Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_J09
(772 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 32 0.52
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 1.6
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 2.8
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 2.8
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 2.8
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 6.4
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 6.4
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 6.4
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 28 8.5
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 28 8.5
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 28 8.5
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 28 8.5
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 31.9 bits (69), Expect = 0.52
Identities = 25/89 (28%), Positives = 27/89 (30%), Gaps = 6/89 (6%)
Frame = +3
Query: 417 PPPPLPXXX------SXPXXVGAXXXXRSPXSPLXXXPXXXXXXXPLXPPXPXPXXXXPX 578
PPPP P + P +P PL P P PP P P P
Sbjct: 51 PPPPAPYPQQAVPAPAPPPAPYPQHAVPAPAPPLASYPQNAVPV-PAPPPAPYPQHAVPA 109
Query: 579 XXXPPXAPXPXXXXXXPXSXXTXXRXPPP 665
PP AP P P PPP
Sbjct: 110 PAPPP-APYPQHAVPAPAPYQQQPPPPPP 137
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/83 (27%), Positives = 25/83 (30%)
Frame = -1
Query: 664 GGGXRXXVXXDXGXXXXXXGXGAXGGXXXXGXXXXGXGXGGXXGXXXXXXLGXXXRGXWG 485
GGG G G G+ GG G G GG G G G G
Sbjct: 121 GGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGG 180
Query: 484 DLXXXXAPTXXGXXXXXGXGGGG 416
AP+ G G GGG
Sbjct: 181 ---YAVAPSGGGGCGGGGSSGGG 200
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/83 (27%), Positives = 25/83 (30%)
Frame = -1
Query: 664 GGGXRXXVXXDXGXXXXXXGXGAXGGXXXXGXXXXGXGXGGXXGXXXXXXLGXXXRGXWG 485
GGG G G G+ GG G G GG G G G G
Sbjct: 121 GGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGG 180
Query: 484 DLXXXXAPTXXGXXXXXGXGGGG 416
AP+ G G GGG
Sbjct: 181 ---YAVAPSGGGGCGGGGSSGGG 200
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = +2
Query: 431 PXXXXXPXPXRSXXXPEITPXPPXXXPEXAXXXXXXRPXXPXXPXXXXXXXPXPPRP 601
P P P P IT PP P P P P P PP P
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/82 (25%), Positives = 22/82 (26%)
Frame = +3
Query: 420 PPPLPXXXSXPXXVGAXXXXRSPXSPLXXXPXXXXXXXPLXPPXPXPXXXXPXXXXPPXA 599
PPP S P P + P PP P P P PP
Sbjct: 686 PPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPP-- 743
Query: 600 PXPXXXXXXPXSXXTXXRXPPP 665
P P P S PPP
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPP 765
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = +2
Query: 431 PXXXXXPXPXRSXXXPEITPXPPXXXPEXAXXXXXXRPXXPXXPXXXXXXXPXPPRP 601
P P P P IT PP P P P P P PP P
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/82 (25%), Positives = 22/82 (26%)
Frame = +3
Query: 420 PPPLPXXXSXPXXVGAXXXXRSPXSPLXXXPXXXXXXXPLXPPXPXPXXXXPXXXXPPXA 599
PPP S P P + P PP P P P PP
Sbjct: 686 PPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPP-- 743
Query: 600 PXPXXXXXXPXSXXTXXRXPPP 665
P P P S PPP
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPP 765
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = +2
Query: 431 PXXXXXPXPXRSXXXPEITPXPPXXXPEXAXXXXXXRPXXPXXPXXXXXXXPXPPRP 601
P P P P IT PP P P P P P PP P
Sbjct: 304 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 360
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/82 (25%), Positives = 22/82 (26%)
Frame = +3
Query: 420 PPPLPXXXSXPXXVGAXXXXRSPXSPLXXXPXXXXXXXPLXPPXPXPXXXXPXXXXPPXA 599
PPP S P P + P PP P P P PP
Sbjct: 269 PPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPP-- 326
Query: 600 PXPXXXXXXPXSXXTXXRXPPP 665
P P P S PPP
Sbjct: 327 PPPPPGGLPPISGGPPPPPPPP 348
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/85 (24%), Positives = 24/85 (28%)
Frame = +3
Query: 417 PPPPLPXXXSXPXXVGAXXXXRSPXSPLXXXPXXXXXXXPLXPPXPXPXXXXPXXXXPPX 596
PPPP P S P G+ P P P P PP P PP
Sbjct: 237 PPPPPPPKGSPPL-AGSGSP---PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
Query: 597 APXPXXXXXXPXSXXTXXRXPPPRS 671
P PPP++
Sbjct: 293 RAGSPPPPPPPRGSPPTGSLPPPQA 317
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/85 (24%), Positives = 24/85 (28%)
Frame = +3
Query: 417 PPPPLPXXXSXPXXVGAXXXXRSPXSPLXXXPXXXXXXXPLXPPXPXPXXXXPXXXXPPX 596
PPPP P S P G+ P P P P PP P PP
Sbjct: 258 PPPPPPPKGSPPL-AGSGSP---PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
Query: 597 APXPXXXXXXPXSXXTXXRXPPPRS 671
P PPP++
Sbjct: 314 RAGSPPPPPPPRGSPPTGSLPPPQA 338
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/85 (24%), Positives = 24/85 (28%)
Frame = +3
Query: 417 PPPPLPXXXSXPXXVGAXXXXRSPXSPLXXXPXXXXXXXPLXPPXPXPXXXXPXXXXPPX 596
PPPP P S P G+ P P P P PP P PP
Sbjct: 243 PPPPPPPKGSPPL-AGSGSP---PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
Query: 597 APXPXXXXXXPXSXXTXXRXPPPRS 671
P PPP++
Sbjct: 299 RAGSPPPPPPPRGSPPTGSLPPPQA 323
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 27.9 bits (59), Expect = 8.5
Identities = 22/85 (25%), Positives = 24/85 (28%), Gaps = 2/85 (2%)
Frame = +3
Query: 417 PPPPLPXXXSXPXXVGAXXXXRSPXSPLXXXPXXXXXXXPLXPPXPXP--XXXXPXXXXP 590
PPPP P + G P +P P P PP P P P
Sbjct: 574 PPPPPPSSGTR----GIAPSRPLPQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAA 629
Query: 591 PXAPXPXXXXXXPXSXXTXXRXPPP 665
P P P P PPP
Sbjct: 630 PPPPPPPPPMGLPAVGAGAPPPPPP 654
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 27.9 bits (59), Expect = 8.5
Identities = 22/85 (25%), Positives = 24/85 (28%), Gaps = 2/85 (2%)
Frame = +3
Query: 417 PPPPLPXXXSXPXXVGAXXXXRSPXSPLXXXPXXXXXXXPLXPPXPXP--XXXXPXXXXP 590
PPPP P + G P +P P P PP P P P
Sbjct: 400 PPPPPPSSGTR----GIAPSRPLPQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAA 455
Query: 591 PXAPXPXXXXXXPXSXXTXXRXPPP 665
P P P P PPP
Sbjct: 456 PPPPPPPPPMGLPAVGAGAPPPPPP 480
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 27.9 bits (59), Expect = 8.5
Identities = 20/83 (24%), Positives = 22/83 (26%)
Frame = +3
Query: 417 PPPPLPXXXSXPXXVGAXXXXRSPXSPLXXXPXXXXXXXPLXPPXPXPXXXXPXXXXPPX 596
PPP P P G +P + P P P P P P
Sbjct: 443 PPPSAPPTIKFPISTGPSYSSTTPPTTPKPAPPP-----PSRIPNPSPSPQPAEVSKSPP 497
Query: 597 APXPXXXXXXPXSXXTXXRXPPP 665
P P P S PPP
Sbjct: 498 PPPPLPPIATPSSVPPPPPPPPP 520
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 27.9 bits (59), Expect = 8.5
Identities = 19/64 (29%), Positives = 19/64 (29%), Gaps = 1/64 (1%)
Frame = -1
Query: 607 GXGAXGGXXXXGXXXXGXGXG-GXXGXXXXXXLGXXXRGXWGDLXXXXAPTXXGXXXXXG 431
G G GG G G G G G G G RG WG G G
Sbjct: 64 GGGDWGGNNGGGGNWGGNGGGRGDWGGNGGGGRGGGGRGDWGGNNNGGGGNWGGGGNNDG 123
Query: 430 XGGG 419
GG
Sbjct: 124 GWGG 127
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,698,944
Number of Sequences: 27780
Number of extensions: 105709
Number of successful extensions: 439
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 396
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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