Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_J02
(739 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_1039 + 25610200-25610538,25611022-25611143,25611243-256113... 68 7e-12
02_03_0404 + 18648632-18648669,18649319-18649379,18649449-186494... 38 0.006
04_03_0767 + 19389337-19389381,19390586-19390643,19390720-193907... 35 0.059
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 34 0.10
12_01_0526 - 4171313-4171417,4171514-4171597,4171688-4171758,417... 32 0.41
05_05_0107 + 22442118-22443437,22443775-22443873 31 0.95
03_02_0889 - 12195322-12195894 31 1.3
05_05_0005 + 21442819-21442916,21443053-21443119,21443226-214432... 30 1.7
02_05_0684 - 30880527-30880753,30881952-30882124,30882687-308827... 30 2.2
04_04_1596 + 34684943-34686340,34688085-34688175,34688290-346883... 29 5.1
04_04_1163 - 31398565-31398654,31398729-31398812,31398893-313990... 29 5.1
03_05_1134 + 30624373-30624378,30624474-30624592,30624729-306248... 29 5.1
07_03_0249 - 15816515-15816868,15817749-15817958,15818051-158182... 28 6.7
03_02_0504 - 8976973-8979414 28 6.7
02_05_1006 + 33448476-33448915,33449016-33449083,33449681-334497... 28 6.7
06_02_0037 - 10856616-10856915,10857527-10860238 28 8.9
05_05_0031 - 21712772-21713050 28 8.9
04_04_1012 - 30104401-30104955,30105066-30106841 28 8.9
04_04_1005 - 30043698-30044252,30044363-30046138 28 8.9
01_01_0091 - 719842-720902,721042-721071,721521-722226 28 8.9
>12_02_1039 +
25610200-25610538,25611022-25611143,25611243-25611390,
25611681-25611818,25612106-25612165,25612234-25612392,
25612714-25612912,25613156-25613260,25613339-25613475,
25613812-25614037,25614119-25614282,25614408-25614524,
25614622-25614864,25614959-25615054,25615270-25615287
Length = 756
Score = 68.1 bits (159), Expect = 7e-12
Identities = 36/89 (40%), Positives = 56/89 (62%)
Frame = -2
Query: 276 NASKEMKIHPKAVKGDKNQVGAPMPGTVLTIKVKEGDKVEKGQPIAVLSAMKMEMIVQAP 97
+AS E + HPK V APM G V+ + +K+G +VE+GQP+ V+ AMKME +V+AP
Sbjct: 672 SASSEARSHPKG------SVLAPMAGLVVKVLLKDGARVEEGQPVMVMEAMKMEHVVKAP 725
Query: 96 KAGTVKTVSITNGQKLEGDDLICTIE*KK 10
AG V+ + T GQ++ ++ T++ K
Sbjct: 726 CAGYVEGLKATAGQQVFDSSVLFTVKENK 754
>02_03_0404 +
18648632-18648669,18649319-18649379,18649449-18649476,
18649787-18649861,18649929-18649984,18650085-18650129,
18650224-18650475,18650586-18650680,18651114-18651204,
18651356-18651466,18651556-18651750,18651827-18652018
Length = 412
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -2
Query: 201 GTVLTIKVKEGDKVEKGQPIAVLSAMKMEMIVQAPKAGTVKTVSITNG 58
GT+ T K GD+VE +PIA + K+ M V +P+AG ++ + G
Sbjct: 60 GTLATFLKKPGDRVEADEPIAQIETDKVTMDVASPEAGIIEKFVASEG 107
>04_03_0767 +
19389337-19389381,19390586-19390643,19390720-19390759,
19390859-19390926,19391007-19391081,19391161-19391216,
19391317-19391361,19391450-19391701,19391787-19391881,
19392395-19392485,19392578-19392688,19392788-19392982,
19393071-19393262
Length = 440
Score = 35.1 bits (77), Expect = 0.059
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = -2
Query: 201 GTVLTIKVKEGDKVEKGQPIAVLSAMKMEMIVQAPKAGTVKTVSITNG 58
GT+ K GD+VE +PIA + K+ + V +P+AG ++ + G
Sbjct: 88 GTLANFLKKPGDRVEADEPIAQIETDKVTIDVASPEAGVIEKFIASEG 135
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 34.3 bits (75), Expect = 0.10
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -2
Query: 201 GTVLTIKVKEGDKVEKGQPIAVLSAMKMEMIVQAPKAGTVKTVSITNGQ 55
G +++ EGD+V KG P+ V+ + K +M V+ G V V + G+
Sbjct: 56 GRIVSWTAAEGDRVAKGDPVVVVESDKADMDVETFYDGIVAVVLVPAGE 104
>12_01_0526 -
4171313-4171417,4171514-4171597,4171688-4171758,
4171814-4171891,4174482-4174569,4174659-4174850,
4174939-4175802
Length = 493
Score = 32.3 bits (70), Expect = 0.41
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = -2
Query: 201 GTVLTIKVKEGDKVEKGQPIAVLSAMKMEMIVQAPKAGTVKTVSITNGQ 55
G +++ EGD++ KG P+ V+ + K +M V+ G + V + G+
Sbjct: 64 GKIVSWTASEGDRLAKGDPVVVVESDKADMDVETFHDGFLAAVLVPAGE 112
>05_05_0107 + 22442118-22443437,22443775-22443873
Length = 472
Score = 31.1 bits (67), Expect = 0.95
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Frame = +2
Query: 170 PSFTLIVRTVPGIGAPT*FLSPFTAFGWIFISLLAFSSLMKTDRSCPLSSKKTSRSPAAV 349
PS ++ P G+ L TA + +S+LA L+ L++ + SR PAAV
Sbjct: 151 PSLAVVRSPAPFPGSNATVLGAITAVPYN-LSVLAVDGLI-VPSGFDLAASE-SRPPAAV 207
Query: 350 MSSDTATVLMSRGLSALYLNLDGVADR-GADQEGLGVQMF 466
+ + ++A L GVAD AD+ G G+ +F
Sbjct: 208 NITKVLADARAFNVAASMLEASGVADEFEADERGAGITVF 247
>03_02_0889 - 12195322-12195894
Length = 190
Score = 30.7 bits (66), Expect = 1.3
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Frame = -1
Query: 727 VGGGVPAGSHRIPYGGFPEPLRSKVLKDM---PRIEGRPGKELPSLNFDKXKGELKESFP 557
VGG +PAG+ + +G F E L + L D P E PGK+ D +G++KE+F
Sbjct: 72 VGGYIPAGAAGLRFGDF-EALH-RALGDALFGPVEEEEPGKQ----GEDDDEGDMKEAFR 125
Query: 556 --DIDDEDVMSAA 524
D D + +SAA
Sbjct: 126 VFDEDGDGFISAA 138
>05_05_0005 +
21442819-21442916,21443053-21443119,21443226-21443291,
21443368-21443414,21443480-21443543,21443627-21443707,
21443781-21443823,21443912-21443961,21444262-21444343,
21445045-21445120,21445451-21445558,21445782-21445833,
21445911-21446570,21446652-21448067
Length = 969
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/79 (27%), Positives = 37/79 (46%)
Frame = -2
Query: 381 DIRTVAVSEDMTAAGEREVFFELNGQLRSVFIRDENASKEMKIHPKAVKGDKNQVGAPMP 202
DI + S+ T+ G +LN +RS+ D S E + P+ ++G+KN GA +
Sbjct: 334 DIDSTQSSDRSTSGGAPSTDSKLN-DIRSIQDADRADSDEKCVTPEDLRGNKNISGAELK 392
Query: 201 GTVLTIKVKEGDKVEKGQP 145
+ V + + E QP
Sbjct: 393 RQDSSKSVHQHHRGESKQP 411
>02_05_0684 -
30880527-30880753,30881952-30882124,30882687-30882754,
30882860-30882973,30883281-30883438,30883516-30883654,
30883851-30883907,30884064-30884140,30884324-30884462,
30884590-30884668,30885047-30885174,30885269-30885352,
30886072-30886191,30886274-30886375,30886470-30886617,
30887404-30887749,30887851-30887968,30888309-30888370,
30888798-30888947,30889049-30889169,30889269-30889319,
30889427-30889567
Length = 933
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -1
Query: 205 ARNCSHYQSEGRRQSREGAADSRALRYENGNDRSSPQG 92
A N S +S ++R +ADSR RYENG+ G
Sbjct: 879 ASNGSVDRSSSHNETRSRSADSRGKRYENGDVNGGNSG 916
>04_04_1596 +
34684943-34686340,34688085-34688175,34688290-34688354,
34688530-34688581,34688747-34688829,34688942-34689035,
34689468-34690051
Length = 788
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = -2
Query: 456 TPRPSWSAPRSATPSRLR*SAERPLDIRTVAVSEDMTAAG 337
+PR S S+PRS TPS S RP + VA +E+ ++G
Sbjct: 122 SPRVSSSSPRSPTPSPPSSSPPRPAPV--VAAAEEPRSSG 159
>04_04_1163 -
31398565-31398654,31398729-31398812,31398893-31399037,
31399118-31399239,31399338-31399376,31399491-31399601,
31399682-31399804,31399946-31400032,31400136-31400207,
31400349-31400621,31400704-31400895,31400988-31401171,
31401339-31401480,31401578-31401821,31401959-31402603,
31403024-31403293
Length = 940
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +2
Query: 329 SRSPAAVMSSDTATVLMSRGLSALYLNLDGVADRGAD 439
S +PA SSD+A V M R +S L + +DG++D D
Sbjct: 760 SLAPARGSSSDSAGV-MDRVVSQLLVEIDGLSDNSQD 795
>03_05_1134 +
30624373-30624378,30624474-30624592,30624729-30624807,
30625784-30625858,30625954-30626028,30626314-30626651,
30626881-30627004,30627070-30627093
Length = 279
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = -2
Query: 378 IRTVAVSEDMTAAGEREV--FFELNGQLRSVFIR 283
+RTV V AGEREV FF +G++ V IR
Sbjct: 8 VRTVRVRNISDLAGEREVREFFSFSGEIEHVDIR 41
>07_03_0249 -
15816515-15816868,15817749-15817958,15818051-15818245,
15818318-15818393,15819982-15820021,15820155-15820283,
15820363-15820405
Length = 348
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = -1
Query: 184 QSEGRRQS---REGAADSRALRYENGNDRSSPQGWYRQDRLDYKRTKTRRR 41
++ GR +S R+ ++ R+ Y NG D + YR D + R++ R R
Sbjct: 287 RNRGRERSHDHRDRGSEYRSSSYRNGRDSERDRHRYRSDDMRKDRSRVRSR 337
>03_02_0504 - 8976973-8979414
Length = 813
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -1
Query: 178 EGRRQSREGAADSRALRYENGNDRSSPQGWYRQDRLDYKRTKTR 47
+GR +G R R +GND P+ W R DR D + + R
Sbjct: 352 DGRHDRDQGGRGGRGRRRGSGNDH--PRPWRRNDRDDDRDDRGR 393
>02_05_1006 +
33448476-33448915,33449016-33449083,33449681-33449751,
33449905-33450156,33450473-33450636,33450731-33450773,
33451044-33451161,33451384-33451481,33451550-33451594
Length = 432
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/31 (51%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Frame = +1
Query: 487 GNGRSRSRPAGTWPPTSRP---RRLCLGKIL 570
G GRSRSR WPP P RL LG +L
Sbjct: 49 GPGRSRSRGISRWPPPPPPLQGLRLDLGLLL 79
>06_02_0037 - 10856616-10856915,10857527-10860238
Length = 1003
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 190 ENSSGHRGTHLILIAFHRLRVDLHF 264
+N GH G LIL+A H +R + F
Sbjct: 459 DNEGGHNGGDLILLATHAIRYKVFF 483
>05_05_0031 - 21712772-21713050
Length = 92
Score = 27.9 bits (59), Expect = 8.9
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +2
Query: 317 SKKTSRSPAAVMSSDTATVLMSRGLSALYLNLDGVADRGADQEGLGVQMFD--GPVLIAE 490
+++ +R PA ++S ATV + G A DG + G D EG G ++ D GPV++
Sbjct: 27 TRRAAREPAPELTSTHATVATNEGAWA----TDG--ELGGD-EGAGAELVDRAGPVILRA 79
Query: 491 TEEV 502
E+
Sbjct: 80 LSEL 83
>04_04_1012 - 30104401-30104955,30105066-30106841
Length = 776
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -1
Query: 178 EGRRQSREGAADSRALRYENGNDRSSPQGWYRQDRLDYKRTKTR 47
+GR +G R R +GND P+ W R DR D + + R
Sbjct: 352 DGRHARDQGGRGGRGRRRGSGNDH--PRPWRRNDRDDDRDDRGR 393
>04_04_1005 - 30043698-30044252,30044363-30046138
Length = 776
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -1
Query: 178 EGRRQSREGAADSRALRYENGNDRSSPQGWYRQDRLDYKRTKTR 47
+GR +G R R +GND P+ W R DR D + + R
Sbjct: 352 DGRHARDQGGRGGRGRRRGSGNDH--PRPWRRNDRDDDRDDRGR 393
>01_01_0091 - 719842-720902,721042-721071,721521-722226
Length = 598
Score = 27.9 bits (59), Expect = 8.9
Identities = 24/67 (35%), Positives = 31/67 (46%)
Frame = +2
Query: 266 LLAFSSLMKTDRSCPLSSKKTSRSPAAVMSSDTATVLMSRGLSALYLNLDGVADRGADQE 445
L FSS +T P SK ++ +S T VL SALYL+L D D+
Sbjct: 220 LCGFSSQRRTAFCKPHGSKSPAKVIIVAVSVPTIVVLTLVVASALYLSLKTKND---DEI 276
Query: 446 GLGVQMF 466
L V+MF
Sbjct: 277 QLKVEMF 283
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,908,073
Number of Sequences: 37544
Number of extensions: 416808
Number of successful extensions: 1598
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1597
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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