Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_J02
         (739 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    25   0.74 
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          24   1.3  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              24   1.7  
AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    24   1.7  
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    24   1.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   3.0  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   6.9  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     22   6.9  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   6.9  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 25.0 bits (52), Expect = 0.74
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +3

Query: 639 GMSFRTFDLNGSGNPPYGIRWLPAGTPP 722
           GM  RT     +G+PP  I WL  G  P
Sbjct: 625 GMRTRTVCGVAAGDPPLTISWLKDGQSP 652



 Score = 23.0 bits (47), Expect = 3.0
 Identities = 11/35 (31%), Positives = 13/35 (37%)
 Frame = +3

Query: 618 PGRPSILGMSFRTFDLNGSGNPPYGIRWLPAGTPP 722
           P R      S    D   +G+PP  I W  A   P
Sbjct: 37  PSRVEFSNSSGAWLDCTATGSPPLNIDWSTADGHP 71



 Score = 22.2 bits (45), Expect = 5.2
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +3

Query: 666 NGSGNPPYGIRWLPAGTPPPTRGR 737
           + +GNP   + W   G   PT GR
Sbjct: 444 SAAGNPTPQVTWALDGFALPTNGR 467


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 725 RWWSTCREPSDT 690
           RWWS  REP+ T
Sbjct: 44  RWWSRPREPAQT 55


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = +3

Query: 654 TFDLNGSGNPPYGIRWLPAGTP 719
           TF  N  GNP   + WL  G P
Sbjct: 326 TFTCNVRGNPIKTVSWLKDGKP 347


>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = -2

Query: 315 LNGQLRSVFIRDENASKEMKIHPKAVKGDKNQV 217
           L+GQ R  F +DE     MK    A K  KN V
Sbjct: 54  LDGQFRGEFPQDERLMCYMKCIMIATKAMKNDV 86


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = -2

Query: 315 LNGQLRSVFIRDENASKEMKIHPKAVKGDKNQV 217
           L+GQ R  F +DE     MK    A K  KN V
Sbjct: 28  LDGQFRGEFPQDERLMCYMKCIMIATKAMKNDV 60


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 11/35 (31%), Positives = 13/35 (37%)
 Frame = +3

Query: 618 PGRPSILGMSFRTFDLNGSGNPPYGIRWLPAGTPP 722
           P R      S    D   +G+PP  I W  A   P
Sbjct: 37  PSRVEFSNSSGAWLDCTATGSPPLNIDWSTADGHP 71



 Score = 22.2 bits (45), Expect = 5.2
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +3

Query: 666 NGSGNPPYGIRWLPAGTPPPTRGR 737
           + +GNP   + W   G   PT GR
Sbjct: 444 SAAGNPTPQVTWALDGFALPTNGR 467


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = -1

Query: 694 IPYGGFPEPLRSKVLKDMPRIEGRPGKELPSLN 596
           +PY    E   SK L+     EGR    +P +N
Sbjct: 44  LPYVEIIEQPASKALRFRYECEGRSAGSIPGVN 76


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = -1

Query: 694 IPYGGFPEPLRSKVLKDMPRIEGRPGKELPSLN 596
           +PY    E   SK L+     EGR    +P +N
Sbjct: 44  LPYVEIIEQPASKALRFRYECEGRSAGSIPGVN 76


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 673 QGILHTVSDGSLQVLHH 723
           +G LH+V  G+L  LH+
Sbjct: 699 EGYLHSVVSGALDRLHY 715


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,749
Number of Sequences: 438
Number of extensions: 3913
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)