVXXLNVNKXTFLKLXPGGHXGRXVIWTQSAFGRLDPLF 577
+GP I+ +D I F P + LNV+K LKL PGGH GR IWT+SAF +LD L+
Sbjct: 205 RGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELY 264
Query: 576 GSWKTPSKQKKNFNLPQPKMANTDLTRLXKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 397
G+W+ + K N+NLP KM NTDL+R+ KS EI++ LRAP K++ R K NPL N +
Sbjct: 265 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRI 324
Query: 396 MLKLNPY 376
MLKLNPY
Sbjct: 325 MLKLNPY 331
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 142 bits (343), Expect = 2e-33
Identities = 65/127 (51%), Positives = 84/127 (66%)
Frame = -3
Query: 756 KGPLKIFXKDQXXIGPFXXXPRVXXLNVNKXTFLKLXPGGHXGRXVIWTQSAFGRLDPLF 577
+GP I+ +D I F P + LNV+K LKL PGGH GR IWT+SAF +LD L+
Sbjct: 205 RGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELY 264
Query: 576 GSWKTPSKQKKNFNLPQPKMANTDLTRLXKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 397
G+W+ + K N+NLP KM NTDL+R+ KS EI++ LRAP K++ R K NPL N +
Sbjct: 265 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRI 324
Query: 396 MLKLNPY 376
MLKLNPY
Sbjct: 325 MLKLNPY 331
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 142 bits (343), Expect = 2e-33
Identities = 65/127 (51%), Positives = 84/127 (66%)
Frame = -3
Query: 756 KGPLKIFXKDQXXIGPFXXXPRVXXLNVNKXTFLKLXPGGHXGRXVIWTQSAFGRLDPLF 577
+GP I+ +D I F P + LNV+K LKL PGGH GR IWT+SAF +LD L+
Sbjct: 205 RGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELY 264
Query: 576 GSWKTPSKQKKNFNLPQPKMANTDLTRLXKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 397
G+W+ + K N+NLP KM NTDL+R+ KS EI++ LRAP K++ R K NPL N +
Sbjct: 265 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRI 324
Query: 396 MLKLNPY 376
MLKLNPY
Sbjct: 325 MLKLNPY 331
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 142 bits (343), Expect = 2e-33
Identities = 65/127 (51%), Positives = 84/127 (66%)
Frame = -3
Query: 756 KGPLKIFXKDQXXIGPFXXXPRVXXLNVNKXTFLKLXPGGHXGRXVIWTQSAFGRLDPLF 577
+GP I+ +D I F P + LNV+K LKL PGGH GR IWT+SAF +LD L+
Sbjct: 205 RGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELY 264
Query: 576 GSWKTPSKQKKNFNLPQPKMANTDLTRLXKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 397
G+W+ + K N+NLP KM NTDL+R+ KS EI++ LRAP K++ R K NPL N +
Sbjct: 265 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRI 324
Query: 396 MLKLNPY 376
MLKLNPY
Sbjct: 325 MLKLNPY 331
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 142 bits (343), Expect = 2e-33
Identities = 65/127 (51%), Positives = 84/127 (66%)
Frame = -3
Query: 756 KGPLKIFXKDQXXIGPFXXXPRVXXLNVNKXTFLKLXPGGHXGRXVIWTQSAFGRLDPLF 577
+GP I+ +D I F P + LNV+K LKL PGGH GR IWT+SAF +LD L+
Sbjct: 205 RGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELY 264
Query: 576 GSWKTPSKQKKNFNLPQPKMANTDLTRLXKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 397
G+W+ + K N+NLP KM NTDL+R+ KS EI++ LRAP K++ R K NPL N +
Sbjct: 265 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRI 324
Query: 396 MLKLNPY 376
MLKLNPY
Sbjct: 325 MLKLNPY 331
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 142 bits (343), Expect = 2e-33
Identities = 65/127 (51%), Positives = 84/127 (66%)
Frame = -3
Query: 756 KGPLKIFXKDQXXIGPFXXXPRVXXLNVNKXTFLKLXPGGHXGRXVIWTQSAFGRLDPLF 577
+GP I+ +D I F P + LNV+K LKL PGGH GR IWT+SAF +LD L+
Sbjct: 205 RGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELY 264
Query: 576 GSWKTPSKQKKNFNLPQPKMANTDLTRLXKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 397
G+W+ + K N+NLP KM NTDL+R+ KS EI++ LRAP K++ R K NPL N +
Sbjct: 265 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRI 324
Query: 396 MLKLNPY 376
MLKLNPY
Sbjct: 325 MLKLNPY 331
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 142 bits (343), Expect = 2e-33
Identities = 65/127 (51%), Positives = 84/127 (66%)
Frame = -3
Query: 756 KGPLKIFXKDQXXIGPFXXXPRVXXLNVNKXTFLKLXPGGHXGRXVIWTQSAFGRLDPLF 577
+GP I+ +D I F P + LNV+K LKL PGGH GR IWT+SAF +LD L+
Sbjct: 205 RGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELY 264
Query: 576 GSWKTPSKQKKNFNLPQPKMANTDLTRLXKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 397
G+W+ + K N+NLP KM NTDL+R+ KS EI++ LRAP K++ R K NPL N +
Sbjct: 265 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRI 324
Query: 396 MLKLNPY 376
MLKLNPY
Sbjct: 325 MLKLNPY 331
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 142 bits (343), Expect = 2e-33
Identities = 65/127 (51%), Positives = 84/127 (66%)
Frame = -3
Query: 756 KGPLKIFXKDQXXIGPFXXXPRVXXLNVNKXTFLKLXPGGHXGRXVIWTQSAFGRLDPLF 577
+GP I+ +D I F P + LNV+K LKL PGGH GR IWT+SAF +LD L+
Sbjct: 205 RGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELY 264
Query: 576 GSWKTPSKQKKNFNLPQPKMANTDLTRLXKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 397
G+W+ + K N+NLP KM NTDL+R+ KS EI++ LRAP K++ R K NPL N +
Sbjct: 265 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRI 324
Query: 396 MLKLNPY 376
MLKLNPY
Sbjct: 325 MLKLNPY 331
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 142 bits (343), Expect = 2e-33
Identities = 65/127 (51%), Positives = 84/127 (66%)
Frame = -3
Query: 756 KGPLKIFXKDQXXIGPFXXXPRVXXLNVNKXTFLKLXPGGHXGRXVIWTQSAFGRLDPLF 577
+GP I+ +D I F P + LNV+K LKL PGGH GR IWT+SAF +LD L+
Sbjct: 219 RGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELY 278
Query: 576 GSWKTPSKQKKNFNLPQPKMANTDLTRLXKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 397
G+W+ + K N+NLP KM NTDL+R+ KS EI++ LRAP K++ R K NPL N +
Sbjct: 279 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRI 338
Query: 396 MLKLNPY 376
MLKLNPY
Sbjct: 339 MLKLNPY 345
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 142 bits (343), Expect = 2e-33
Identities = 65/127 (51%), Positives = 84/127 (66%)
Frame = -3
Query: 756 KGPLKIFXKDQXXIGPFXXXPRVXXLNVNKXTFLKLXPGGHXGRXVIWTQSAFGRLDPLF 577
+GP I+ +D I F P + LNV+K LKL PGGH GR IWT+SAF +LD L+
Sbjct: 205 RGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELY 264
Query: 576 GSWKTPSKQKKNFNLPQPKMANTDLTRLXKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 397
G+W+ + K N+NLP KM NTDL+R+ KS EI++ LRAP K++ R K NPL N +
Sbjct: 265 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRI 324
Query: 396 MLKLNPY 376
MLKLNPY
Sbjct: 325 MLKLNPY 331
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 138 bits (333), Expect = 3e-32
Identities = 63/127 (49%), Positives = 83/127 (65%)
Frame = -3
Query: 756 KGPLKIFXKDQXXIGPFXXXPRVXXLNVNKXTFLKLXPGGHXGRXVIWTQSAFGRLDPLF 577
+GP I+ +D I F P + LNV+K LKL PGGH GR IW +SAF +LD L+
Sbjct: 205 RGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWIESAFRKLDELY 264
Query: 576 GSWKTPSKQKKNFNLPQPKMANTDLTRLXKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 397
G+W+ + K N+NLP +M NTDL+R+ KS EI++ LRAP K++ R K NPL N +
Sbjct: 265 GTWRKAASLKSNYNLPMHEMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRI 324
Query: 396 MLKLNPY 376
MLKLNPY
Sbjct: 325 MLKLNPY 331
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,636,717
Number of Sequences: 237096
Number of extensions: 1417173
Number of successful extensions: 2089
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2089
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -