Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_J19
(770 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 38 0.010
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 36 0.024
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 36 0.042
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 32 0.39
Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical pr... 32 0.52
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 32 0.52
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 32 0.52
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 32 0.52
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.52
U61288-1|AAB17543.1| 790|Caenorhabditis elegans CE protein. 32 0.52
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 32 0.52
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 32 0.52
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.52
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 32 0.52
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 32 0.52
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.52
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.52
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.52
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 0.69
Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical pr... 31 0.91
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 0.91
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 0.91
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 0.91
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 0.91
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 0.91
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 31 1.2
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 30 1.6
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 30 1.6
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 30 1.6
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 30 1.6
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 30 2.1
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 2.8
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 2.8
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 2.8
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 3.7
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 29 3.7
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 28 6.4
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 28 6.4
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 28 6.4
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 28 8.5
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 28 8.5
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 37.5 bits (83), Expect = 0.010
Identities = 21/50 (42%), Positives = 21/50 (42%)
Frame = +3
Query: 354 PSPVPPXXXPXCXAXXAPXPLVXPXPRGXXPPAXSXXXPXX*PLPVPPPP 503
P P PP P C AP PL P P PP P P P PPPP
Sbjct: 27 PPPCPPPPPPMC----APPPLPCPPP-PICPPQFCPPPPMCPPPPPPPPP 71
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/63 (28%), Positives = 21/63 (33%)
Frame = +3
Query: 354 PSPVPPXXXPXCXAXXAPXPLVXPXPRGXXPPAXSXXXPXX*PLPVPPPPXXGXXEXXVX 533
P P+P P C P P + P P PP P P PP P +
Sbjct: 40 PPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMC-------PPPPPPMPSYSPCQSYAP 92
Query: 534 XPV 542
PV
Sbjct: 93 APV 95
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 36.3 bits (80), Expect = 0.024
Identities = 20/50 (40%), Positives = 21/50 (42%)
Frame = +3
Query: 354 PSPVPPXXXPXCXAXXAPXPLVXPXPRGXXPPAXSXXXPXX*PLPVPPPP 503
PSP PP P P + P P PP P PLPVPPPP
Sbjct: 1336 PSPPPPPPPPP-----PPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPP 1380
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/65 (24%), Positives = 20/65 (30%)
Frame = +1
Query: 355 PPPXPXAXRXXAXPXXPQXPLSXPXPEAXXPXPXPXXNXXXNRXXXLLPPXXXXXRXPXX 534
PPP P + P P P + P P P + L PP
Sbjct: 1343 PPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPPPLPSEEKK 1402
Query: 535 XPLPS 549
PLP+
Sbjct: 1403 NPLPT 1407
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 35.5 bits (78), Expect = 0.042
Identities = 27/84 (32%), Positives = 30/84 (35%)
Frame = +1
Query: 352 SPPPXPXAXRXXAXPXXPQXPLSXPXPEAXXPXPXPXXNXXXNRXXXLLPPXXXXXRXPX 531
SPPP P R P PQ P P P P P P + +R P R P
Sbjct: 59 SPPPAP---RPSGQPPGPQGPSDLPGPSGAPPGP-PHPSGPPHR------PHPHPSRRPR 108
Query: 532 XXPLPSPXRSXCPXAAXPAXXXXG 603
LP P RS A P+ G
Sbjct: 109 PTRLPRPSRSPHSDAPEPSAATDG 132
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 33.1 bits (72), Expect = 0.23
Identities = 23/70 (32%), Positives = 24/70 (34%)
Frame = +3
Query: 345 TXFPSPVPPXXXPXCXAXXAPXPLVXPXPRGXXPPAXSXXXPXX*PLPVPPPPXXGXXEX 524
T F P PP P +P P P PP S P P P PPPP
Sbjct: 319 TTFILPPPP---PPMKLDPSPQPAATPVEITEIPPIISPPAPP--PPPPPPPPPPPPQTP 373
Query: 525 XVXXPVAFSP 554
V FSP
Sbjct: 374 SASSSVTFSP 383
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 32.3 bits (70), Expect = 0.39
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = -2
Query: 502 GGGGTGSG*XXGXXXEXAGGXXPRGXGXTRGXGAXXAXQXGXXXGGTGEG 353
GGGG G G +GG G G G G G GG G G
Sbjct: 803 GGGGGSGGSGGGGSNSNSGGGGGNGGGGNGGGGNGNGGGAGDGNGGAGAG 852
Score = 31.9 bits (69), Expect = 0.52
Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Frame = -2
Query: 502 GGGGTGSG*XXGXXXEXAGGXXPRGXGXTRGXGAXXAXQXGXXXG-GTGEG 353
GGGG G+G G AG G G G GA G G G G G
Sbjct: 832 GGGGNGNGGGAGDGNGGAGAGNGNGAGAGNGNGAGAGNGNGAGAGNGNGAG 882
Score = 31.1 bits (67), Expect = 0.91
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = -2
Query: 502 GGGGTGSG*XXGXXXEXAGGXXPRGXGXTRGXGAXXAXQXGXXXGGTGEG 353
GGGG G+G G GG G G + G GG G G
Sbjct: 788 GGGGGGNGGSGGGGGGGGGGSGGSGGGGSNSNSGGGGGNGGGGNGGGGNG 837
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/66 (25%), Positives = 21/66 (31%)
Frame = -2
Query: 502 GGGGTGSG*XXGXXXEXAGGXXPRGXGXTRGXGAXXAXQXGXXXGGTGEGXXVXSAXHPR 323
G GG G G G GG G G GG G+G A +
Sbjct: 796 GSGGGGGGGGGGSGGSGGGGSNSNSGGGGGNGGGGNGGGGNGNGGGAGDGNGGAGAGNGN 855
Query: 322 RSGASS 305
+GA +
Sbjct: 856 GAGAGN 861
Score = 28.3 bits (60), Expect = 6.4
Identities = 19/57 (33%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Frame = -2
Query: 502 GGGGTGSG*XXGXXXEXAGGXXPRGXGXTRGXGAXXAXQXGXXXG-GTGEGXXVXSA 335
GG G G+G AG G G G GA G G G G G SA
Sbjct: 840 GGAGDGNGGAGAGNGNGAGAGNGNGAGAGNGNGAGAGNGNGAGAGNGNGAGAGDASA 896
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = -2
Query: 502 GGGGTGSG*XXGXXXEXAGGXXPRGXGXTRGXGAXXAXQXGXXXGGTGEG 353
GGG GSG G +GG G G G G GG G G
Sbjct: 791 GGGNGGSGGGGGGGGGGSGGSGGGGSNSNSGGGGGNGG-GGNGGGGNGNG 839
>Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical
protein R08B4.1a protein.
Length = 1137
Score = 31.9 bits (69), Expect = 0.52
Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Frame = -2
Query: 502 GGGGTGSG*XXGXXXEXAGGXXPRGXGXTRGXGAXXAXQXGXXXG-GTGEG 353
GGGG G+G G AG G G G GA G G G G G
Sbjct: 809 GGGGNGNGGGAGDGNGGAGAGNGNGAGAGNGNGAGAGNGNGAGAGNGNGAG 859
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = -2
Query: 511 PXXGGGGTGSG*XXGXXXEXAGGXXPRGXGXTRGXGAXXAXQXGXXXGGTGEG 353
P GG SG G +GG G G G G G GG G G
Sbjct: 777 PTLGGPTGSSGGGGGGSNSNSGGGGGNGGGGNGGGGNGNGGGAGDGNGGAGAG 829
Score = 28.3 bits (60), Expect = 6.4
Identities = 19/57 (33%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Frame = -2
Query: 502 GGGGTGSG*XXGXXXEXAGGXXPRGXGXTRGXGAXXAXQXGXXXG-GTGEGXXVXSA 335
GG G G+G AG G G G GA G G G G G SA
Sbjct: 817 GGAGDGNGGAGAGNGNGAGAGNGNGAGAGNGNGAGAGNGNGAGAGNGNGAGAGDASA 873
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 31.9 bits (69), Expect = 0.52
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = +1
Query: 322 GGGGARXQXXSPPPXPXAXRXXAXPXXPQXPLSXPXPEAXXPXPXP 459
GGG R Q PPP P + P P P PE P P P
Sbjct: 86 GGGYGRPQGYVPPPPPPPTQPEPEPEPRPEPQPEPQPE-PQPEPQP 130
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 31.9 bits (69), Expect = 0.52
Identities = 19/67 (28%), Positives = 19/67 (28%), Gaps = 1/67 (1%)
Frame = +3
Query: 354 PSPVPPXXXPXCXAXXAPXPLVXPXPRGXXPPAXSXXX-PXX*PLPVPPPPXXGXXEXXV 530
P P PP P C P PP P P PPPP G
Sbjct: 765 PPPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPPPPPGGLMHVAA 824
Query: 531 XXPVAFS 551
PV S
Sbjct: 825 SAPVLMS 831
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 31.9 bits (69), Expect = 0.52
Identities = 19/67 (28%), Positives = 19/67 (28%), Gaps = 1/67 (1%)
Frame = +3
Query: 354 PSPVPPXXXPXCXAXXAPXPLVXPXPRGXXPPAXSXXX-PXX*PLPVPPPPXXGXXEXXV 530
P P PP P C P PP P P PPPP G
Sbjct: 765 PPPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPPPPPGGLMHVAA 824
Query: 531 XXPVAFS 551
PV S
Sbjct: 825 SAPVLMS 831
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.9 bits (69), Expect = 0.52
Identities = 18/68 (26%), Positives = 20/68 (29%)
Frame = +1
Query: 355 PPPXPXAXRXXAXPXXPQXPLSXPXPEAXXPXPXPXXNXXXNRXXXLLPPXXXXXRXPXX 534
PPP P + P P P P P P + PP R P
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGG 346
Query: 535 XPLPSPXR 558
P P P R
Sbjct: 347 MPPPPPPR 354
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = +3
Query: 345 TXFPSPVPPXXXPXCXAXXAPXPLVXPXPRGXXPPAXSXXXPXX*PLPVPPPP 503
T P P+PP P P P P PP P P PPPP
Sbjct: 271 TPMPPPMPPT--PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 321
>U61288-1|AAB17543.1| 790|Caenorhabditis elegans CE protein.
Length = 790
Score = 31.9 bits (69), Expect = 0.52
Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Frame = -2
Query: 502 GGGGTGSG*XXGXXXEXAGGXXPRGXGXTRGXGAXXAXQXGXXXG-GTGEG 353
GGGG G+G G AG G G G GA G G G G G
Sbjct: 462 GGGGNGNGGGAGDGNGGAGAGNGNGAGAGNGNGAGAGNGNGAGAGNGNGAG 512
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = -2
Query: 511 PXXGGGGTGSG*XXGXXXEXAGGXXPRGXGXTRGXGAXXAXQXGXXXGGTGEG 353
P GG SG G +GG G G G G G GG G G
Sbjct: 430 PTLGGPTGSSGSGGGGSNSNSGGGGGNGGGGNGGGGNGNGGGAGDGNGGAGAG 482
Score = 28.3 bits (60), Expect = 6.4
Identities = 19/57 (33%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Frame = -2
Query: 502 GGGGTGSG*XXGXXXEXAGGXXPRGXGXTRGXGAXXAXQXGXXXG-GTGEGXXVXSA 335
GG G G+G AG G G G GA G G G G G SA
Sbjct: 470 GGAGDGNGGAGAGNGNGAGAGNGNGAGAGNGNGAGAGNGNGAGAGNGNGAGAGDASA 526
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 31.9 bits (69), Expect = 0.52
Identities = 19/50 (38%), Positives = 19/50 (38%)
Frame = -2
Query: 502 GGGGTGSG*XXGXXXEXAGGXXPRGXGXTRGXGAXXAXQXGXXXGGTGEG 353
GGGG G G G GG G G RG G G GG G G
Sbjct: 85 GGGGNGGG---GRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGGG 131
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/50 (36%), Positives = 19/50 (38%)
Frame = -2
Query: 502 GGGGTGSG*XXGXXXEXAGGXXPRGXGXTRGXGAXXAXQXGXXXGGTGEG 353
GGGG G G G GG G G G G + G GG G G
Sbjct: 90 GGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGG---GGRGRG 136
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = -2
Query: 502 GGGGTGSG*XXGXXXEXAGGXXPRGXGXTRGXGAXXAXQXGXXXGGTGEG 353
GGGG+G G G GG G G G G GG G G
Sbjct: 58 GGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGG 107
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 31.9 bits (69), Expect = 0.52
Identities = 23/85 (27%), Positives = 29/85 (34%)
Frame = +1
Query: 334 ARXQXXSPPPXPXAXRXXAXPXXPQXPLSXPXPEAXXPXPXPXXNXXXNRXXXLLPPXXX 513
A+ Q +PPP P A P P P P P P + N PP
Sbjct: 43 AQPQQTAPPPPPAPYPQQAVPAPAPPPAPYPQHAVPAPAP-PLASYPQNAVPVPAPPPAP 101
Query: 514 XXRXPXXXPLPSPXRSXCPXAAXPA 588
+ P P+P + P A PA
Sbjct: 102 YPQ--HAVPAPAPPPAPYPQHAVPA 124
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.9 bits (69), Expect = 0.52
Identities = 18/68 (26%), Positives = 20/68 (29%)
Frame = +1
Query: 355 PPPXPXAXRXXAXPXXPQXPLSXPXPEAXXPXPXPXXNXXXNRXXXLLPPXXXXXRXPXX 534
PPP P + P P P P P P + PP R P
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGG 356
Query: 535 XPLPSPXR 558
P P P R
Sbjct: 357 MPPPPPPR 364
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = +3
Query: 345 TXFPSPVPPXXXPXCXAXXAPXPLVXPXPRGXXPPAXSXXXPXX*PLPVPPPP 503
T P P+PP P P P P PP P P PPPP
Sbjct: 281 TPMPPPMPPT--PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 331
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 31.9 bits (69), Expect = 0.52
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = -2
Query: 502 GGGGTGSG*XXGXXXEXAGGXXPRGXGXTRGXGAXXAXQXGXXXGGTGEG 353
GGGG G G G GG R G G G G GG G G
Sbjct: 219 GGGGGGGGYGSGGGWGGGGGGRDRDRGGWGGGGGGRGYGGGGGGGGYGYG 268
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = -2
Query: 502 GGGGTGSG*XXGXXXEXAGGXXPRGXGXTRGXGAXXAXQXGXXXGGTGEG 353
GG G G G G GG G G R G G GG G G
Sbjct: 213 GGSGGGGGGGGGGGYGSGGGWGGGGGGRDRDRGGWGGGGGGRGYGGGGGG 262
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 31.9 bits (69), Expect = 0.52
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = -1
Query: 452 GXGXXASGXGXDKGXWGXXGXAXWRXAXGXGGGE 351
G G G G G WG G W G GGG+
Sbjct: 34 GWGGNRWGGGGGPGGWGNNGGGGWGRGGGRGGGD 67
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/65 (27%), Positives = 19/65 (29%)
Frame = -1
Query: 545 GNGXXNGXLXXXXXGGRRXXXRLXXXXXXGXGXGXXASGXGXDKGXWGXXGXAXWRXAXG 366
GNG G GGR R G G G D G G G G
Sbjct: 80 GNGGGRGDWGGNGGGGRGGGGRGDWGGNNNGGGGNWGGGGNNDGGWGGNNGGGGGGRGGG 139
Query: 365 XGGGE 351
GG+
Sbjct: 140 GRGGD 144
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.9 bits (69), Expect = 0.52
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = +3
Query: 354 PSPVPPXXXPXCXAXXAPXPLVXPXPRGXXPPAXSXXXPXX*PLPVPPPPXXG 512
P P PP P +P P P G PP + P P PPPP G
Sbjct: 238 PPPPPPKGSPPLAGSGSPPP---PPAAGSPPPPRTGSPPPP-PTGSPPPPPAG 286
Score = 28.7 bits (61), Expect = 4.8
Identities = 24/88 (27%), Positives = 27/88 (30%), Gaps = 4/88 (4%)
Frame = +3
Query: 303 GDEAPERRGWXAXX-TXFPSPVPPXXXPXCXAXXAPXPLVXPX---PRGXXPPAXSXXXP 470
G P R G T P P P P +P P P P G PP + P
Sbjct: 262 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP 321
Query: 471 XX*PLPVPPPPXXGXXEXXVXXPVAFSP 554
PPPP + P SP
Sbjct: 322 PPAGTGSPPPPPRQKRQAPERSPPTGSP 349
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.9 bits (69), Expect = 0.52
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = +3
Query: 354 PSPVPPXXXPXCXAXXAPXPLVXPXPRGXXPPAXSXXXPXX*PLPVPPPPXXG 512
P P PP P +P P P G PP + P P PPPP G
Sbjct: 259 PPPPPPKGSPPLAGSGSPPP---PPAAGSPPPPRTGSPPPP-PTGSPPPPPAG 307
Score = 28.7 bits (61), Expect = 4.8
Identities = 24/88 (27%), Positives = 27/88 (30%), Gaps = 4/88 (4%)
Frame = +3
Query: 303 GDEAPERRGWXAXX-TXFPSPVPPXXXPXCXAXXAPXPLVXPX---PRGXXPPAXSXXXP 470
G P R G T P P P P +P P P P G PP + P
Sbjct: 283 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP 342
Query: 471 XX*PLPVPPPPXXGXXEXXVXXPVAFSP 554
PPPP + P SP
Sbjct: 343 PPAGTGSPPPPPRQKRQAPERSPPTGSP 370
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.9 bits (69), Expect = 0.52
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = +3
Query: 354 PSPVPPXXXPXCXAXXAPXPLVXPXPRGXXPPAXSXXXPXX*PLPVPPPPXXG 512
P P PP P +P P P G PP + P P PPPP G
Sbjct: 244 PPPPPPKGSPPLAGSGSPPP---PPAAGSPPPPRTGSPPPP-PTGSPPPPPAG 292
Score = 28.7 bits (61), Expect = 4.8
Identities = 24/88 (27%), Positives = 27/88 (30%), Gaps = 4/88 (4%)
Frame = +3
Query: 303 GDEAPERRGWXAXX-TXFPSPVPPXXXPXCXAXXAPXPLVXPX---PRGXXPPAXSXXXP 470
G P R G T P P P P +P P P P G PP + P
Sbjct: 268 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP 327
Query: 471 XX*PLPVPPPPXXGXXEXXVXXPVAFSP 554
PPPP + P SP
Sbjct: 328 PPAGTGSPPPPPRQKRQAPERSPPTGSP 355
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.5 bits (68), Expect = 0.69
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = -2
Query: 502 GGGGTGSG*XXGXXXEXAGGXXPRGXGXTRGXGAXXAXQXGXXXGGTGEG 353
GGGG G G G GG G G G G G GG G G
Sbjct: 135 GGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGGGG 184
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = -2
Query: 502 GGGGTGSG*XXGXXXEXAGGXXPRGXGXTRGXGAXXAXQXGXXXGGTGEG 353
GGGG G G G GG G G G G G GG G G
Sbjct: 137 GGGGCGGG-GGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGGGGG 185
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = -2
Query: 502 GGGGTGSG*XXGXXXEXAGGXXPRGXGXTRGXGAXXAXQXGXXXGGTGEG 353
GGGG G G GG G G G G G GG G G
Sbjct: 44 GGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCG 93
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/54 (35%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = -2
Query: 511 PXXGGG-GTGSG*XXGXXXEXAGGXXPRGXGXTRGXGAXXAXQXGXXXGGTGEG 353
P GGG G G G G GG G G G G G GG G G
Sbjct: 116 PACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGG 169
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = -2
Query: 499 GGGTGSG*XXGXXXEXAGGXXPRGXGXTRGXGAXXAXQXGXXXGGTG 359
GGG G G G GG G G G G G GG G
Sbjct: 130 GGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGG 176
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -2
Query: 502 GGGGTGSG*XXGXXXEXAGGXXPRGXGXTRGXGAXXAXQXGXXXGG 365
GGGG G G G GG G G G G G GG
Sbjct: 143 GGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGGGGGCGG 188
>Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical
protein F47B8.5 protein.
Length = 579
Score = 31.1 bits (67), Expect = 0.91
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +1
Query: 319 SGGGGARXQXXSPPPXPXAXRXXAXPXXPQ-XPLSXPXPEAXXPXP 453
SGGGG + +PP P A A P P+ P P PEA P
Sbjct: 396 SGGGGGGGE-AAPPSSPPADAAPAPPPAPEPVPAPAPAPEAAPVAP 440
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 31.1 bits (67), Expect = 0.91
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +3
Query: 360 PVPPXXXPXCXAXXAPXPLVXPXPRGXXPPAXSXXXPXX*PLPVPPPPXXG 512
P PP P AP P P PP P P PPPP G
Sbjct: 609 PPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSG 659
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 31.1 bits (67), Expect = 0.91
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +3
Query: 360 PVPPXXXPXCXAXXAPXPLVXPXPRGXXPPAXSXXXPXX*PLPVPPPPXXG 512
P PP P AP P P PP P P PPPP G
Sbjct: 435 PPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSG 485
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.1 bits (67), Expect = 0.91
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +3
Query: 354 PSPVPPXXXPXCXAXXAPXPLVXPXPRGXXPPAXSXXXPXX*PLPVPPPPXXG 512
P P PP P P P P P P P P PPPP G
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 29.5 bits (63), Expect = 2.8
Identities = 21/70 (30%), Positives = 22/70 (31%)
Frame = +3
Query: 303 GDEAPERRGWXAXXTXFPSPVPPXXXPXCXAXXAPXPLVXPXPRGXXPPAXSXXXPXX*P 482
G P G T P P PP + P P P P G PP P
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP---PPPPGGCPPPPPPPPPGGFK 781
Query: 483 LPVPPPPXXG 512
PPPP G
Sbjct: 782 GGPPPPPPPG 791
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.1 bits (67), Expect = 0.91
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +3
Query: 354 PSPVPPXXXPXCXAXXAPXPLVXPXPRGXXPPAXSXXXPXX*PLPVPPPPXXG 512
P P PP P P P P P P P P PPPP G
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 29.5 bits (63), Expect = 2.8
Identities = 21/70 (30%), Positives = 22/70 (31%)
Frame = +3
Query: 303 GDEAPERRGWXAXXTXFPSPVPPXXXPXCXAXXAPXPLVXPXPRGXXPPAXSXXXPXX*P 482
G P G T P P PP + P P P P G PP P
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP---PPPPGGCPPPPPPPPPGGFK 781
Query: 483 LPVPPPPXXG 512
PPPP G
Sbjct: 782 GGPPPPPPPG 791
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.1 bits (67), Expect = 0.91
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +3
Query: 354 PSPVPPXXXPXCXAXXAPXPLVXPXPRGXXPPAXSXXXPXX*PLPVPPPPXXG 512
P P PP P P P P P P P P PPPP G
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 362
Score = 29.5 bits (63), Expect = 2.8
Identities = 21/70 (30%), Positives = 22/70 (31%)
Frame = +3
Query: 303 GDEAPERRGWXAXXTXFPSPVPPXXXPXCXAXXAPXPLVXPXPRGXXPPAXSXXXPXX*P 482
G P G T P P PP + P P P P G PP P
Sbjct: 308 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP---PPPPGGCPPPPPPPPPGGFK 364
Query: 483 LPVPPPPXXG 512
PPPP G
Sbjct: 365 GGPPPPPPPG 374
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/76 (28%), Positives = 24/76 (31%)
Frame = +1
Query: 358 PPXPXAXRXXAXPXXPQXPLSXPXPEAXXPXPXPXXNXXXNRXXXLLPPXXXXXRXPXXX 537
PP P A P P P P P P P P N PP P
Sbjct: 27 PPCPEPMPVCATPPCP--PQYAPLPPPPMPAPAPAYNPYPCAN----PPCIVVEPMPVAP 80
Query: 538 PLPSPXRSXCPXAAXP 585
P P+P + P A P
Sbjct: 81 PAPAPAYNPYPCATPP 96
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/52 (30%), Positives = 20/52 (38%), Gaps = 3/52 (5%)
Frame = +3
Query: 354 PSPVPPXXXPXCXAXXA---PXPLVXPXPRGXXPPAXSXXXPXX*PLPVPPP 500
P P+P P C A P P+ P P P + P+PV PP
Sbjct: 30 PEPMPVCATPPCPPQYAPLPPPPMPAPAPAYNPYPCANPPCIVVEPMPVAPP 81
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 30.3 bits (65), Expect = 1.6
Identities = 24/70 (34%), Positives = 25/70 (35%)
Frame = -2
Query: 502 GGGGTGSG*XXGXXXEXAGGXXPRGXGXTRGXGAXXAXQXGXXXGGTGEGXXVXSAXHPR 323
GGGG G G G GG G G G G G GG G G A
Sbjct: 86 GGGGCGGGGCGG-----GGGGCGGGGGCGGGGGGGCGGGGGGGCGGGGGGGGGGYASGGS 140
Query: 322 RSGASSPTSL 293
AS+P SL
Sbjct: 141 GGFASAPVSL 150
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = -2
Query: 496 GGTGSG*XXGXXXEXAGGXXPRGXGXTRGXGAXXAXQXGXXXGGTGEG 353
GG G G G + GG +G G G G Q G G G G
Sbjct: 242 GGPGGGGQGGYGGDYGGGWGQQGGGGQGGWGGPQQQQGGGGWGQQGGG 289
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = -2
Query: 496 GGTGSG*XXGXXXEXAGGXXPRGXGXTRGXGAXXAXQXGXXXGGTGEG 353
GG G G G + GG +G G G G Q G G G G
Sbjct: 204 GGPGGGGQGGYGGDYGGGWGQQGGGGQGGWGGPQQQQGGGGWGQQGGG 251
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = -2
Query: 496 GGTGSG*XXGXXXEXAGGXXPRGXGXTRGXGAXXAXQXGXXXGGTGEG 353
GG G G G + GG +G G G G Q G G G G
Sbjct: 242 GGPGGGGQGGYGGDYGGGWGQQGGGGQGGWGGPQQQQGGGGWGQQGGG 289
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/62 (30%), Positives = 20/62 (32%), Gaps = 1/62 (1%)
Frame = +3
Query: 321 RRGWXAXXTXFPSPVPPXXXPXCXAXXAPX-PLVXPXPRGXXPPAXSXXXPXX*PLPVPP 497
R G T P P P P P P P PP P P+P PP
Sbjct: 24 RGGCGGCPTPMCQPRMPCAAPMPMPMPMPVCPPPPPCPAQFCPPPPICPPPPPPPMPCPP 83
Query: 498 PP 503
PP
Sbjct: 84 PP 85
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/53 (33%), Positives = 19/53 (35%)
Frame = +3
Query: 345 TXFPSPVPPXXXPXCXAXXAPXPLVXPXPRGXXPPAXSXXXPXX*PLPVPPPP 503
T P+P PP P P P P PP P P VPPPP
Sbjct: 462 TPKPAPPPPSRIPN------PSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPP 508
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = +3
Query: 354 PSPVPPXXXPXCXAXXAPXPLVXPXPRGXXPPAXSXXXPXX*PLPVPPPP 503
P P PP +P P PP P P P PPPP
Sbjct: 463 PKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPP 512
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = -2
Query: 502 GGGGTGSG*XXGXXXEXAGGXXPRGXGXTRGXGAXXAXQXGXXXGGTGEG 353
GGGG G G GG G G G G G GG G G
Sbjct: 62 GGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCG 111
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -2
Query: 511 PXXGGGGTGSG*XXGXXXEXAGGXXPRGXGXTRGXGAXXAXQXGXXXGGTGEG 353
P GG G G G G GG G G G G G GG G G
Sbjct: 78 PCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGG 130
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = -2
Query: 502 GGGGTGSG*XXGXXXEXAGGXXPRGXGXTRGXGAXXAXQXGXXXGGTGEG 353
GGGG G G G GG G G G G G GG G G
Sbjct: 91 GGGGGGCG--GGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGG 138
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = -2
Query: 502 GGGGTGSG*XXGXXXEXAGGXXPRGXGXTRGXGAXXAXQXGXXXGGTGEG 353
GGGG G G G GG G G G G GG G G
Sbjct: 93 GGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGG 142
Score = 27.9 bits (59), Expect = 8.5
Identities = 19/63 (30%), Positives = 21/63 (33%)
Frame = -2
Query: 502 GGGGTGSG*XXGXXXEXAGGXXPRGXGXTRGXGAXXAXQXGXXXGGTGEGXXVXSAXHPR 323
GGG +G G GG G G + G G A G GG G A P
Sbjct: 148 GGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPS 207
Query: 322 RSG 314
G
Sbjct: 208 GGG 210
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = -2
Query: 502 GGGGTGSG*XXGXXXEXAGGXXPRGXGXTRGXGAXXAXQXGXXXGGTGEG 353
GGGG G G GG G G G G G GG G G
Sbjct: 62 GGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCG 111
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -2
Query: 511 PXXGGGGTGSG*XXGXXXEXAGGXXPRGXGXTRGXGAXXAXQXGXXXGGTGEG 353
P GG G G G G GG G G G G G GG G G
Sbjct: 78 PCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGG 130
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = -2
Query: 502 GGGGTGSG*XXGXXXEXAGGXXPRGXGXTRGXGAXXAXQXGXXXGGTGEG 353
GGGG G G G GG G G G G G GG G G
Sbjct: 91 GGGGGGCG--GGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGG 138
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = -2
Query: 502 GGGGTGSG*XXGXXXEXAGGXXPRGXGXTRGXGAXXAXQXGXXXGGTGEG 353
GGGG G G G GG G G G G GG G G
Sbjct: 93 GGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGG 142
Score = 27.9 bits (59), Expect = 8.5
Identities = 19/63 (30%), Positives = 21/63 (33%)
Frame = -2
Query: 502 GGGGTGSG*XXGXXXEXAGGXXPRGXGXTRGXGAXXAXQXGXXXGGTGEGXXVXSAXHPR 323
GGG +G G GG G G + G G A G GG G A P
Sbjct: 148 GGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPS 207
Query: 322 RSG 314
G
Sbjct: 208 GGG 210
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.5 bits (63), Expect = 2.8
Identities = 24/110 (21%), Positives = 31/110 (28%), Gaps = 1/110 (0%)
Frame = +1
Query: 226 PHAPHHALCSHDHSGSGVRSQVLERLEMRLRSGGGGARXQXXSPPPXPXAXRXXAXPXXP 405
P PHH H ++ G E ++ G PPP + P P
Sbjct: 83 PAHPHHLQHPHPYAYPGYPVPGQEGHQVPAPQHGDHEASPPPPPPPRKSRAGGSSPPPPP 142
Query: 406 QXPLSX-PXPEAXXPXPXPXXNXXXNRXXXLLPPXXXXXRXPXXXPLPSP 552
+ P P + P P R PP P P P P
Sbjct: 143 PPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIP 192
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/58 (31%), Positives = 23/58 (39%), Gaps = 8/58 (13%)
Frame = +3
Query: 354 PSPVPPXXXPXCXAXXAPXP----LVXPXPRGXXP---PAXSXXXPXX*P-LPVPPPP 503
P P PP P +P P + P P+ P P+ P P P+PPPP
Sbjct: 138 PPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPP 195
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/53 (33%), Positives = 19/53 (35%)
Frame = +3
Query: 345 TXFPSPVPPXXXPXCXAXXAPXPLVXPXPRGXXPPAXSXXXPXX*PLPVPPPP 503
T P+P PP P P P P PP P P VPPPP
Sbjct: 469 TPKPAPPPPSRIPN------PSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPP 515
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = +3
Query: 354 PSPVPPXXXPXCXAXXAPXPLVXPXPRGXXPPAXSXXXPXX*PLPVPPPP 503
P P PP +P P PP P P P PPPP
Sbjct: 470 PKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPP 519
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/54 (29%), Positives = 20/54 (37%), Gaps = 1/54 (1%)
Frame = +3
Query: 354 PSPVPPXXXPXCXAXXAPXPL-VXPXPRGXXPPAXSXXXPXX*PLPVPPPPXXG 512
P PV P P +P P+ P+ PP+ P P P PP G
Sbjct: 195 PGPVDPSDEPSPSGPPSPGPVDPSEDPKPSEPPSPGPVDPSDEPSPSDPPGPPG 248
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = -2
Query: 502 GGGGTGSG*XXGXXXEXAGGXXPRGXGXTRGXGA-XXAXQXGXXXGGTGEG 353
GGGG G G G GG G G G G G GG G+G
Sbjct: 171 GGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGGGGMGGGGYGGGGDG 221
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 28.3 bits (60), Expect = 6.4
Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Frame = -2
Query: 502 GGGGTGSG*XXGXXXEXAGGXXPRGXGXTRGXGA-XXAXQXGXXXGGTGEG 353
GGG S AGG P G RG GA A + G GG G G
Sbjct: 506 GGGHVASAGGGISAMTGAGGEAPGGGAGGRGGGAHGGAGRGGGYQGGRGGG 556
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 28.3 bits (60), Expect = 6.4
Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Frame = -2
Query: 502 GGGGTGSG*XXGXXXEXAGGXXPRGXGXTRGXGA-XXAXQXGXXXGGTGEG 353
GGG S AGG P G RG GA A + G GG G G
Sbjct: 506 GGGHVASAGGGISAMTGAGGEAPGGGAGGRGGGAHGGAGRGGGYQGGRGGG 556
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = -2
Query: 499 GGGTGSG*XXGXXXEXAGGXXPRGXGXTRGXGAXXAXQXGXXXGGTGEG 353
GGG G G GG G G G G A G GG G G
Sbjct: 81 GGGHGGAAVGGGYGGAVGGGGGGGYGGGHGGGHGGAVGGGYGGGGGGGG 129
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +3
Query: 369 PXXXPXCXAXXAPXPLVXPXPRGXXPPAXSXXXPXX*PLPVPPPP 503
P P C P PL P PPA P P P PPP
Sbjct: 74 PRPSPSCCPYVPPAPLPPP-----PPPASPCCGPSPVPAPCCPPP 113
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 27.9 bits (59), Expect = 8.5
Identities = 20/66 (30%), Positives = 22/66 (33%)
Frame = +3
Query: 357 SPVPPXXXPXCXAXXAPXPLVXPXPRGXXPPAXSXXXPXX*PLPVPPPPXXGXXEXXVXX 536
+P PP P A P P P P A + P PPPP
Sbjct: 535 APTPPPPPPVGMANGGPPP-PPPLPLDLLKGAVAGLKSVPGGPPPPPPPPPPSFMFNGKV 593
Query: 537 PVAFSP 554
P AFSP
Sbjct: 594 PNAFSP 599
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 27.9 bits (59), Expect = 8.5
Identities = 24/79 (30%), Positives = 26/79 (32%)
Frame = -1
Query: 587 AGXAAXGXXXRXGEGNGXXNGXLXXXXXGGRRXXXRLXXXXXXGXGXGXXASGXGXDKGX 408
AG +A G G G G G GGR G G A G G G
Sbjct: 45 AGASAGGTGGGRGGGRGGSGGGRGGGSGGGR------------GGSGGAGAGGSGSGSGG 92
Query: 407 WGXXGXAXWRXAXGXGGGE 351
WG G A G GG +
Sbjct: 93 WG--GQDGGSSAGGWGGSQ 109
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = -2
Query: 502 GGGGTGSG*XXGXXXEXAGGXXPRGXGXTRGXGAXXAXQXGXXXGGTGEG 353
GGGG G G G GG G G G+ G GG G
Sbjct: 58 GGGGGGGGFGGGNGGFGGGGGGSGGGGGGNNIGSLVGSLIGGGGGGGNYG 107
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,908,459
Number of Sequences: 27780
Number of extensions: 152654
Number of successful extensions: 1189
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 911
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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