Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_I24
         (745 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81128-2|CAB03397.2|  232|Caenorhabditis elegans Hypothetical pr...    55   6e-08
Z81038-7|CAB02764.1|  453|Caenorhabditis elegans Hypothetical pr...    31   1.1  
AF039569-1|AAB99999.1|  451|Caenorhabditis elegans aryl hydrocar...    31   1.1  
Z75531-4|CAA99805.1|  408|Caenorhabditis elegans Hypothetical pr...    30   2.0  
AL132948-5|CAC51071.1|  321|Caenorhabditis elegans Hypothetical ...    29   2.6  
U97549-5|AAO91739.1|  212|Caenorhabditis elegans Dopamine recept...    28   8.0  
U97549-4|AAO91736.1|  460|Caenorhabditis elegans Dopamine recept...    28   8.0  
U23523-7|AAC46562.2|   85|Caenorhabditis elegans Hypothetical pr...    28   8.0  

>Z81128-2|CAB03397.2|  232|Caenorhabditis elegans Hypothetical
           protein T23D8.2 protein.
          Length = 232

 Score = 54.8 bits (126), Expect = 6e-08
 Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
 Frame = -2

Query: 522 EAVFXELQRQFECCGNTGAINYGQFT-LPESCCVKKSILSTFAGNNCTVDAANPGCGPKI 346
           E+ + +  + FECCG T + ++  FT +P+SCC+++  +   A  N  +    PGC   +
Sbjct: 132 ESAWDKTHQLFECCGVTNSSDWLTFTTIPDSCCIEE--IEGCARENAPL--FEPGCIHSV 187

Query: 345 GELYQKWNKPIAGVALGVACVEVVGALFALCLANSI 238
            +   K    + G+   +A +++VG  FA CL+ SI
Sbjct: 188 EQWVLKNGAMVGGICAVLAAIQLVGVCFACCLSKSI 223


>Z81038-7|CAB02764.1|  453|Caenorhabditis elegans Hypothetical
           protein C25A1.11 protein.
          Length = 453

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -3

Query: 221 GTPKMKTSRDEHSNKKKKKNDHFTHFTNLLAAQVP 117
           G  K + +R+ HS  ++++ +  TH+ N LA  VP
Sbjct: 38  GENKERFARENHSEIERRRRNKMTHYINELAEMVP 72


>AF039569-1|AAB99999.1|  451|Caenorhabditis elegans aryl hydrocarbon
           receptor nucleartranslocator ortholog AHA-1 protein.
          Length = 451

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -3

Query: 221 GTPKMKTSRDEHSNKKKKKNDHFTHFTNLLAAQVP 117
           G  K + +R+ HS  ++++ +  TH+ N LA  VP
Sbjct: 38  GENKERFARENHSEIERRRRNKMTHYINELAEMVP 72


>Z75531-4|CAA99805.1|  408|Caenorhabditis elegans Hypothetical
           protein C54D10.4 protein.
          Length = 408

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = -2

Query: 504 LQRQFECCGNTGAINYGQF 448
           +QR++ CCG  GAI+YG F
Sbjct: 280 VQRRYCCCGYNGAIDYGFF 298


>AL132948-5|CAC51071.1|  321|Caenorhabditis elegans Hypothetical
           protein Y39B6A.6 protein.
          Length = 321

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = -2

Query: 504 LQRQFECCGNTGAINYGQF--TLPESCCVK 421
           LQ  F CCGN G  ++  F   +P SC ++
Sbjct: 200 LQTAFRCCGNAGCSDFRVFRQDIPRSCDIR 229


>U97549-5|AAO91739.1|  212|Caenorhabditis elegans Dopamine receptor
           protein 1, isoformd protein.
          Length = 212

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +2

Query: 239 MELARHSANRAPTTSTQATPR 301
           M ++RH + R+ TT+T ATPR
Sbjct: 1   MTVSRHYSRRSTTTTTTATPR 21


>U97549-4|AAO91736.1|  460|Caenorhabditis elegans Dopamine receptor
           protein 1, isoforma protein.
          Length = 460

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +2

Query: 239 MELARHSANRAPTTSTQATPR 301
           M ++RH + R+ TT+T ATPR
Sbjct: 249 MTVSRHYSRRSTTTTTTATPR 269


>U23523-7|AAC46562.2|   85|Caenorhabditis elegans Hypothetical
           protein F53A9.7 protein.
          Length = 85

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 12/34 (35%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
 Frame = -3

Query: 677 HEXNXXAGDHHXAS-GDQXXXFHXRXEHQGGHYG 579
           H      G+HH    G Q    H    H GGH+G
Sbjct: 50  HHEESHHGEHHGGHHGVQHYESHHESHHHGGHHG 83


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,981,492
Number of Sequences: 27780
Number of extensions: 251914
Number of successful extensions: 749
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 745
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)