Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_I18
(741 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y17397-1|CAA76763.1| 1690|Homo sapiens collagen alpha 4 type IV ... 36 0.15
X81053-1|CAA56943.1| 1690|Homo sapiens type IV collagen alpha 4 ... 36 0.15
AC079235-1|AAY14670.1| 1324|Homo sapiens unknown protein. 36 0.15
X15332-1|CAA33387.1| 1078|Homo sapiens alpha-1 (III) collagen pr... 35 0.27
U47004-2|AAB19039.1| 1690|Homo sapiens collagen type IV a6 chain... 35 0.27
U47004-1|AAB19038.1| 1691|Homo sapiens collagen type IV a6 chain... 35 0.27
U04845-1|AAA19569.2| 1691|Homo sapiens A type IV collagen protein. 35 0.27
D63562-1|BAA09791.1| 1600|Homo sapiens a6(IV) collagen protein. 35 0.27
D21337-1|BAA04809.1| 1678|Homo sapiens collagen protein. 35 0.27
AL136080-2|CAI40758.1| 1691|Homo sapiens collagen type IV alpha ... 35 0.27
AL136080-1|CAI40756.1| 1690|Homo sapiens collagen type IV alpha ... 35 0.27
AL109943-2|CAI42995.1| 1691|Homo sapiens collagen type IV alpha ... 35 0.27
AL109943-1|CAI42993.1| 1690|Homo sapiens collagen type IV alpha ... 35 0.27
AL034369-3|CAI42047.1| 1691|Homo sapiens collagen type IV alpha ... 35 0.27
AL034369-2|CAI42045.1| 1690|Homo sapiens collagen type IV alpha ... 35 0.27
AL031177-13|CAI43140.1| 1691|Homo sapiens collagen type IV alpha... 35 0.27
AL031177-12|CAI43139.1| 1690|Homo sapiens collagen type IV alpha... 35 0.27
M65158-1|AAA96439.1| 625|Homo sapiens type VII collagen protein. 34 0.47
L23982-1|AAA58965.1| 2912|Homo sapiens collagen type VII protein. 34 0.47
L02870-1|AAA75438.1| 2944|Homo sapiens alpha-1 type VII collagen... 34 0.47
X14420-1|CAA32583.1| 1466|Homo sapiens prepro-alpha-1 type 3 col... 33 0.81
BC028178-1|AAH28178.1| 1163|Homo sapiens COL3A1 protein protein. 33 0.81
AY016295-2|AAL13167.1| 1466|Homo sapiens type III preprocollagen... 33 0.81
AC066694-1|AAY24164.1| 1466|Homo sapiens unknown protein. 33 0.81
X98411-1|CAA67058.1| 782|Homo sapiens myosin-IF protein. 32 1.9
BC082760-1|AAH82760.1| 1062|Homo sapiens ATXN2L protein protein. 32 1.9
AY082886-1|AAL92872.1| 1600|Homo sapiens eukaryotic translation ... 32 1.9
AL845446-1|CAM25804.1| 332|Homo sapiens collagen, type XI, alph... 32 1.9
AL844527-1|CAM25781.1| 332|Homo sapiens collagen, type XI, alph... 32 1.9
AL662824-15|CAM24940.1| 332|Homo sapiens collagen, type XI, alp... 32 1.9
AJ317974-1|CAC38072.3| 1044|Homo sapiens ataxin-2 related domain... 32 1.9
AJ317973-1|CAC38071.3| 1044|Homo sapiens ataxin-2 related domain... 32 1.9
AJ317972-1|CAC38070.3| 1097|Homo sapiens ataxin-2 related domain... 32 1.9
AJ317971-1|CAC38069.3| 1062|Homo sapiens ataxin-2 related domain... 32 1.9
AJ317970-1|CAC38068.1| 1075|Homo sapiens ataxin-2 related domain... 32 1.9
AF281070-2|AAM69365.1| 1600|Homo sapiens eukaryotic translation ... 32 1.9
AF002816-1|AAC78443.1| 177|Homo sapiens eucaryotic translation ... 32 1.9
D43951-1|BAA07895.3| 1175|Homo sapiens KIAA0099 protein protein. 32 2.5
BC063833-1|AAH63833.1| 1336|Homo sapiens collagen, type XVIII, a... 32 2.5
BC042075-1|AAH42075.1| 854|Homo sapiens COL22A1 protein protein. 32 2.5
BC013398-1|AAH13398.1| 1186|Homo sapiens pumilio homolog 1 (Dros... 32 2.5
AY484971-3|AAR83297.1| 1516|Homo sapiens type XVIII collagen mid... 32 2.5
AY484971-2|AAR83296.1| 1751|Homo sapiens type XVIII collagen lon... 32 2.5
AY484971-1|AAR83298.1| 1336|Homo sapiens type XVIII collagen sho... 32 2.5
AL445235-5|CAI22249.1| 1224|Homo sapiens pumilio homolog 1 (Dros... 32 2.5
AL445235-4|CAI22248.1| 925|Homo sapiens pumilio homolog 1 (Dros... 32 2.5
AL445235-3|CAI22247.1| 1189|Homo sapiens pumilio homolog 1 (Dros... 32 2.5
AL445235-2|CAI22246.1| 1186|Homo sapiens pumilio homolog 1 (Dros... 32 2.5
AL356320-6|CAH71205.1| 1224|Homo sapiens pumilio homolog 1 (Dros... 32 2.5
AL356320-5|CAH71204.1| 925|Homo sapiens pumilio homolog 1 (Dros... 32 2.5
AL356320-4|CAH71202.1| 1189|Homo sapiens pumilio homolog 1 (Dros... 32 2.5
AL356320-3|CAH71203.1| 1186|Homo sapiens pumilio homolog 1 (Dros... 32 2.5
AL163302-2|CAB90482.1| 1519|Homo sapiens human type XVIII collag... 32 2.5
AL138752-6|CAI13878.1| 559|Homo sapiens WD repeat domain 32 pro... 32 2.5
AK222605-1|BAD96325.1| 1188|Homo sapiens pumilio homolog 1 varia... 32 2.5
AF406780-1|AAN03620.1| 1626|Homo sapiens alpha 1 type XXII colla... 32 2.5
AF315592-1|AAG31807.1| 1186|Homo sapiens Pumilio 1 protein. 32 2.5
AF163302-1|AAD45121.1| 2161|Homo sapiens somatostatin receptor i... 32 2.5
AF018082-1|AAC39659.1| 1336|Homo sapiens type XVIII collagen pro... 32 2.5
AF018081-1|AAC39658.1| 1516|Homo sapiens type XVIII collagen pro... 32 2.5
AK098358-1|BAC05291.1| 134|Homo sapiens protein ( Homo sapiens ... 31 3.3
BC132918-1|AAI32919.1| 317|Homo sapiens similar to 4931415M17 p... 31 4.3
BC132916-1|AAI32917.1| 317|Homo sapiens similar to 4931415M17 p... 31 4.3
BC069238-1|AAH69238.1| 403|Homo sapiens zinc finger, CCHC domai... 31 4.3
AK130938-1|BAC85467.1| 306|Homo sapiens protein ( Homo sapiens ... 31 4.3
AK097419-1|BAC05044.1| 271|Homo sapiens protein ( Homo sapiens ... 31 4.3
Z83131-1|CAI42019.1| 632|Homo sapiens armadillo repeat containi... 31 5.7
X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing f... 31 5.7
BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor proline... 31 5.7
BC045732-1|AAH45732.1| 209|Homo sapiens LOC339742 protein protein. 31 5.7
BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein. 31 5.7
BC015926-1|AAH15926.1| 632|Homo sapiens ARMCX2 protein protein. 31 5.7
BC012541-1|AAH12541.1| 632|Homo sapiens armadillo repeat contai... 31 5.7
BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein. 31 5.7
AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor proline... 31 5.7
AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alph... 31 5.7
AF104913-1|AAC82471.1| 1560|Homo sapiens eukaryotic protein synt... 31 5.7
AF002815-1|AAC78442.1| 230|Homo sapiens eucaryotic translation ... 31 5.7
AB210013-1|BAE06095.1| 1624|Homo sapiens EIF4G1 variant protein ... 31 5.7
AB011084-1|BAA25438.2| 710|Homo sapiens KIAA0512 protein protein. 31 5.7
AC073149-2|AAY24061.1| 365|Homo sapiens unknown protein. 30 7.6
>Y17397-1|CAA76763.1| 1690|Homo sapiens collagen alpha 4 type IV
protein.
Length = 1690
Score = 35.9 bits (79), Expect = 0.15
Identities = 36/114 (31%), Positives = 44/114 (38%)
Frame = +3
Query: 54 PRGRAGYVRLNDLQVLRADRGPKVI*GPPTKRLPXHSYTRRPISVRGQNPVRVGGFPRST 233
P G G++ L + G + GPP HS R + GQ + G+P S
Sbjct: 796 PAGIPGFLGLKGPKGREGHAGFPGVPGPP-----GHSCERGAPGIPGQPGLP--GYPGSP 848
Query: 234 LQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGDAAGVPGYPAGPEP 395
P + P D P G G P LPGRPG A G PG P P P
Sbjct: 849 GAPGGKGQPGDVGPPGPAGMKGLP---------GLPGRPG-AHGPPGLPGIPGP 892
>X81053-1|CAA56943.1| 1690|Homo sapiens type IV collagen alpha 4 chain
protein.
Length = 1690
Score = 35.9 bits (79), Expect = 0.15
Identities = 36/114 (31%), Positives = 44/114 (38%)
Frame = +3
Query: 54 PRGRAGYVRLNDLQVLRADRGPKVI*GPPTKRLPXHSYTRRPISVRGQNPVRVGGFPRST 233
P G G++ L + G + GPP HS R + GQ + G+P S
Sbjct: 796 PAGIPGFLGLKGPKGREGHAGFPGVPGPP-----GHSCERGAPGIPGQPGLP--GYPGSP 848
Query: 234 LQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGDAAGVPGYPAGPEP 395
P + P D P G G P LPGRPG A G PG P P P
Sbjct: 849 GAPGGKGQPGDVGPPGPAGMKGLP---------GLPGRPG-AHGPPGLPGIPGP 892
>AC079235-1|AAY14670.1| 1324|Homo sapiens unknown protein.
Length = 1324
Score = 35.9 bits (79), Expect = 0.15
Identities = 36/114 (31%), Positives = 44/114 (38%)
Frame = +3
Query: 54 PRGRAGYVRLNDLQVLRADRGPKVI*GPPTKRLPXHSYTRRPISVRGQNPVRVGGFPRST 233
P G G++ L + G + GPP HS R + GQ + G+P S
Sbjct: 796 PAGIPGFLGLKGPKGREGHAGFPGVPGPP-----GHSCERGAPGIPGQPGLP--GYPGSP 848
Query: 234 LQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGDAAGVPGYPAGPEP 395
P + P D P G G P LPGRPG A G PG P P P
Sbjct: 849 GAPGGKGQPGDVGPPGPAGMKGLP---------GLPGRPG-AHGPPGLPGIPGP 892
>X15332-1|CAA33387.1| 1078|Homo sapiens alpha-1 (III) collagen
protein.
Length = 1078
Score = 35.1 bits (77), Expect = 0.27
Identities = 33/124 (26%), Positives = 43/124 (34%), Gaps = 3/124 (2%)
Frame = +3
Query: 48 PAPRGRAGYVRLNDLQVLRADRGPKVI*GPP-TKRLPXHSYTRRPISVRGQNPVRVGGFP 224
P PRG G + + + + G G P LP + R + RG P G P
Sbjct: 296 PGPRGERGEAGIPGVPGAKGEDGKDGSPGDPGANGLPGAAGERGALGSRG--PAGPNGIP 353
Query: 225 RSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPG--DAAGVPGYPAGPEPA 398
R P A P G G+ R +PG PG + G PG P +
Sbjct: 354 GEKGPAGERGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPGSQGES 413
Query: 399 CRVG 410
R G
Sbjct: 414 GRPG 417
>U47004-2|AAB19039.1| 1690|Homo sapiens collagen type IV a6 chain
protein.
Length = 1690
Score = 35.1 bits (77), Expect = 0.27
Identities = 35/116 (30%), Positives = 45/116 (38%), Gaps = 4/116 (3%)
Frame = +3
Query: 54 PRGRAGYVRLNDLQVLRADRGPKVI*GPPTKRLPXHSYTRRPISVRGQNPVRVG--GFPR 227
P+G G+ L+ L L +G GP +P + P +G + +G G P
Sbjct: 1163 PKGFPGFPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGLPGPKGEKGYPGIGIGAPGKPG 1222
Query: 228 STLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPG--DAAGVPGYPAGP 389
Q R P P G G S+ A PGRPG G PG PAGP
Sbjct: 1223 LRGQKGDRGFPGLQGPAGLPGAPGISLPSLIAGQPGDPGRPGLDGERGRPG-PAGP 1277
>U47004-1|AAB19038.1| 1691|Homo sapiens collagen type IV a6 chain
protein.
Length = 1691
Score = 35.1 bits (77), Expect = 0.27
Identities = 35/116 (30%), Positives = 45/116 (38%), Gaps = 4/116 (3%)
Frame = +3
Query: 54 PRGRAGYVRLNDLQVLRADRGPKVI*GPPTKRLPXHSYTRRPISVRGQNPVRVG--GFPR 227
P+G G+ L+ L L +G GP +P + P +G + +G G P
Sbjct: 1164 PKGFPGFPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGLPGPKGEKGYPGIGIGAPGKPG 1223
Query: 228 STLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPG--DAAGVPGYPAGP 389
Q R P P G G S+ A PGRPG G PG PAGP
Sbjct: 1224 LRGQKGDRGFPGLQGPAGLPGAPGISLPSLIAGQPGDPGRPGLDGERGRPG-PAGP 1278
>U04845-1|AAA19569.2| 1691|Homo sapiens A type IV collagen protein.
Length = 1691
Score = 35.1 bits (77), Expect = 0.27
Identities = 35/116 (30%), Positives = 45/116 (38%), Gaps = 4/116 (3%)
Frame = +3
Query: 54 PRGRAGYVRLNDLQVLRADRGPKVI*GPPTKRLPXHSYTRRPISVRGQNPVRVG--GFPR 227
P+G G+ L+ L L +G GP +P + P +G + +G G P
Sbjct: 1164 PKGFPGFPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGLPGPKGEKGYPGIGIGAPGKPG 1223
Query: 228 STLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPG--DAAGVPGYPAGP 389
Q R P P G G S+ A PGRPG G PG PAGP
Sbjct: 1224 LRGQKGDRGFPGLQGPAGLPGAPGISLPSLIAGQPGDPGRPGLDGERGRPG-PAGP 1278
>D63562-1|BAA09791.1| 1600|Homo sapiens a6(IV) collagen protein.
Length = 1600
Score = 35.1 bits (77), Expect = 0.27
Identities = 35/116 (30%), Positives = 45/116 (38%), Gaps = 4/116 (3%)
Frame = +3
Query: 54 PRGRAGYVRLNDLQVLRADRGPKVI*GPPTKRLPXHSYTRRPISVRGQNPVRVG--GFPR 227
P+G G+ L+ L L +G GP +P + P +G + +G G P
Sbjct: 1159 PKGFPGFPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGLPGPKGEKGYPGIGIGAPGKPG 1218
Query: 228 STLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPG--DAAGVPGYPAGP 389
Q R P P G G S+ A PGRPG G PG PAGP
Sbjct: 1219 LRGQKGDRGFPGLQGPAGLPGAPGISLPSLIAGQPGDPGRPGLDGERGRPG-PAGP 1273
>D21337-1|BAA04809.1| 1678|Homo sapiens collagen protein.
Length = 1678
Score = 35.1 bits (77), Expect = 0.27
Identities = 35/116 (30%), Positives = 45/116 (38%), Gaps = 4/116 (3%)
Frame = +3
Query: 54 PRGRAGYVRLNDLQVLRADRGPKVI*GPPTKRLPXHSYTRRPISVRGQNPVRVG--GFPR 227
P+G G+ L+ L L +G GP +P + P +G + +G G P
Sbjct: 1163 PKGFPGFPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGLPGPKGEKGYPGIGIGAPGKPG 1222
Query: 228 STLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPG--DAAGVPGYPAGP 389
Q R P P G G S+ A PGRPG G PG PAGP
Sbjct: 1223 LRGQKGDRGFPGLQGPAGLPGAPGISLPSLIAGQPGDPGRPGLDGERGRPG-PAGP 1277
>AL136080-2|CAI40758.1| 1691|Homo sapiens collagen type IV alpha 6
protein.
Length = 1691
Score = 35.1 bits (77), Expect = 0.27
Identities = 35/116 (30%), Positives = 45/116 (38%), Gaps = 4/116 (3%)
Frame = +3
Query: 54 PRGRAGYVRLNDLQVLRADRGPKVI*GPPTKRLPXHSYTRRPISVRGQNPVRVG--GFPR 227
P+G G+ L+ L L +G GP +P + P +G + +G G P
Sbjct: 1164 PKGFPGFPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGLPGPKGEKGYPGIGIGAPGKPG 1223
Query: 228 STLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPG--DAAGVPGYPAGP 389
Q R P P G G S+ A PGRPG G PG PAGP
Sbjct: 1224 LRGQKGDRGFPGLQGPAGLPGAPGISLPSLIAGQPGDPGRPGLDGERGRPG-PAGP 1278
>AL136080-1|CAI40756.1| 1690|Homo sapiens collagen type IV alpha 6
protein.
Length = 1690
Score = 35.1 bits (77), Expect = 0.27
Identities = 35/116 (30%), Positives = 45/116 (38%), Gaps = 4/116 (3%)
Frame = +3
Query: 54 PRGRAGYVRLNDLQVLRADRGPKVI*GPPTKRLPXHSYTRRPISVRGQNPVRVG--GFPR 227
P+G G+ L+ L L +G GP +P + P +G + +G G P
Sbjct: 1163 PKGFPGFPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGLPGPKGEKGYPGIGIGAPGKPG 1222
Query: 228 STLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPG--DAAGVPGYPAGP 389
Q R P P G G S+ A PGRPG G PG PAGP
Sbjct: 1223 LRGQKGDRGFPGLQGPAGLPGAPGISLPSLIAGQPGDPGRPGLDGERGRPG-PAGP 1277
>AL109943-2|CAI42995.1| 1691|Homo sapiens collagen type IV alpha 6
protein.
Length = 1691
Score = 35.1 bits (77), Expect = 0.27
Identities = 35/116 (30%), Positives = 45/116 (38%), Gaps = 4/116 (3%)
Frame = +3
Query: 54 PRGRAGYVRLNDLQVLRADRGPKVI*GPPTKRLPXHSYTRRPISVRGQNPVRVG--GFPR 227
P+G G+ L+ L L +G GP +P + P +G + +G G P
Sbjct: 1164 PKGFPGFPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGLPGPKGEKGYPGIGIGAPGKPG 1223
Query: 228 STLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPG--DAAGVPGYPAGP 389
Q R P P G G S+ A PGRPG G PG PAGP
Sbjct: 1224 LRGQKGDRGFPGLQGPAGLPGAPGISLPSLIAGQPGDPGRPGLDGERGRPG-PAGP 1278
>AL109943-1|CAI42993.1| 1690|Homo sapiens collagen type IV alpha 6
protein.
Length = 1690
Score = 35.1 bits (77), Expect = 0.27
Identities = 35/116 (30%), Positives = 45/116 (38%), Gaps = 4/116 (3%)
Frame = +3
Query: 54 PRGRAGYVRLNDLQVLRADRGPKVI*GPPTKRLPXHSYTRRPISVRGQNPVRVG--GFPR 227
P+G G+ L+ L L +G GP +P + P +G + +G G P
Sbjct: 1163 PKGFPGFPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGLPGPKGEKGYPGIGIGAPGKPG 1222
Query: 228 STLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPG--DAAGVPGYPAGP 389
Q R P P G G S+ A PGRPG G PG PAGP
Sbjct: 1223 LRGQKGDRGFPGLQGPAGLPGAPGISLPSLIAGQPGDPGRPGLDGERGRPG-PAGP 1277
>AL034369-3|CAI42047.1| 1691|Homo sapiens collagen type IV alpha 6
protein.
Length = 1691
Score = 35.1 bits (77), Expect = 0.27
Identities = 35/116 (30%), Positives = 45/116 (38%), Gaps = 4/116 (3%)
Frame = +3
Query: 54 PRGRAGYVRLNDLQVLRADRGPKVI*GPPTKRLPXHSYTRRPISVRGQNPVRVG--GFPR 227
P+G G+ L+ L L +G GP +P + P +G + +G G P
Sbjct: 1164 PKGFPGFPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGLPGPKGEKGYPGIGIGAPGKPG 1223
Query: 228 STLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPG--DAAGVPGYPAGP 389
Q R P P G G S+ A PGRPG G PG PAGP
Sbjct: 1224 LRGQKGDRGFPGLQGPAGLPGAPGISLPSLIAGQPGDPGRPGLDGERGRPG-PAGP 1278
>AL034369-2|CAI42045.1| 1690|Homo sapiens collagen type IV alpha 6
protein.
Length = 1690
Score = 35.1 bits (77), Expect = 0.27
Identities = 35/116 (30%), Positives = 45/116 (38%), Gaps = 4/116 (3%)
Frame = +3
Query: 54 PRGRAGYVRLNDLQVLRADRGPKVI*GPPTKRLPXHSYTRRPISVRGQNPVRVG--GFPR 227
P+G G+ L+ L L +G GP +P + P +G + +G G P
Sbjct: 1163 PKGFPGFPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGLPGPKGEKGYPGIGIGAPGKPG 1222
Query: 228 STLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPG--DAAGVPGYPAGP 389
Q R P P G G S+ A PGRPG G PG PAGP
Sbjct: 1223 LRGQKGDRGFPGLQGPAGLPGAPGISLPSLIAGQPGDPGRPGLDGERGRPG-PAGP 1277
>AL031177-13|CAI43140.1| 1691|Homo sapiens collagen type IV alpha 6
protein.
Length = 1691
Score = 35.1 bits (77), Expect = 0.27
Identities = 35/116 (30%), Positives = 45/116 (38%), Gaps = 4/116 (3%)
Frame = +3
Query: 54 PRGRAGYVRLNDLQVLRADRGPKVI*GPPTKRLPXHSYTRRPISVRGQNPVRVG--GFPR 227
P+G G+ L+ L L +G GP +P + P +G + +G G P
Sbjct: 1164 PKGFPGFPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGLPGPKGEKGYPGIGIGAPGKPG 1223
Query: 228 STLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPG--DAAGVPGYPAGP 389
Q R P P G G S+ A PGRPG G PG PAGP
Sbjct: 1224 LRGQKGDRGFPGLQGPAGLPGAPGISLPSLIAGQPGDPGRPGLDGERGRPG-PAGP 1278
>AL031177-12|CAI43139.1| 1690|Homo sapiens collagen type IV alpha 6
protein.
Length = 1690
Score = 35.1 bits (77), Expect = 0.27
Identities = 35/116 (30%), Positives = 45/116 (38%), Gaps = 4/116 (3%)
Frame = +3
Query: 54 PRGRAGYVRLNDLQVLRADRGPKVI*GPPTKRLPXHSYTRRPISVRGQNPVRVG--GFPR 227
P+G G+ L+ L L +G GP +P + P +G + +G G P
Sbjct: 1163 PKGFPGFPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGLPGPKGEKGYPGIGIGAPGKPG 1222
Query: 228 STLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPG--DAAGVPGYPAGP 389
Q R P P G G S+ A PGRPG G PG PAGP
Sbjct: 1223 LRGQKGDRGFPGLQGPAGLPGAPGISLPSLIAGQPGDPGRPGLDGERGRPG-PAGP 1277
>M65158-1|AAA96439.1| 625|Homo sapiens type VII collagen protein.
Length = 625
Score = 34.3 bits (75), Expect = 0.47
Identities = 25/71 (35%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Frame = +3
Query: 189 RGQNPVRVG--GFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGD-- 356
R NP G G S P R P + P G +G+ P + LPGR GD
Sbjct: 498 RAGNPGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGEPGAPGQVIGGEGPGLPGRKGDPG 557
Query: 357 AAGVPGYPAGP 389
+G PG P GP
Sbjct: 558 PSGPPG-PRGP 567
>L23982-1|AAA58965.1| 2912|Homo sapiens collagen type VII protein.
Length = 2912
Score = 34.3 bits (75), Expect = 0.47
Identities = 25/71 (35%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Frame = +3
Query: 189 RGQNPVRVG--GFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGD-- 356
R NP G G S P R P + P G +G+ P + LPGR GD
Sbjct: 1312 RAGNPGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGEPGAPGQVIGGEGPGLPGRKGDPG 1371
Query: 357 AAGVPGYPAGP 389
+G PG P GP
Sbjct: 1372 PSGPPG-PRGP 1381
>L02870-1|AAA75438.1| 2944|Homo sapiens alpha-1 type VII collagen
protein.
Length = 2944
Score = 34.3 bits (75), Expect = 0.47
Identities = 25/71 (35%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Frame = +3
Query: 189 RGQNPVRVG--GFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGD-- 356
R NP G G S P R P + P G +G+ P + LPGR GD
Sbjct: 1312 RAGNPGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGEPGAPGQVIGGEGPGLPGRKGDPG 1371
Query: 357 AAGVPGYPAGP 389
+G PG P GP
Sbjct: 1372 PSGPPG-PRGP 1381
>X14420-1|CAA32583.1| 1466|Homo sapiens prepro-alpha-1 type 3
collagen protein.
Length = 1466
Score = 33.5 bits (73), Expect = 0.81
Identities = 33/124 (26%), Positives = 42/124 (33%), Gaps = 3/124 (2%)
Frame = +3
Query: 48 PAPRGRAGYVRLNDLQVLRADRGPKVI*GPP-TKRLPXHSYTRRPISVRGQNPVRVGGFP 224
P PRG G + + + + G G P LP + R RG P G P
Sbjct: 443 PGPRGERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRG--PAGPNGIP 500
Query: 225 RSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPG--DAAGVPGYPAGPEPA 398
R P A P G G+ R +PG PG + G PG P +
Sbjct: 501 GEKGPAGERGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPGSQGES 560
Query: 399 CRVG 410
R G
Sbjct: 561 GRPG 564
>BC028178-1|AAH28178.1| 1163|Homo sapiens COL3A1 protein protein.
Length = 1163
Score = 33.5 bits (73), Expect = 0.81
Identities = 33/124 (26%), Positives = 42/124 (33%), Gaps = 3/124 (2%)
Frame = +3
Query: 48 PAPRGRAGYVRLNDLQVLRADRGPKVI*GPP-TKRLPXHSYTRRPISVRGQNPVRVGGFP 224
P PRG G + + + + G G P LP + R RG P G P
Sbjct: 443 PGPRGERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRG--PAGPNGIP 500
Query: 225 RSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPG--DAAGVPGYPAGPEPA 398
R P A P G G+ R +PG PG + G PG P +
Sbjct: 501 GEKGPAGERGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPGSQGES 560
Query: 399 CRVG 410
R G
Sbjct: 561 GRPG 564
>AY016295-2|AAL13167.1| 1466|Homo sapiens type III preprocollagen
alpha 1 chain protein.
Length = 1466
Score = 33.5 bits (73), Expect = 0.81
Identities = 33/124 (26%), Positives = 42/124 (33%), Gaps = 3/124 (2%)
Frame = +3
Query: 48 PAPRGRAGYVRLNDLQVLRADRGPKVI*GPP-TKRLPXHSYTRRPISVRGQNPVRVGGFP 224
P PRG G + + + + G G P LP + R RG P G P
Sbjct: 443 PGPRGERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRG--PAGPNGIP 500
Query: 225 RSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPG--DAAGVPGYPAGPEPA 398
R P A P G G+ R +PG PG + G PG P +
Sbjct: 501 GEKGPAGERGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPGSQGES 560
Query: 399 CRVG 410
R G
Sbjct: 561 GRPG 564
>AC066694-1|AAY24164.1| 1466|Homo sapiens unknown protein.
Length = 1466
Score = 33.5 bits (73), Expect = 0.81
Identities = 33/124 (26%), Positives = 42/124 (33%), Gaps = 3/124 (2%)
Frame = +3
Query: 48 PAPRGRAGYVRLNDLQVLRADRGPKVI*GPP-TKRLPXHSYTRRPISVRGQNPVRVGGFP 224
P PRG G + + + + G G P LP + R RG P G P
Sbjct: 443 PGPRGERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRG--PAGPNGIP 500
Query: 225 RSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPG--DAAGVPGYPAGPEPA 398
R P A P G G+ R +PG PG + G PG P +
Sbjct: 501 GEKGPAGERGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPGSQGES 560
Query: 399 CRVG 410
R G
Sbjct: 561 GRPG 564
>X98411-1|CAA67058.1| 782|Homo sapiens myosin-IF protein.
Length = 782
Score = 32.3 bits (70), Expect = 1.9
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +3
Query: 258 PEDARPTGRRGDSRRPTTSVSAVTAALPGRPG--DAAGVPGYPAGPEP 395
P++++PTG+ +P S A T A PG P D G P P G P
Sbjct: 603 PKNSKPTGKGLAKGKPRRSSQAPTRAAPGAPQGMDRNGAPLCPQGGAP 650
>BC082760-1|AAH82760.1| 1062|Homo sapiens ATXN2L protein protein.
Length = 1062
Score = 32.3 bits (70), Expect = 1.9
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 8/79 (10%)
Frame = +3
Query: 234 LQPDTRRHPEDAR--PTGRRGDSRRPTTSVSAVTAALPGRPGDAAGVPGYPA------GP 389
L+P + P + P ++ +RRP S LPG +A PG PA GP
Sbjct: 2 LKPQPLQQPSQPQQPPPTQQAVARRPPGGTSPPNGGLPGPLATSAAPPGPPAAASPCLGP 61
Query: 390 EPACRVGTRYTADRVALPQ 446
A G R A+ + PQ
Sbjct: 62 VAAAGSGLRRGAEGILAPQ 80
>AY082886-1|AAL92872.1| 1600|Homo sapiens eukaryotic translation
initiation factor 4GI protein.
Length = 1600
Score = 32.3 bits (70), Expect = 1.9
Identities = 20/55 (36%), Positives = 27/55 (49%)
Frame = +3
Query: 228 STLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGDAAGVPGYPAGPE 392
ST Q P R ++ P+++ S V +A P RPG AA V YPAG +
Sbjct: 34 STPQATQMNTPSQPRQHFYPSRAQPPSSAASRVQSAAPARPGPAAHV--YPAGSQ 86
>AL845446-1|CAM25804.1| 332|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 332
Score = 32.3 bits (70), Expect = 1.9
Identities = 34/108 (31%), Positives = 46/108 (42%), Gaps = 2/108 (1%)
Frame = +3
Query: 36 SYEVP-APRGRAGYVRLNDLQVLRADRGPKVI*GPPTKRLPXHSYTRRPISVRGQNPVRV 212
++ VP AP+G DL RA GP+V GP R+P RR + +P +
Sbjct: 34 AWMVPRAPKGAWDPRESQDLLDNRAPLGPRVFPGP---RVPSALMERRVLKGSQGSPACL 90
Query: 213 GGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAV-TAALPGRPG 353
G P +QP + P+ R R D R A+ T PG PG
Sbjct: 91 GP-PGEVIQPLPIQMPKKTR---RSVDGSRLMQEDEAIPTGGAPGSPG 134
>AL844527-1|CAM25781.1| 332|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 332
Score = 32.3 bits (70), Expect = 1.9
Identities = 34/108 (31%), Positives = 46/108 (42%), Gaps = 2/108 (1%)
Frame = +3
Query: 36 SYEVP-APRGRAGYVRLNDLQVLRADRGPKVI*GPPTKRLPXHSYTRRPISVRGQNPVRV 212
++ VP AP+G DL RA GP+V GP R+P RR + +P +
Sbjct: 34 AWMVPRAPKGAWDPRESQDLLDNRAPLGPRVFPGP---RVPSALMERRVLKGSQGSPACL 90
Query: 213 GGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAV-TAALPGRPG 353
G P +QP + P+ R R D R A+ T PG PG
Sbjct: 91 GP-PGEVIQPLPIQMPKKTR---RSVDGSRLMQEDEAIPTGGAPGSPG 134
>AL662824-15|CAM24940.1| 332|Homo sapiens collagen, type XI, alpha
2 protein.
Length = 332
Score = 32.3 bits (70), Expect = 1.9
Identities = 34/108 (31%), Positives = 46/108 (42%), Gaps = 2/108 (1%)
Frame = +3
Query: 36 SYEVP-APRGRAGYVRLNDLQVLRADRGPKVI*GPPTKRLPXHSYTRRPISVRGQNPVRV 212
++ VP AP+G DL RA GP+V GP R+P RR + +P +
Sbjct: 34 AWMVPRAPKGAWDPRESQDLLDNRAPLGPRVFPGP---RVPSALMERRVLKGSQGSPACL 90
Query: 213 GGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAV-TAALPGRPG 353
G P +QP + P+ R R D R A+ T PG PG
Sbjct: 91 GP-PGEVIQPLPIQMPKKTR---RSVDGSRLMQEDEAIPTGGAPGSPG 134
>AJ317974-1|CAC38072.3| 1044|Homo sapiens ataxin-2 related domain
protein protein.
Length = 1044
Score = 32.3 bits (70), Expect = 1.9
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 8/79 (10%)
Frame = +3
Query: 234 LQPDTRRHPEDAR--PTGRRGDSRRPTTSVSAVTAALPGRPGDAAGVPGYPA------GP 389
L+P + P + P ++ +RRP S LPG +A PG PA GP
Sbjct: 2 LKPQPLQQPSQPQQPPPTQQAVARRPPGGTSPPNGGLPGPLATSAAPPGPPAAASPCLGP 61
Query: 390 EPACRVGTRYTADRVALPQ 446
A G R A+ + PQ
Sbjct: 62 VAAAGSGLRRGAEGILAPQ 80
>AJ317973-1|CAC38071.3| 1044|Homo sapiens ataxin-2 related domain
protein protein.
Length = 1044
Score = 32.3 bits (70), Expect = 1.9
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 8/79 (10%)
Frame = +3
Query: 234 LQPDTRRHPEDAR--PTGRRGDSRRPTTSVSAVTAALPGRPGDAAGVPGYPA------GP 389
L+P + P + P ++ +RRP S LPG +A PG PA GP
Sbjct: 2 LKPQPLQQPSQPQQPPPTQQAVARRPPGGTSPPNGGLPGPLATSAAPPGPPAAASPCLGP 61
Query: 390 EPACRVGTRYTADRVALPQ 446
A G R A+ + PQ
Sbjct: 62 VAAAGSGLRRGAEGILAPQ 80
>AJ317972-1|CAC38070.3| 1097|Homo sapiens ataxin-2 related domain
protein protein.
Length = 1097
Score = 32.3 bits (70), Expect = 1.9
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 8/79 (10%)
Frame = +3
Query: 234 LQPDTRRHPEDAR--PTGRRGDSRRPTTSVSAVTAALPGRPGDAAGVPGYPA------GP 389
L+P + P + P ++ +RRP S LPG +A PG PA GP
Sbjct: 2 LKPQPLQQPSQPQQPPPTQQAVARRPPGGTSPPNGGLPGPLATSAAPPGPPAAASPCLGP 61
Query: 390 EPACRVGTRYTADRVALPQ 446
A G R A+ + PQ
Sbjct: 62 VAAAGSGLRRGAEGILAPQ 80
>AJ317971-1|CAC38069.3| 1062|Homo sapiens ataxin-2 related domain
protein protein.
Length = 1062
Score = 32.3 bits (70), Expect = 1.9
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 8/79 (10%)
Frame = +3
Query: 234 LQPDTRRHPEDAR--PTGRRGDSRRPTTSVSAVTAALPGRPGDAAGVPGYPA------GP 389
L+P + P + P ++ +RRP S LPG +A PG PA GP
Sbjct: 2 LKPQPLQQPSQPQQPPPTQQAVARRPPGGTSPPNGGLPGPLATSAAPPGPPAAASPCLGP 61
Query: 390 EPACRVGTRYTADRVALPQ 446
A G R A+ + PQ
Sbjct: 62 VAAAGSGLRRGAEGILAPQ 80
>AJ317970-1|CAC38068.1| 1075|Homo sapiens ataxin-2 related domain
protein protein.
Length = 1075
Score = 32.3 bits (70), Expect = 1.9
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 8/79 (10%)
Frame = +3
Query: 234 LQPDTRRHPEDAR--PTGRRGDSRRPTTSVSAVTAALPGRPGDAAGVPGYPA------GP 389
L+P + P + P ++ +RRP S LPG +A PG PA GP
Sbjct: 2 LKPQPLQQPSQPQQPPPTQQAVARRPPGGTSPPNGGLPGPLATSAAPPGPPAAASPCLGP 61
Query: 390 EPACRVGTRYTADRVALPQ 446
A G R A+ + PQ
Sbjct: 62 VAAAGSGLRRGAEGILAPQ 80
>AF281070-2|AAM69365.1| 1600|Homo sapiens eukaryotic translation
initiation factor 4G I protein.
Length = 1600
Score = 32.3 bits (70), Expect = 1.9
Identities = 20/55 (36%), Positives = 27/55 (49%)
Frame = +3
Query: 228 STLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGDAAGVPGYPAGPE 392
ST Q P R ++ P+++ S V +A P RPG AA V YPAG +
Sbjct: 34 STPQATQMNTPSQPRQHFYPSRAQPPSSAASRVQSAAPARPGPAAHV--YPAGSQ 86
>AF002816-1|AAC78443.1| 177|Homo sapiens eucaryotic translation
initiation factor 4G isoform 2 protein.
Length = 177
Score = 32.3 bits (70), Expect = 1.9
Identities = 20/55 (36%), Positives = 27/55 (49%)
Frame = +3
Query: 228 STLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGDAAGVPGYPAGPE 392
ST Q P R ++ P+++ S V +A P RPG AA V YPAG +
Sbjct: 5 STPQATQMNTPSQPRQHFYPSRAQPPSSAASRVQSAAPARPGPAAHV--YPAGSQ 57
>D43951-1|BAA07895.3| 1175|Homo sapiens KIAA0099 protein protein.
Length = 1175
Score = 31.9 bits (69), Expect = 2.5
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +3
Query: 177 PISVRGQNPVRVGGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGD 356
P + +GQ V GG + L P+ + +G P + +AV +AL G
Sbjct: 508 PQAQQGQQQVLRGGASQRPLTPNQNQ----------QGQQTDPLVAAAAVNSALAFGQGL 557
Query: 357 AAGVPGYP 380
AAG+PGYP
Sbjct: 558 AAGMPGYP 565
>BC063833-1|AAH63833.1| 1336|Homo sapiens collagen, type XVIII,
alpha 1 protein.
Length = 1336
Score = 31.9 bits (69), Expect = 2.5
Identities = 33/101 (32%), Positives = 36/101 (35%), Gaps = 1/101 (0%)
Frame = +3
Query: 87 DLQVLRADRGPKVI*GPP-TKRLPXHSYTRRPISVRGQNPVRVGGFPRSTLQPDTRRHPE 263
DL+ LR RG GPP LP S P + G P P P
Sbjct: 479 DLEALRGPRGFPGPPGPPGVPGLPGEPGRFGVNSSDVPGPAGLPGVPGREGPPGFPGLPG 538
Query: 264 DARPTGRRGDSRRPTTSVSAVTAALPGRPGDAAGVPGYPAG 386
P GR G R S A PG G + G PG PAG
Sbjct: 539 PPGPPGREGPPGRTGQKGSLGEAGAPGHKG-SKGAPG-PAG 577
>BC042075-1|AAH42075.1| 854|Homo sapiens COL22A1 protein protein.
Length = 854
Score = 31.9 bits (69), Expect = 2.5
Identities = 32/114 (28%), Positives = 44/114 (38%), Gaps = 3/114 (2%)
Frame = +3
Query: 57 RGRAGYVRLNDLQVLRADRGPKVI*GPPTKRLPXHSYTRRPISVRGQNPVRVGGFPRSTL 236
+G G + L L+ R ++G GPP +T P Q P G P
Sbjct: 69 QGEKGELGLPGLKGDRGEKGEAGPAGPPGLPGTTSLFTPHPRMPGEQGPKGEKGDPGLPG 128
Query: 237 QPDTRRHPEDARP---TGRRGDSRRPTTSVSAVTAALPGRPGDAAGVPGYPAGP 389
+P + P + P TG G + + A PG PG G PG P+GP
Sbjct: 129 EPGLQGRPGELGPQGPTGPPGAKGQEGAHGAPGAAGNPGAPGH-VGAPG-PSGP 180
>BC013398-1|AAH13398.1| 1186|Homo sapiens pumilio homolog 1
(Drosophila) protein.
Length = 1186
Score = 31.9 bits (69), Expect = 2.5
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +3
Query: 177 PISVRGQNPVRVGGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGD 356
P + +GQ V GG + L P+ + +G P + +AV +AL G
Sbjct: 494 PQAQQGQQQVLRGGASQRPLTPNQNQ----------QGQQTDPLVAAAAVNSALAFGQGL 543
Query: 357 AAGVPGYP 380
AAG+PGYP
Sbjct: 544 AAGMPGYP 551
>AY484971-3|AAR83297.1| 1516|Homo sapiens type XVIII collagen middle
variant protein.
Length = 1516
Score = 31.9 bits (69), Expect = 2.5
Identities = 33/101 (32%), Positives = 36/101 (35%), Gaps = 1/101 (0%)
Frame = +3
Query: 87 DLQVLRADRGPKVI*GPP-TKRLPXHSYTRRPISVRGQNPVRVGGFPRSTLQPDTRRHPE 263
DL+ LR RG GPP LP S P + G P P P
Sbjct: 659 DLEALRGPRGFPGPPGPPGVPGLPGEPGRFGVNSSDVPGPAGLPGVPGREGPPGFPGLPG 718
Query: 264 DARPTGRRGDSRRPTTSVSAVTAALPGRPGDAAGVPGYPAG 386
P GR G R S A PG G + G PG PAG
Sbjct: 719 PPGPPGREGPPGRTGQKGSLGEAGAPGHKG-SKGAPG-PAG 757
>AY484971-2|AAR83296.1| 1751|Homo sapiens type XVIII collagen long
variant protein.
Length = 1751
Score = 31.9 bits (69), Expect = 2.5
Identities = 33/101 (32%), Positives = 36/101 (35%), Gaps = 1/101 (0%)
Frame = +3
Query: 87 DLQVLRADRGPKVI*GPP-TKRLPXHSYTRRPISVRGQNPVRVGGFPRSTLQPDTRRHPE 263
DL+ LR RG GPP LP S P + G P P P
Sbjct: 894 DLEALRGPRGFPGPPGPPGVPGLPGEPGRFGVNSSDVPGPAGLPGVPGREGPPGFPGLPG 953
Query: 264 DARPTGRRGDSRRPTTSVSAVTAALPGRPGDAAGVPGYPAG 386
P GR G R S A PG G + G PG PAG
Sbjct: 954 PPGPPGREGPPGRTGQKGSLGEAGAPGHKG-SKGAPG-PAG 992
>AY484971-1|AAR83298.1| 1336|Homo sapiens type XVIII collagen short
variant protein.
Length = 1336
Score = 31.9 bits (69), Expect = 2.5
Identities = 33/101 (32%), Positives = 36/101 (35%), Gaps = 1/101 (0%)
Frame = +3
Query: 87 DLQVLRADRGPKVI*GPP-TKRLPXHSYTRRPISVRGQNPVRVGGFPRSTLQPDTRRHPE 263
DL+ LR RG GPP LP S P + G P P P
Sbjct: 479 DLEALRGPRGFPGPPGPPGVPGLPGEPGRFGVNSSDVPGPAGLPGVPGREGPPGFPGLPG 538
Query: 264 DARPTGRRGDSRRPTTSVSAVTAALPGRPGDAAGVPGYPAG 386
P GR G R S A PG G + G PG PAG
Sbjct: 539 PPGPPGREGPPGRTGQKGSLGEAGAPGHKG-SKGAPG-PAG 577
>AL445235-5|CAI22249.1| 1224|Homo sapiens pumilio homolog 1
(Drosophila) protein.
Length = 1224
Score = 31.9 bits (69), Expect = 2.5
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +3
Query: 177 PISVRGQNPVRVGGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGD 356
P + +GQ V GG + L P+ + +G P + +AV +AL G
Sbjct: 530 PQAQQGQQQVLRGGASQRPLTPNQNQ----------QGQQTDPLVAAAAVNSALAFGQGL 579
Query: 357 AAGVPGYP 380
AAG+PGYP
Sbjct: 580 AAGMPGYP 587
>AL445235-4|CAI22248.1| 925|Homo sapiens pumilio homolog 1
(Drosophila) protein.
Length = 925
Score = 31.9 bits (69), Expect = 2.5
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +3
Query: 177 PISVRGQNPVRVGGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGD 356
P + +GQ V GG + L P+ + +G P + +AV +AL G
Sbjct: 231 PQAQQGQQQVLRGGASQRPLTPNQNQ----------QGQQTDPLVAAAAVNSALAFGQGL 280
Query: 357 AAGVPGYP 380
AAG+PGYP
Sbjct: 281 AAGMPGYP 288
>AL445235-3|CAI22247.1| 1189|Homo sapiens pumilio homolog 1
(Drosophila) protein.
Length = 1189
Score = 31.9 bits (69), Expect = 2.5
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +3
Query: 177 PISVRGQNPVRVGGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGD 356
P + +GQ V GG + L P+ + +G P + +AV +AL G
Sbjct: 495 PQAQQGQQQVLRGGASQRPLTPNQNQ----------QGQQTDPLVAAAAVNSALAFGQGL 544
Query: 357 AAGVPGYP 380
AAG+PGYP
Sbjct: 545 AAGMPGYP 552
>AL445235-2|CAI22246.1| 1186|Homo sapiens pumilio homolog 1
(Drosophila) protein.
Length = 1186
Score = 31.9 bits (69), Expect = 2.5
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +3
Query: 177 PISVRGQNPVRVGGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGD 356
P + +GQ V GG + L P+ + +G P + +AV +AL G
Sbjct: 494 PQAQQGQQQVLRGGASQRPLTPNQNQ----------QGQQTDPLVAAAAVNSALAFGQGL 543
Query: 357 AAGVPGYP 380
AAG+PGYP
Sbjct: 544 AAGMPGYP 551
>AL356320-6|CAH71205.1| 1224|Homo sapiens pumilio homolog 1
(Drosophila) protein.
Length = 1224
Score = 31.9 bits (69), Expect = 2.5
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +3
Query: 177 PISVRGQNPVRVGGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGD 356
P + +GQ V GG + L P+ + +G P + +AV +AL G
Sbjct: 530 PQAQQGQQQVLRGGASQRPLTPNQNQ----------QGQQTDPLVAAAAVNSALAFGQGL 579
Query: 357 AAGVPGYP 380
AAG+PGYP
Sbjct: 580 AAGMPGYP 587
>AL356320-5|CAH71204.1| 925|Homo sapiens pumilio homolog 1
(Drosophila) protein.
Length = 925
Score = 31.9 bits (69), Expect = 2.5
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +3
Query: 177 PISVRGQNPVRVGGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGD 356
P + +GQ V GG + L P+ + +G P + +AV +AL G
Sbjct: 231 PQAQQGQQQVLRGGASQRPLTPNQNQ----------QGQQTDPLVAAAAVNSALAFGQGL 280
Query: 357 AAGVPGYP 380
AAG+PGYP
Sbjct: 281 AAGMPGYP 288
>AL356320-4|CAH71202.1| 1189|Homo sapiens pumilio homolog 1
(Drosophila) protein.
Length = 1189
Score = 31.9 bits (69), Expect = 2.5
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +3
Query: 177 PISVRGQNPVRVGGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGD 356
P + +GQ V GG + L P+ + +G P + +AV +AL G
Sbjct: 495 PQAQQGQQQVLRGGASQRPLTPNQNQ----------QGQQTDPLVAAAAVNSALAFGQGL 544
Query: 357 AAGVPGYP 380
AAG+PGYP
Sbjct: 545 AAGMPGYP 552
>AL356320-3|CAH71203.1| 1186|Homo sapiens pumilio homolog 1
(Drosophila) protein.
Length = 1186
Score = 31.9 bits (69), Expect = 2.5
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +3
Query: 177 PISVRGQNPVRVGGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGD 356
P + +GQ V GG + L P+ + +G P + +AV +AL G
Sbjct: 494 PQAQQGQQQVLRGGASQRPLTPNQNQ----------QGQQTDPLVAAAAVNSALAFGQGL 543
Query: 357 AAGVPGYP 380
AAG+PGYP
Sbjct: 544 AAGMPGYP 551
>AL163302-2|CAB90482.1| 1519|Homo sapiens human type XVIII collagen
protein.
Length = 1519
Score = 31.9 bits (69), Expect = 2.5
Identities = 33/101 (32%), Positives = 36/101 (35%), Gaps = 1/101 (0%)
Frame = +3
Query: 87 DLQVLRADRGPKVI*GPP-TKRLPXHSYTRRPISVRGQNPVRVGGFPRSTLQPDTRRHPE 263
DL+ LR RG GPP LP S P + G P P P
Sbjct: 659 DLEALRGPRGFPGPPGPPGVPGLPGEPGRFGVNSSDVPGPAGLPGVPGREGPPGFPGLPG 718
Query: 264 DARPTGRRGDSRRPTTSVSAVTAALPGRPGDAAGVPGYPAG 386
P GR G R S A PG G + G PG PAG
Sbjct: 719 PPGPPGREGPPGRTGQKGSLGEAGAPGHKG-SKGAPG-PAG 757
>AL138752-6|CAI13878.1| 559|Homo sapiens WD repeat domain 32
protein.
Length = 559
Score = 31.9 bits (69), Expect = 2.5
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Frame = +3
Query: 222 PRSTLQPDT-RRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRP-GDAAGVPGYPAGPEP 395
P S L P HP + RR + + + + LPG P A PG P+ P P
Sbjct: 34 PPSPLHPGADATHPPPPARSPRRPGAPSLSPAPRSGELGLPGAPESSTASAPGEPSPPSP 93
Query: 396 ACR 404
CR
Sbjct: 94 PCR 96
>AK222605-1|BAD96325.1| 1188|Homo sapiens pumilio homolog 1 variant
protein.
Length = 1188
Score = 31.9 bits (69), Expect = 2.5
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +3
Query: 177 PISVRGQNPVRVGGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGD 356
P + +GQ V GG + L P+ + +G P + +AV +AL G
Sbjct: 494 PQAQQGQQQVLRGGASQRPLTPNQNQ----------QGQQTDPLVAAAAVNSALAFGQGL 543
Query: 357 AAGVPGYP 380
AAG+PGYP
Sbjct: 544 AAGMPGYP 551
>AF406780-1|AAN03620.1| 1626|Homo sapiens alpha 1 type XXII collagen
protein.
Length = 1626
Score = 31.9 bits (69), Expect = 2.5
Identities = 32/114 (28%), Positives = 44/114 (38%), Gaps = 3/114 (2%)
Frame = +3
Query: 57 RGRAGYVRLNDLQVLRADRGPKVI*GPPTKRLPXHSYTRRPISVRGQNPVRVGGFPRSTL 236
+G G + L L+ R ++G GPP +T P Q P G P
Sbjct: 821 QGEKGELGLPGLKGDRGEKGEAGPAGPPGLPGTTSLFTPHPRMPGEQGPKGEKGDPGLPG 880
Query: 237 QPDTRRHPEDARP---TGRRGDSRRPTTSVSAVTAALPGRPGDAAGVPGYPAGP 389
+P + P + P TG G + + A PG PG G PG P+GP
Sbjct: 881 EPGLQGRPGELGPQGPTGPPGAKGQEGAHGAPGAAGNPGAPGH-VGAPG-PSGP 932
>AF315592-1|AAG31807.1| 1186|Homo sapiens Pumilio 1 protein.
Length = 1186
Score = 31.9 bits (69), Expect = 2.5
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +3
Query: 177 PISVRGQNPVRVGGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGD 356
P + +GQ V GG + L P+ + +G P + +AV +AL G
Sbjct: 494 PQAQQGQQQVLRGGASQRPLTPNQNQ----------QGQQTDPLVAAAAVNSALAFGQGL 543
Query: 357 AAGVPGYP 380
AAG+PGYP
Sbjct: 544 AAGMPGYP 551
>AF163302-1|AAD45121.1| 2161|Homo sapiens somatostatin receptor
interacting protein splice variant a protein.
Length = 2161
Score = 31.9 bits (69), Expect = 2.5
Identities = 25/83 (30%), Positives = 30/83 (36%), Gaps = 4/83 (4%)
Frame = +3
Query: 138 PTKRLPXHSYTRRPISVRGQNPVRVGGFPRSTL--QPDTRRHPEDAR--PTGRRGDSRRP 305
PT S P + +R PR P RHPEDA+ P GR S P
Sbjct: 464 PTSGSQGQSQPSAPTTKLSSGTLRSASSPRGARARSPSRGRHPEDAKRQPRGRPSSSGTP 523
Query: 306 TTSVSAVTAALPGRPGDAAGVPG 374
+ T G PG + G G
Sbjct: 524 REGPAGGTGG-SGGPGGSLGSRG 545
>AF018082-1|AAC39659.1| 1336|Homo sapiens type XVIII collagen
protein.
Length = 1336
Score = 31.9 bits (69), Expect = 2.5
Identities = 33/101 (32%), Positives = 36/101 (35%), Gaps = 1/101 (0%)
Frame = +3
Query: 87 DLQVLRADRGPKVI*GPP-TKRLPXHSYTRRPISVRGQNPVRVGGFPRSTLQPDTRRHPE 263
DL+ LR RG GPP LP S P + G P P P
Sbjct: 479 DLEALRGPRGFPGPPGPPGVPGLPGEPGRFGVNSSDVPGPAGLPGVPGREGPPGFPGLPG 538
Query: 264 DARPTGRRGDSRRPTTSVSAVTAALPGRPGDAAGVPGYPAG 386
P GR G R S A PG G + G PG PAG
Sbjct: 539 PPGPPGREGPPGRTGQKGSLGEAGAPGHKG-SKGAPG-PAG 577
>AF018081-1|AAC39658.1| 1516|Homo sapiens type XVIII collagen
protein.
Length = 1516
Score = 31.9 bits (69), Expect = 2.5
Identities = 33/101 (32%), Positives = 36/101 (35%), Gaps = 1/101 (0%)
Frame = +3
Query: 87 DLQVLRADRGPKVI*GPP-TKRLPXHSYTRRPISVRGQNPVRVGGFPRSTLQPDTRRHPE 263
DL+ LR RG GPP LP S P + G P P P
Sbjct: 659 DLEALRGPRGFPGPPGPPGVPGLPGEPGRFGVNSSDVPGPAGLPGVPGREGPPGFPGLPG 718
Query: 264 DARPTGRRGDSRRPTTSVSAVTAALPGRPGDAAGVPGYPAG 386
P GR G R S A PG G + G PG PAG
Sbjct: 719 PPGPPGREGPPGRTGQKGSLGEAGAPGHKG-SKGAPG-PAG 757
>AK098358-1|BAC05291.1| 134|Homo sapiens protein ( Homo sapiens
cDNA FLJ25492 fis, clone CBR01389. ).
Length = 134
Score = 31.5 bits (68), Expect = 3.3
Identities = 20/56 (35%), Positives = 24/56 (42%)
Frame = +3
Query: 213 GGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGDAAGVPGYP 380
G P S L+ +R EDAR R DSR SV+ A P A +P P
Sbjct: 63 GDQPASILEAQIKRDREDARSQHRHVDSRSCCISVTLSPCAPEVIPDPTAALPSVP 118
>BC132918-1|AAI32919.1| 317|Homo sapiens similar to 4931415M17
protein protein.
Length = 317
Score = 31.1 bits (67), Expect = 4.3
Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +3
Query: 177 PISVRGQNPVRVGGFPRSTLQPD--TRRHPEDARPTGRRGDSR 299
P+ V Q P V PR L P T P P GR+GDSR
Sbjct: 106 PLEVDAQEPPGVENIPRQILLPAGFTPDTPHPPCPPGRKGDSR 148
>BC132916-1|AAI32917.1| 317|Homo sapiens similar to 4931415M17
protein protein.
Length = 317
Score = 31.1 bits (67), Expect = 4.3
Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +3
Query: 177 PISVRGQNPVRVGGFPRSTLQPD--TRRHPEDARPTGRRGDSR 299
P+ V Q P V PR L P T P P GR+GDSR
Sbjct: 106 PLEVDAQEPPGVENIPRQILLPAGFTPDTPHPPCPPGRKGDSR 148
>BC069238-1|AAH69238.1| 403|Homo sapiens zinc finger, CCHC domain
containing 3 protein.
Length = 403
Score = 31.1 bits (67), Expect = 4.3
Identities = 19/73 (26%), Positives = 25/73 (34%)
Frame = +3
Query: 192 GQNPVRVGGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGDAAGVP 371
G P G P+ + + + G RR +A A P RPG+A
Sbjct: 87 GDFPPAGRGDPKGRRRDPAGEAVDPRKKKGAAEAGRRKKAEAAAAAMATPARPGEAEDAA 146
Query: 372 GYPAGPEPACRVG 410
P EPA G
Sbjct: 147 ERPLQDEPAAAAG 159
>AK130938-1|BAC85467.1| 306|Homo sapiens protein ( Homo sapiens
cDNA FLJ27428 fis, clone WMD05691, highly similar to
Collagen alpha 2(XI) chain precursor. ).
Length = 306
Score = 31.1 bits (67), Expect = 4.3
Identities = 34/108 (31%), Positives = 45/108 (41%), Gaps = 2/108 (1%)
Frame = +3
Query: 36 SYEVP-APRGRAGYVRLNDLQVLRADRGPKVI*GPPTKRLPXHSYTRRPISVRGQNPVRV 212
++ VP AP+G DL RA GP+V GP R+P RR + +P
Sbjct: 8 AWMVPRAPKGAWDPRESQDLLDNRAPLGPRVFPGP---RVPSALMERRVLKGSQGSPA-C 63
Query: 213 GGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAV-TAALPGRPG 353
G P +QP + P+ R R D R A+ T PG PG
Sbjct: 64 PGPPGEVIQPLPIQMPKKTR---RSVDGSRLMQEDEAIPTGGAPGSPG 108
>AK097419-1|BAC05044.1| 271|Homo sapiens protein ( Homo sapiens
cDNA FLJ40100 fis, clone TESTI2004675. ).
Length = 271
Score = 31.1 bits (67), Expect = 4.3
Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +3
Query: 177 PISVRGQNPVRVGGFPRSTLQPD--TRRHPEDARPTGRRGDSR 299
P+ V Q P V PR L P T P P GR+GDSR
Sbjct: 106 PLEVDAQEPPGVENIPRQILLPAGFTPDTPHPPCPPGRKGDSR 148
>Z83131-1|CAI42019.1| 632|Homo sapiens armadillo repeat containing,
X-linked 2 protein.
Length = 632
Score = 30.7 bits (66), Expect = 5.7
Identities = 22/74 (29%), Positives = 26/74 (35%), Gaps = 3/74 (4%)
Frame = +3
Query: 201 PVRVGGFPRSTLQPDTRRHPEDARPTGRR---GDSRRPTTSVSAVTAALPGRPGDAAGVP 371
P +V P + P A PTG G + P TS S TA +PG P
Sbjct: 202 PTKVAEAPGVASPTEAAEAPVPATPTGAAAPTGAAESPGTSGSPRTAVVPGTSAAKKATP 261
Query: 372 GYPAGPEPACRVGT 413
G G P T
Sbjct: 262 GAHTGAIPKATSAT 275
>X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing
factor protein.
Length = 707
Score = 30.7 bits (66), Expect = 5.7
Identities = 24/83 (28%), Positives = 31/83 (37%), Gaps = 1/83 (1%)
Frame = +3
Query: 153 PXHSYTRRPISVRGQNPVR-VGGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVT 329
P + +P+ +G P VG P ++ P P G G PT AVT
Sbjct: 101 PPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGS-GPGPTPTPP-PAVT 158
Query: 330 AALPGRPGDAAGVPGYPAGPEPA 398
+A PG P G P P A
Sbjct: 159 SAPPGAPPPTPPSSGVPTTPPQA 181
>BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 30.7 bits (66), Expect = 5.7
Identities = 24/83 (28%), Positives = 31/83 (37%), Gaps = 1/83 (1%)
Frame = +3
Query: 153 PXHSYTRRPISVRGQNPVR-VGGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVT 329
P + +P+ +G P VG P ++ P P G G PT AVT
Sbjct: 101 PPPQDSSKPVVAQGPGPAPGVGSTPPASSSAPPATPPTSGAPPGS-GPGPTPTPP-PAVT 158
Query: 330 AALPGRPGDAAGVPGYPAGPEPA 398
+A PG P G P P A
Sbjct: 159 SAPPGAPPPTPPSSGVPTTPPQA 181
>BC045732-1|AAH45732.1| 209|Homo sapiens LOC339742 protein protein.
Length = 209
Score = 30.7 bits (66), Expect = 5.7
Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +3
Query: 216 GFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGR-PGDAAGVPGYP 380
G P S + +RRHP+ A P R SR S + P R P A PG P
Sbjct: 12 GGPSSLARTHSRRHPDHAPPPVRPSCSRPLCAGSSCLATPEPARSPSIAEPGPGIP 67
>BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein.
Length = 525
Score = 30.7 bits (66), Expect = 5.7
Identities = 24/83 (28%), Positives = 31/83 (37%), Gaps = 1/83 (1%)
Frame = +3
Query: 153 PXHSYTRRPISVRGQNPVR-VGGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVT 329
P + +P+ +G P VG P ++ P P G G PT AVT
Sbjct: 101 PPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGS-GPGPTPTPP-PAVT 158
Query: 330 AALPGRPGDAAGVPGYPAGPEPA 398
+A PG P G P P A
Sbjct: 159 SAPPGAPPPTPPSSGVPTTPPQA 181
>BC015926-1|AAH15926.1| 632|Homo sapiens ARMCX2 protein protein.
Length = 632
Score = 30.7 bits (66), Expect = 5.7
Identities = 22/74 (29%), Positives = 26/74 (35%), Gaps = 3/74 (4%)
Frame = +3
Query: 201 PVRVGGFPRSTLQPDTRRHPEDARPTGRR---GDSRRPTTSVSAVTAALPGRPGDAAGVP 371
P +V P + P A PTG G + P TS S TA +PG P
Sbjct: 202 PTKVAEAPGVASPTEAAEAPVPATPTGAAAPTGAAESPGTSGSPRTAVVPGTSAAKKATP 261
Query: 372 GYPAGPEPACRVGT 413
G G P T
Sbjct: 262 GAHTGAIPKATSAT 275
>BC012541-1|AAH12541.1| 632|Homo sapiens armadillo repeat
containing, X-linked 2 protein.
Length = 632
Score = 30.7 bits (66), Expect = 5.7
Identities = 22/74 (29%), Positives = 26/74 (35%), Gaps = 3/74 (4%)
Frame = +3
Query: 201 PVRVGGFPRSTLQPDTRRHPEDARPTGRR---GDSRRPTTSVSAVTAALPGRPGDAAGVP 371
P +V P + P A PTG G + P TS S TA +PG P
Sbjct: 202 PTKVAEAPGVASPTEAAEAPVPATPTGAAAPTGAAESPGTSGSPRTAVVPGTSAAKKATP 261
Query: 372 GYPAGPEPACRVGT 413
G G P T
Sbjct: 262 GAHTGAIPKATSAT 275
>BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein.
Length = 634
Score = 30.7 bits (66), Expect = 5.7
Identities = 24/83 (28%), Positives = 31/83 (37%), Gaps = 1/83 (1%)
Frame = +3
Query: 153 PXHSYTRRPISVRGQNPVR-VGGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVT 329
P + +P+ +G P VG P ++ P P G G PT AVT
Sbjct: 28 PPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGS-GPGPTPTPP-PAVT 85
Query: 330 AALPGRPGDAAGVPGYPAGPEPA 398
+A PG P G P P A
Sbjct: 86 SAPPGAPPPTPPSSGVPTTPPQA 108
>AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 30.7 bits (66), Expect = 5.7
Identities = 24/83 (28%), Positives = 31/83 (37%), Gaps = 1/83 (1%)
Frame = +3
Query: 153 PXHSYTRRPISVRGQNPVR-VGGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVT 329
P + +P+ +G P VG P ++ P P G G PT AVT
Sbjct: 101 PPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGS-GPGPTPTPP-PAVT 158
Query: 330 AALPGRPGDAAGVPGYPAGPEPA 398
+A PG P G P P A
Sbjct: 159 SAPPGAPPPTPPSSGVPTTPPQA 181
>AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1415
Score = 30.7 bits (66), Expect = 5.7
Identities = 31/121 (25%), Positives = 41/121 (33%), Gaps = 5/121 (4%)
Frame = +3
Query: 48 PAPRGRAGYVRLNDLQVLRADRGPKVI*GPPTKRLPXHSYTRRPISVRGQNPVRVGGFPR 227
P P G AG ++ L+ GP GPP +P R P P G
Sbjct: 838 PGPAGPAGLPGHQEVLNLQGPPGPPGPRGPPGPSIPGPPGPRGPPGEGLPGPPGPPGSFL 897
Query: 228 STLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGDA-----AGVPGYPAGPE 392
S + P P G +GD P + + P G + +G PG P P
Sbjct: 898 SNSETFLSGPPGPPGPPGPKGDQGDPGVPGALGIPSGPSEGGSSSTMYVSGPPGPPGPPG 957
Query: 393 P 395
P
Sbjct: 958 P 958
>AF104913-1|AAC82471.1| 1560|Homo sapiens eukaryotic protein
synthesis initiation factor protein.
Length = 1560
Score = 30.7 bits (66), Expect = 5.7
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3
Query: 303 PTTSVSAVTAALPGRPGDAAGVPGYPAGPE 392
P+++ S V +A P RPG AA V YPAG +
Sbjct: 19 PSSAASRVQSAAPARPGPAAHV--YPAGSQ 46
>AF002815-1|AAC78442.1| 230|Homo sapiens eucaryotic translation
initiation factor 4G isoform 1 protein.
Length = 230
Score = 30.7 bits (66), Expect = 5.7
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3
Query: 303 PTTSVSAVTAALPGRPGDAAGVPGYPAGPE 392
P+++ S V +A P RPG AA V YPAG +
Sbjct: 83 PSSAASRVQSAAPARPGPAAHV--YPAGSQ 110
>AB210013-1|BAE06095.1| 1624|Homo sapiens EIF4G1 variant protein
protein.
Length = 1624
Score = 30.7 bits (66), Expect = 5.7
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3
Query: 303 PTTSVSAVTAALPGRPGDAAGVPGYPAGPE 392
P+++ S V +A P RPG AA V YPAG +
Sbjct: 84 PSSAASRVQSAAPARPGPAAHV--YPAGSQ 111
>AB011084-1|BAA25438.2| 710|Homo sapiens KIAA0512 protein protein.
Length = 710
Score = 30.7 bits (66), Expect = 5.7
Identities = 22/74 (29%), Positives = 26/74 (35%), Gaps = 3/74 (4%)
Frame = +3
Query: 201 PVRVGGFPRSTLQPDTRRHPEDARPTGRR---GDSRRPTTSVSAVTAALPGRPGDAAGVP 371
P +V P + P A PTG G + P TS S TA +PG P
Sbjct: 280 PTKVAEAPGVASPTEAAEAPVPATPTGAAAPTGAAESPGTSGSPRTAVVPGTSAAKKATP 339
Query: 372 GYPAGPEPACRVGT 413
G G P T
Sbjct: 340 GAHTGAIPKATSAT 353
>AC073149-2|AAY24061.1| 365|Homo sapiens unknown protein.
Length = 365
Score = 30.3 bits (65), Expect = 7.6
Identities = 21/54 (38%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 252 RHPEDARPTGRRG-DSRRPTTSVSAVTAALPGRPGDAAGVPGYPAGPEPACRVG 410
R P G G D RR V + PGR GD G GYP GP P +G
Sbjct: 75 RGPSGPGCKGEPGLDGRRGVDGVPG-SPGPPGRKGDT-GEDGYPGGPGPPGPIG 126
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,214,454
Number of Sequences: 237096
Number of extensions: 2327085
Number of successful extensions: 8486
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 6796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8432
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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