Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_J14
         (757 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.     33   1.1  
BC026155-1|AAH26155.1|  411|Homo sapiens RSBN1 protein protein.        31   5.9  
AL365321-6|CAH72507.1|  754|Homo sapiens round spermatid basic p...    31   5.9  
AL137856-1|CAI19067.1|  754|Homo sapiens round spermatid basic p...    31   5.9  
AK002082-1|BAA92075.1|  754|Homo sapiens protein ( Homo sapiens ...    31   5.9  

>AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.
          Length = 1134

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 21/64 (32%), Positives = 21/64 (32%)
 Frame = +2

Query: 452  PRXRXXPXXXTXPXPPXSXLESXXXPXDPXXLPPPXLPTXXXVRPAPXLXXXXGXXPXXX 631
            PR    P     P PP         P  P  LPPP LP      P P L       P   
Sbjct: 943  PRAPALPSEARAPPPPPPP--PPHPPLPPPPLPPPPLPLRLPPLPPPPLPRPHPPPPPPL 1000

Query: 632  PXLL 643
            P LL
Sbjct: 1001 PPLL 1004


>BC026155-1|AAH26155.1|  411|Homo sapiens RSBN1 protein protein.
          Length = 411

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 14/46 (30%), Positives = 18/46 (39%)
 Frame = +2

Query: 452 PRXRXXPXXXTXPXPPXSXLESXXXPXDPXXLPPPXLPTXXXVRPA 589
           P  R        P PP +   +   P +P  LPPP  P+     PA
Sbjct: 64  PHRRRRSRQHPGPLPPTNAAPTVPGPVEPLLLPPPPPPSLAPAGPA 109


>AL365321-6|CAH72507.1|  754|Homo sapiens round spermatid basic
           protein 1 protein.
          Length = 754

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 14/46 (30%), Positives = 18/46 (39%)
 Frame = +2

Query: 452 PRXRXXPXXXTXPXPPXSXLESXXXPXDPXXLPPPXLPTXXXVRPA 589
           P  R        P PP +   +   P +P  LPPP  P+     PA
Sbjct: 64  PHRRRRSRQHPGPLPPTNAAPTVPGPVEPLLLPPPPPPSLAPAGPA 109


>AL137856-1|CAI19067.1|  754|Homo sapiens round spermatid basic
           protein 1 protein.
          Length = 754

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 14/46 (30%), Positives = 18/46 (39%)
 Frame = +2

Query: 452 PRXRXXPXXXTXPXPPXSXLESXXXPXDPXXLPPPXLPTXXXVRPA 589
           P  R        P PP +   +   P +P  LPPP  P+     PA
Sbjct: 64  PHRRRRSRQHPGPLPPTNAAPTVPGPVEPLLLPPPPPPSLAPAGPA 109


>AK002082-1|BAA92075.1|  754|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11220 fis, clone PLACE1008129. ).
          Length = 754

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 14/46 (30%), Positives = 18/46 (39%)
 Frame = +2

Query: 452 PRXRXXPXXXTXPXPPXSXLESXXXPXDPXXLPPPXLPTXXXVRPA 589
           P  R        P PP +   +   P +P  LPPP  P+     PA
Sbjct: 64  PHRRRRSRRHPGPLPPTNAAPTVPGPVEPLLLPPPPPPSLAPAGPA 109


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,298,820
Number of Sequences: 237096
Number of extensions: 935836
Number of successful extensions: 2900
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2797
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)