Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_J04
(746 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 36 0.023
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 36 0.023
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 36 0.030
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 36 0.030
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 32 0.38
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.38
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.38
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.38
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.38
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.38
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.38
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 32 0.50
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 0.87
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.1
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 31 1.1
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 31 1.1
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 31 1.1
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 3.5
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 29 3.5
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/... 25 3.8
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/... 25 3.8
Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical pr... 29 4.6
X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein. 29 4.6
X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein. 29 4.6
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 4.6
AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen prot... 29 4.6
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 4.6
Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical p... 28 6.1
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical pr... 24 6.8
AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAue... 24 6.8
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 28 8.1
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 36.3 bits (80), Expect = 0.023
Identities = 23/65 (35%), Positives = 25/65 (38%)
Frame = -2
Query: 289 PPPPPPXVXFXXXXXGXGGPPXKFPPXPXPXCXRPXGLGXFYXLXPXPXNPSLXXGKDPK 110
PPPPPP G G P PP P P P G+G P P G P
Sbjct: 297 PPPPPPP---PGRTPGPPGMPG-MPPPPPPSRFGPPGMGGM--PPPPPPGMRYPGGMPPP 350
Query: 109 PXPRW 95
P PR+
Sbjct: 351 PPPRY 355
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 36.3 bits (80), Expect = 0.023
Identities = 23/65 (35%), Positives = 25/65 (38%)
Frame = -2
Query: 289 PPPPPPXVXFXXXXXGXGGPPXKFPPXPXPXCXRPXGLGXFYXLXPXPXNPSLXXGKDPK 110
PPPPPP G G P PP P P P G+G P P G P
Sbjct: 307 PPPPPPP---PGRTPGPPGMPG-MPPPPPPSRFGPPGMGGM--PPPPPPGMRYPGGMPPP 360
Query: 109 PXPRW 95
P PR+
Sbjct: 361 PPPRY 365
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 35.9 bits (79), Expect = 0.030
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -2
Query: 307 PLXXXSPPPPPPXVXFXXXXXGXGGPPXKFPPXP 206
P+ +PPPPPP G G PP PP P
Sbjct: 624 PISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPP 657
Score = 32.7 bits (71), Expect = 0.28
Identities = 19/52 (36%), Positives = 20/52 (38%)
Frame = -2
Query: 289 PPPPPPXVXFXXXXXGXGGPPXKFPPXPXPXCXRPXGLGXFYXLXPXPXNPS 134
PPPPPP F PP PP P P P +G P P PS
Sbjct: 611 PPPPPPPQSFGMAPISSAAPP---PPPPPPPMGLP-AVGAGAPPPPPPPPPS 658
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 35.9 bits (79), Expect = 0.030
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -2
Query: 307 PLXXXSPPPPPPXVXFXXXXXGXGGPPXKFPPXP 206
P+ +PPPPPP G G PP PP P
Sbjct: 450 PISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPP 483
Score = 32.7 bits (71), Expect = 0.28
Identities = 19/52 (36%), Positives = 20/52 (38%)
Frame = -2
Query: 289 PPPPPPXVXFXXXXXGXGGPPXKFPPXPXPXCXRPXGLGXFYXLXPXPXNPS 134
PPPPPP F PP PP P P P +G P P PS
Sbjct: 437 PPPPPPPQSFGMAPISSAAPP---PPPPPPPMGLP-AVGAGAPPPPPPPPPS 484
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 32.3 bits (70), Expect = 0.38
Identities = 17/69 (24%), Positives = 21/69 (30%)
Frame = +2
Query: 203 GXXGGKFXGGAPXPXXXVGKXNXXGGGGXAXXXXGXXXPPPPGXXSPPXXXXXKNKXXSX 382
G G + G P + GGGG G PPPP P + +
Sbjct: 60 GFGGNNYNNGPPPFDGGYNRPYGGGGGGGYGRPQGYVPPPPPPPTQPEPEPEPRPEPQPE 119
Query: 383 PXXXXSPXP 409
P P P
Sbjct: 120 PQPEPQPEP 128
Score = 31.9 bits (69), Expect = 0.50
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = +1
Query: 202 GXAXGEIXXGGPPPPXXXXXKXXXGGGGXGXXXXGXXXPPPPXXXFPP 345
G G GPPP + GGGG G PPPP P
Sbjct: 59 GGFGGNNYNNGPPPFDGGYNRPYGGGGGGGYGRPQGYVPPPPPPPTQP 106
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +3
Query: 201 GXGXGGNXXGGPPXPXXXXXKXTXGGGGGG 290
G G GGN P P GGGGGG
Sbjct: 58 GGGFGGNNYNNGPPPFDGGYNRPYGGGGGG 87
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.38
Identities = 19/59 (32%), Positives = 21/59 (35%)
Frame = -2
Query: 307 PLXXXSPPPPPPXVXFXXXXXGXGGPPXKFPPXPXPXCXRPXGLGXFYXLXPXPXNPSL 131
P+ PPPPPP G PP PP P P G F P P P +
Sbjct: 737 PITGGPPPPPPPG---GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGM 792
Score = 28.3 bits (60), Expect = 6.1
Identities = 23/74 (31%), Positives = 23/74 (31%), Gaps = 5/74 (6%)
Frame = -2
Query: 307 PLXXXSPPPPPPXVXFXXXXXGXGGPPXK--FPP---XPXPXCXRPXGLGXFYXLXPXPX 143
P PPPPPP G PP PP P P P G P P
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP----PPPPP 775
Query: 142 NPSLXXGKDPKPXP 101
P G P P P
Sbjct: 776 PPGGFKGGPPPPPP 789
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/49 (34%), Positives = 17/49 (34%), Gaps = 7/49 (14%)
Frame = +1
Query: 220 IXXGGPPPPXXXXXKXXXGG-------GGXGXXXXGXXXPPPPXXXFPP 345
I G PPPP GG GG G PPPP PP
Sbjct: 722 ITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.38
Identities = 19/59 (32%), Positives = 21/59 (35%)
Frame = -2
Query: 307 PLXXXSPPPPPPXVXFXXXXXGXGGPPXKFPPXPXPXCXRPXGLGXFYXLXPXPXNPSL 131
P+ PPPPPP G PP PP P P G F P P P +
Sbjct: 737 PITGGPPPPPPPG---GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGM 792
Score = 28.3 bits (60), Expect = 6.1
Identities = 23/74 (31%), Positives = 23/74 (31%), Gaps = 5/74 (6%)
Frame = -2
Query: 307 PLXXXSPPPPPPXVXFXXXXXGXGGPPXK--FPP---XPXPXCXRPXGLGXFYXLXPXPX 143
P PPPPPP G PP PP P P P G P P
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP----PPPPP 775
Query: 142 NPSLXXGKDPKPXP 101
P G P P P
Sbjct: 776 PPGGFKGGPPPPPP 789
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/49 (34%), Positives = 17/49 (34%), Gaps = 7/49 (14%)
Frame = +1
Query: 220 IXXGGPPPPXXXXXKXXXGG-------GGXGXXXXGXXXPPPPXXXFPP 345
I G PPPP GG GG G PPPP PP
Sbjct: 722 ITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.3 bits (70), Expect = 0.38
Identities = 19/59 (32%), Positives = 21/59 (35%)
Frame = -2
Query: 307 PLXXXSPPPPPPXVXFXXXXXGXGGPPXKFPPXPXPXCXRPXGLGXFYXLXPXPXNPSL 131
P+ PPPPPP G PP PP P P G F P P P +
Sbjct: 320 PITGGPPPPPPPG---GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGM 375
Score = 28.3 bits (60), Expect = 6.1
Identities = 23/74 (31%), Positives = 23/74 (31%), Gaps = 5/74 (6%)
Frame = -2
Query: 307 PLXXXSPPPPPPXVXFXXXXXGXGGPPXK--FPP---XPXPXCXRPXGLGXFYXLXPXPX 143
P PPPPPP G PP PP P P P G P P
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP----PPPPP 358
Query: 142 NPSLXXGKDPKPXP 101
P G P P P
Sbjct: 359 PPGGFKGGPPPPPP 372
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/49 (34%), Positives = 17/49 (34%), Gaps = 7/49 (14%)
Frame = +1
Query: 220 IXXGGPPPPXXXXXKXXXGG-------GGXGXXXXGXXXPPPPXXXFPP 345
I G PPPP GG GG G PPPP PP
Sbjct: 305 ITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 353
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +1
Query: 229 GGPPPPXXXXXKXXXGGGGXGXXXXGXXXPPPPXXXFPP 345
G PPPP GG G PPPP PP
Sbjct: 270 GSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 308
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +1
Query: 229 GGPPPPXXXXXKXXXGGGGXGXXXXGXXXPPPPXXXFPP 345
G PPPP G G PPPP PP
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPP 273
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/46 (32%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
Frame = -3
Query: 345 GGEXXPGGGGXXXPXXXXAXPPPP-XXXFXPTXXXGXGAPPXNFPP 211
G P GG P + PPPP P G+PP PP
Sbjct: 310 GSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPP 355
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +1
Query: 229 GGPPPPXXXXXKXXXGGGGXGXXXXGXXXPPPPXXXFPP 345
G PPPP GG G PPPP PP
Sbjct: 291 GSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 329
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +1
Query: 229 GGPPPPXXXXXKXXXGGGGXGXXXXGXXXPPPPXXXFPP 345
G PPPP G G PPPP PP
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPP 294
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/46 (32%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
Frame = -3
Query: 345 GGEXXPGGGGXXXPXXXXAXPPPP-XXXFXPTXXXGXGAPPXNFPP 211
G P GG P + PPPP P G+PP PP
Sbjct: 331 GSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPP 376
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +1
Query: 229 GGPPPPXXXXXKXXXGGGGXGXXXXGXXXPPPPXXXFPP 345
G PPPP GG G PPPP PP
Sbjct: 276 GSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 314
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +1
Query: 229 GGPPPPXXXXXKXXXGGGGXGXXXXGXXXPPPPXXXFPP 345
G PPPP G G PPPP PP
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPP 279
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/46 (32%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
Frame = -3
Query: 345 GGEXXPGGGGXXXPXXXXAXPPPP-XXXFXPTXXXGXGAPPXNFPP 211
G P GG P + PPPP P G+PP PP
Sbjct: 316 GSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPP 361
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 31.9 bits (69), Expect = 0.50
Identities = 20/69 (28%), Positives = 24/69 (34%)
Frame = +3
Query: 84 GXSFXRGXGXGSFPXFKDGXXGXGXXK*NXPXPXGLXXXGXGXGGNXXGGPPXPXXXXXK 263
G + RG G + + G G N G G G GG GG +
Sbjct: 52 GPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGR 111
Query: 264 XTXGGGGGG 290
GGGGGG
Sbjct: 112 GGGGGGGGG 120
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 31.1 bits (67), Expect = 0.87
Identities = 20/64 (31%), Positives = 23/64 (35%)
Frame = -2
Query: 292 SPPPPPPXVXFXXXXXGXGGPPXKFPPXPXPXCXRPXGLGXFYXLXPXPXNPSLXXGKDP 113
SPPPPPP PP PP P P G+ P +PS+ P
Sbjct: 1337 SPPPPPPPPPPPSDDLTPVPPP---PPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPP 1393
Query: 112 KPXP 101
P P
Sbjct: 1394 PPLP 1397
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/63 (34%), Positives = 22/63 (34%)
Frame = +3
Query: 102 GXGXGSFPXFKDGXXGXGXXK*NXPXPXGLXXXGXGXGGNXXGGPPXPXXXXXKXTXGGG 281
G G G G G G P P G G G GG GG P GGG
Sbjct: 28 GGGGGGCGGGCGGGCGGGGGCAPPPAPCG-GGCGGGGGGCGGGGGCAPPPAPCGGGCGGG 86
Query: 282 GGG 290
GGG
Sbjct: 87 GGG 89
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/48 (31%), Positives = 16/48 (33%)
Frame = +2
Query: 203 GXXGGKFXGGAPXPXXXVGKXNXXGGGGXAXXXXGXXXPPPPGXXSPP 346
G GG GG G GGGG + PPPP P
Sbjct: 267 GGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPPAP 314
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/63 (34%), Positives = 22/63 (34%)
Frame = +3
Query: 102 GXGXGSFPXFKDGXXGXGXXK*NXPXPXGLXXXGXGXGGNXXGGPPXPXXXXXKXTXGGG 281
G G G G G G P P G G G GG GG P GGG
Sbjct: 28 GGGGGGCGGGCGGGCGGGGGCAPPPAPCG-GGCGGGGGGCGGGGGCAPPPAPCGGGCGGG 86
Query: 282 GGG 290
GGG
Sbjct: 87 GGG 89
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/48 (31%), Positives = 16/48 (33%)
Frame = +2
Query: 203 GXXGGKFXGGAPXPXXXVGKXNXXGGGGXAXXXXGXXXPPPPGXXSPP 346
G GG GG G GGGG + PPPP P
Sbjct: 267 GGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPPAP 314
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 396 PPPXXXXXXXXXPXPPGXPXXPPXGXXP 479
PPP P PPG P PP G P
Sbjct: 681 PPPPQGQQYYGGPPPPGQPYGPPGGYPP 708
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 396 PPPXXXXXXXXXPXPPGXPXXPPXGXXP 479
PPP P PPG P PP G P
Sbjct: 681 PPPPQGQQYYGGPPPPGQPYGPPGGYPP 708
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -3
Query: 330 PGGGGXXXPXXXXAXPPPPXXXFXPTXXXGXGAPP 226
P GG A PPPP P G GAPP
Sbjct: 20 PSAGGGGGGCGCGAPPPPPACAPPPAPACGGGAPP 54
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = -2
Query: 292 SPPPPPPXVXFXXXXXGXGGPPXKFPPXPXPXCXRPXG 179
+PPPPP G G PP P P P G
Sbjct: 33 APPPPPACAPPPAPACGGGAPPPPAYAAPAPSYGAPAG 70
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 3/43 (6%)
Frame = -3
Query: 330 PGGGGXXXPXXXXAX---PPPPXXXFXPTXXXGXGAPPXNFPP 211
PG GG P A PPPP P GAPP PP
Sbjct: 78 PGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPP 120
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/60 (31%), Positives = 19/60 (31%), Gaps = 1/60 (1%)
Frame = -2
Query: 286 PPPPPXVXFXXXXXGXGGPPXKFPP-XPXPXCXRPXGLGXFYXLXPXPXNPSLXXGKDPK 110
PPP F GPP FPP P P P G P P P PK
Sbjct: 114 PPPAHHGHFGPPGHHFQGPPQHFPPGPPRPHFPGPPGPHRPPEHYPGPPRPQAPAAPPPK 173
>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
c protein.
Length = 1510
Score = 25.0 bits (52), Expect(2) = 3.8
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -2
Query: 307 PLXXXSPPPPPP 272
P+ SPPPPPP
Sbjct: 301 PIKEESPPPPPP 312
Score = 22.2 bits (45), Expect(2) = 3.8
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 289 PPPPPPXV 266
PPPPPP V
Sbjct: 308 PPPPPPPV 315
>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
a protein.
Length = 1507
Score = 25.0 bits (52), Expect(2) = 3.8
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -2
Query: 307 PLXXXSPPPPPP 272
P+ SPPPPPP
Sbjct: 301 PIKEESPPPPPP 312
Score = 22.2 bits (45), Expect(2) = 3.8
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 289 PPPPPPXV 266
PPPPPP V
Sbjct: 308 PPPPPPPV 315
>Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical
protein F57B1.4 protein.
Length = 317
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +2
Query: 230 GAPXPXXXVGKXNXXGGGGXAXXXXGXXXPPPPGXXSPP 346
G P P G+ G G G P PPG PP
Sbjct: 177 GPPGPSGAPGQKGPSGAPGAPGQSGGASLPGPPGPAGPP 215
>Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical
protein F57B1.3 protein.
Length = 313
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +2
Query: 230 GAPXPXXXVGKXNXXGGGGXAXXXXGXXXPPPPGXXSPP 346
G P P G+ G G G P PPG PP
Sbjct: 173 GPPGPSGAPGQKGPSGAPGVPGQTGGASLPGPPGPAGPP 211
>Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.2 protein.
Length = 316
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +2
Query: 230 GAPXPXXXVGKXNXXGGGGXAXXXXGXXXPPPPGXXSPP 346
G P P G+ G G G P PPG PP
Sbjct: 176 GPPGPSGAPGQKGPSGAPGAPGQSGGAALPGPPGPAGPP 214
>Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.1 protein.
Length = 316
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +2
Query: 230 GAPXPXXXVGKXNXXGGGGXAXXXXGXXXPPPPGXXSPP 346
G P P G+ G G G P PPG PP
Sbjct: 176 GPPGPSGAPGQKGPSGAPGAPGQSGGAALPGPPGPAGPP 214
>X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +2
Query: 230 GAPXPXXXVGKXNXXGGGGXAXXXXGXXXPPPPGXXSPP 346
G P P G+ G G G P PPG PP
Sbjct: 176 GPPGPSGAPGQKGPSGAPGAPGQSGGAALPGPPGPAGPP 214
>X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +2
Query: 230 GAPXPXXXVGKXNXXGGGGXAXXXXGXXXPPPPGXXSPP 346
G P P G+ G G G P PPG PP
Sbjct: 176 GPPGPSGAPGQKGPSGAPGAPGQSGGAALPGPPGPAGPP 214
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Frame = -2
Query: 307 PLXXXSPPPPPPXVXFXXXXXGXGGPPXKFPP-XPXPXCXRPXG 179
P P PP P G GPP + PP P P RP G
Sbjct: 238 PSPSDPPGPPGPPGPPTRRPPGPPGPPTRRPPGPPGPPTRRPPG 281
>AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen protein
101 protein.
Length = 314
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +2
Query: 230 GAPXPXXXVGKXNXXGGGGXAXXXXGXXXPPPPGXXSPP 346
G P P G+ G G G P PPG PP
Sbjct: 174 GPPGPSGAPGQKGPSGAPGQPGRSGGASLPGPPGPAGPP 212
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +2
Query: 230 GAPXPXXXVGKXNXXGGGGXAXXXXGXXXPPPPGXXSPP 346
G P P G G G PPPPG PP
Sbjct: 181 GPPGPPGPDGNAGPAGAPGVPGPDGDAGSPPPPGPPGPP 219
>Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical
protein Y69H2.14 protein.
Length = 338
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +2
Query: 230 GAPXPXXXVGKXNXXGGGGXAXXXXGXXXPPPPGXXSPP 346
GAP P G+ G G + P PPG PP
Sbjct: 201 GAPGPPGPAGQPGQPGEPGHSDTSSTAGPPGPPGPGGPP 239
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = +2
Query: 173 PQXXGPXTXXGXXGGKFXGGAPXPXXXVGKXNXXGGGGXAXXXXGXXXPPPPG 331
P GP G GG GAP P G+ G G P PG
Sbjct: 223 PGPPGPGGPPGDAGGAGSDGAPGPQGPPGQDGTPGNAGPDGQPGSPGGPGLPG 275
>Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical
protein W01G7.1 protein.
Length = 627
Score = 23.8 bits (49), Expect(2) = 6.8
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 307 PLXXXSPPPPPP 272
PL PPPPPP
Sbjct: 513 PLPPLPPPPPPP 524
Score = 22.6 bits (46), Expect(2) = 6.8
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -2
Query: 232 PPXKFPPXPXPXCXRPXGLG 173
PP PP P P +P LG
Sbjct: 518 PPPPPPPKPKPAPVQPISLG 537
>AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAuer
Formation DAF-5,a Ski oncogene homolog involved in a
neuronal TGF betapathway (71.0 kD) (daf-5) protein.
Length = 627
Score = 23.8 bits (49), Expect(2) = 6.8
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 307 PLXXXSPPPPPP 272
PL PPPPPP
Sbjct: 513 PLPPLPPPPPPP 524
Score = 22.6 bits (46), Expect(2) = 6.8
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -2
Query: 232 PPXKFPPXPXPXCXRPXGLG 173
PP PP P P +P LG
Sbjct: 518 PPPPPPPKPKPAPVQPISLG 537
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -2
Query: 307 PLXXXSP-PPPPPXVXFXXXXXGXGGPPXKFPPXPXP 200
PL +P PPPPP V GGPP PP P P
Sbjct: 530 PLSTGAPTPPPPPPVGM-----ANGGPP---PPPPLP 558
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,297,981
Number of Sequences: 27780
Number of extensions: 236169
Number of successful extensions: 2532
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 673
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1902
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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