Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_J10
(761 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000196-2|AAC24253.1| 345|Caenorhabditis elegans Ribosomal pro... 128 4e-30
Z69661-4|CAA93491.1| 238|Caenorhabditis elegans Hypothetical pr... 35 0.055
Z68298-10|CAA92607.1| 1034|Caenorhabditis elegans Hypothetical p... 30 2.1
Z35598-1|CAA84656.1| 1343|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z92773-4|CAB07130.2| 584|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z81114-8|CAB97236.1| 584|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical pr... 28 6.3
AF098995-5|AAC67482.1| 477|Caenorhabditis elegans Hypothetical ... 28 6.3
>AF000196-2|AAC24253.1| 345|Caenorhabditis elegans Ribosomal
protein, large subunitprotein 4 protein.
Length = 345
Score = 128 bits (309), Expect = 4e-30
Identities = 73/184 (39%), Positives = 107/184 (58%), Gaps = 2/184 (1%)
Frame = -3
Query: 747 RGHIIEKIPRTSPGCS-RQSSRRSTRPNRLSFS*GASRXXSDILKVYKSQRLRAGKGKMR 571
RGH+I+++ S + S R T+ + S +DI KVY S+R RAGKGK+R
Sbjct: 139 RGHVIDQVAEVPLVVSDKVESFRKTKEAVVFLR--RSHLWADIEKVYNSKRNRAGKGKLR 196
Query: 570 NRRRIQRKGPLIIFNQGFRV*LAPSATFPGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSA 391
NR+ Q+ GP++I+ Q A PGV+ LAPGGHLGR +IWT+SA
Sbjct: 197 NRQHKQKLGPVVIYGQDAECARA-FRNIPGVDVMNVERLNLLKLAPGGHLGRLIIWTESA 255
Query: 390 FGRLDPLFGSWKTPSKQ-KKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRK 214
F +LD ++G+ S Q KK +++P P MAN+D +R+++S+E+ K +RAP K +
Sbjct: 256 FKKLDTIYGTTVANSSQLKKGWSVPLPIMANSDFSRIIRSEEVVKAIRAPKKNPVLPKVH 315
Query: 213 LNPL 202
NPL
Sbjct: 316 RNPL 319
>Z69661-4|CAA93491.1| 238|Caenorhabditis elegans Hypothetical
protein F48F7.6 protein.
Length = 238
Score = 35.1 bits (77), Expect = 0.055
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = -3
Query: 345 KQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRA--PNKRVIRATRKLNPLTNXQGHAETQ 172
K+ KN LPQ K + L L+ + I ++ A NK++I + N + H E +
Sbjct: 36 KKTKNMTLPQKKAESAFLMICLQRNTIELMVTALLANKKIIDSKGNCAFCRNKKQHEEEK 95
Query: 171 SLRGRAEEESYLRAAQKEELE 109
GR + + +L K+EL+
Sbjct: 96 WCAGRTKLQLFLHRIDKDELK 116
>Z68298-10|CAA92607.1| 1034|Caenorhabditis elegans Hypothetical
protein F44D12.1 protein.
Length = 1034
Score = 29.9 bits (64), Expect = 2.1
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = -1
Query: 419 DVSSSGLSPHSAGLTPYSG---HGRHHRNKRRTSTCPSQRWPTLTSHVFSSLMRSGRSSV 249
+ ++S P+S TP S G+ HR S +PT+ SS+M S S
Sbjct: 532 NTTTSDARPYSMHFTPTSSTIMEGKPHRRSAVYSPSHPPVYPTIRDDSMSSVMSSSNSIR 591
Query: 248 LPTNA*SVLHAN 213
LP+ + S + N
Sbjct: 592 LPSTSFSNQYPN 603
>Z35598-1|CAA84656.1| 1343|Caenorhabditis elegans Hypothetical
protein F10F2.2 protein.
Length = 1343
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = -3
Query: 282 LKSDEIRKVLRAPNKRVIRATRKLNPLTNXQGHAETQSLRGRAEEESYLRAAQKEELEGP 103
+ DE+RK AP+++V++ + + G A + S++G E + A Q+ + E
Sbjct: 425 IDKDEVRKEPCAPHQKVVKIGGPVYRIGVGGGAASSVSVQGNRENQLDFAAVQRGDAEMG 484
Query: 102 G 100
G
Sbjct: 485 G 485
>Z92773-4|CAB07130.2| 584|Caenorhabditis elegans Hypothetical
protein W08E3.2 protein.
Length = 584
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/85 (18%), Positives = 38/85 (44%), Gaps = 3/85 (3%)
Frame = -3
Query: 354 TPSKQKKNFNLPQPKMA---NTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNXQGH 184
TP + + + P P+ ++D ++ + + R+V +V ++ P+ +
Sbjct: 167 TPIQDGEEIDAPAPESTEEESSDARQVSRQQKDRRVSSTTRGKVGKSGTSRRPMKQRERE 226
Query: 183 AETQSLRGRAEEESYLRAAQKEELE 109
+G EE+ +R AQK +++
Sbjct: 227 DTVDESKGEEEEDQGVRPAQKRQVK 251
>Z81114-8|CAB97236.1| 584|Caenorhabditis elegans Hypothetical
protein W08E3.2 protein.
Length = 584
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/85 (18%), Positives = 38/85 (44%), Gaps = 3/85 (3%)
Frame = -3
Query: 354 TPSKQKKNFNLPQPKMA---NTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNXQGH 184
TP + + + P P+ ++D ++ + + R+V +V ++ P+ +
Sbjct: 167 TPIQDGEEIDAPAPESTEEESSDARQVSRQQKDRRVSSTTRGKVGKSGTSRRPMKQRERE 226
Query: 183 AETQSLRGRAEEESYLRAAQKEELE 109
+G EE+ +R AQK +++
Sbjct: 227 DTVDESKGEEEEDQGVRPAQKRQVK 251
>Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical protein
F54B3.1b protein.
Length = 3394
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/64 (23%), Positives = 26/64 (40%)
Frame = -3
Query: 420 GRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPN 241
G F+ T G F +TP + +N P+ A +++ +IR +L P
Sbjct: 2789 GEFLKKTDLKLGLASTKFHEIRTPFFLRSEWNKDAPRRAGKLFDEVVRESDIRSILEEPL 2848
Query: 240 KRVI 229
K +
Sbjct: 2849 KEFV 2852
>Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical protein
F54B3.1a protein.
Length = 3396
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/64 (23%), Positives = 26/64 (40%)
Frame = -3
Query: 420 GRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPN 241
G F+ T G F +TP + +N P+ A +++ +IR +L P
Sbjct: 2789 GEFLKKTDLKLGLASTKFHEIRTPFFLRSEWNKDAPRRAGKLFDEVVRESDIRSILEEPL 2848
Query: 240 KRVI 229
K +
Sbjct: 2849 KEFV 2852
>AF098995-5|AAC67482.1| 477|Caenorhabditis elegans Hypothetical
protein F58E1.4 protein.
Length = 477
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +1
Query: 454 QLVNIQELHTGECCGRRESDPESLVEDYEGXLTLDTTTVAHFTLTSTKTL 603
Q V + LH C G +E E+L+E YE TTT+ TL S T+
Sbjct: 304 QNVYFKNLHATYCEGEKEQFVETLLEKYEICWLTTTTTLK--TLKSNCTV 351
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,010,165
Number of Sequences: 27780
Number of extensions: 296749
Number of successful extensions: 780
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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