Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_J24
         (750 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80841-1|AAB37939.1|  477|Caenorhabditis elegans Hypothetical pr...    28   6.2  
AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical ...    28   8.1  

>U80841-1|AAB37939.1|  477|Caenorhabditis elegans Hypothetical
           protein C13A10.1 protein.
          Length = 477

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 22/66 (33%), Positives = 26/66 (39%)
 Frame = -1

Query: 720 PTTCXLXRSSSVLGCTIVTKWIS*LTKRIYSMFESGAWXVTDLSSAVQSQDRGEVEARVX 541
           PT   + R   V GC  V      +  R+   F  GAW   DL   +  QD G   A V 
Sbjct: 404 PTRIYVTRQHLVSGCVTVLSTPGYVEYRLSGKFGGGAWTGDDL--MIWYQDMG--GAYVA 459

Query: 540 MFQMSF 523
            FQ  F
Sbjct: 460 TFQFKF 465


>AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical
           protein Y39B6A.1 protein.
          Length = 735

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 11/28 (39%), Positives = 12/28 (42%)
 Frame = +1

Query: 469 HHGEHGAGRQRVCRGASPERHLEHXHAS 552
           HHG HGA           E H +H H S
Sbjct: 623 HHGHHGAHHHHAPHHEHHEHHGDHHHGS 650


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,871,820
Number of Sequences: 27780
Number of extensions: 207144
Number of successful extensions: 594
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 593
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)