Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_I18
(741 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF221108-1|AAF35862.1| 1403|Drosophila melanogaster La related p... 37 0.033
AE014297-4225|AAN14138.4| 1403|Drosophila melanogaster CG14066-P... 37 0.033
BT003322-1|AAO25082.1| 575|Drosophila melanogaster AT02511p pro... 33 0.31
AE013599-2343|AAS64829.1| 575|Drosophila melanogaster CG15920-P... 33 0.31
AE013599-2342|AAF57953.1| 620|Drosophila melanogaster CG15920-P... 33 0.31
AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA... 32 0.94
AY089617-1|AAL90355.1| 958|Drosophila melanogaster RE32881p pro... 29 6.6
AE014298-1748|AAF48140.5| 1040|Drosophila melanogaster CG32656-P... 29 6.6
AE014296-3128|AAF49173.1| 224|Drosophila melanogaster CG14089-P... 29 6.6
AE014297-1515|AAF54807.1| 2016|Drosophila melanogaster CG6525-PA... 29 8.8
>AF221108-1|AAF35862.1| 1403|Drosophila melanogaster La related
protein protein.
Length = 1403
Score = 36.7 bits (81), Expect = 0.033
Identities = 37/106 (34%), Positives = 42/106 (39%), Gaps = 5/106 (4%)
Frame = +3
Query: 117 PKVI*GPPTKRLPXH-SYTRRPISVRGQNPVRVGGFPRSTLQPDTRRHPEDARP---TGR 284
PK I G P +R + RRP V GG + P RHP +RP T
Sbjct: 280 PKPIGGRPNRRFSDDIADQRRPPRVYHDRQPGAGGAGVESRHPHAGRHPYGSRPATATSE 339
Query: 285 RGDSRRPTTSVSAVTAAL-PGRPGDAAGVPGYPAGPEPACRVGTRY 419
R DS R +S S TAA R G A G G A R RY
Sbjct: 340 RVDSWR--SSSSTTTAAFDEQRSGAAGGAGAAGTGVGSATRGPRRY 383
>AE014297-4225|AAN14138.4| 1403|Drosophila melanogaster CG14066-PC,
isoform C protein.
Length = 1403
Score = 36.7 bits (81), Expect = 0.033
Identities = 37/106 (34%), Positives = 42/106 (39%), Gaps = 5/106 (4%)
Frame = +3
Query: 117 PKVI*GPPTKRLPXH-SYTRRPISVRGQNPVRVGGFPRSTLQPDTRRHPEDARP---TGR 284
PK I G P +R + RRP V GG + P RHP +RP T
Sbjct: 280 PKPIGGRPNRRFSDDIADQRRPPRVYHDRQPGAGGAGVESRHPHAGRHPYGSRPATATSE 339
Query: 285 RGDSRRPTTSVSAVTAAL-PGRPGDAAGVPGYPAGPEPACRVGTRY 419
R DS R +S S TAA R G A G G A R RY
Sbjct: 340 RVDSWR--SSSSTTTAAFDEQRSGAAGGAGAAGTGVGSATRGPRRY 383
>BT003322-1|AAO25082.1| 575|Drosophila melanogaster AT02511p
protein.
Length = 575
Score = 33.5 bits (73), Expect = 0.31
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +3
Query: 273 PTGRRGDSRRPTTSVSAVTAALPGRPGDAAGVPGYPAGPEPACRVG 410
P G G+ RP++S A GRP D G PG G P+ G
Sbjct: 91 PGGGNGNGGRPSSSYGAPGGGNGGRPSDTYGAPGGGNGGRPSDTYG 136
Score = 32.3 bits (70), Expect = 0.71
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Frame = +3
Query: 192 GQNPVRVGGFPRSTL-QPDTRRHPEDA--RPTGRRGDSRRPTTSVSAVTAALPGRPGDAA 362
GQ GG P + P + P D+ P G+ RP++S A + GRP D+
Sbjct: 256 GQGQGGFGGRPSDSYGAPGQNQKPSDSYGAPGSGNGNGGRPSSSYGAPGSGPGGRPSDSY 315
Query: 363 GVPGYPAG 386
G P +G
Sbjct: 316 GPPASGSG 323
Score = 29.5 bits (63), Expect = 5.0
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +3
Query: 279 GRRGDSRRPTTSVSAVTAALPGRPGDAAGVPGYPAG 386
G+ G RP+ S A GRP D+ G PG G
Sbjct: 37 GQSGPGGRPSDSYGAPGGGNGGRPSDSYGAPGQGQG 72
>AE013599-2343|AAS64829.1| 575|Drosophila melanogaster CG15920-PB,
isoform B protein.
Length = 575
Score = 33.5 bits (73), Expect = 0.31
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +3
Query: 273 PTGRRGDSRRPTTSVSAVTAALPGRPGDAAGVPGYPAGPEPACRVG 410
P G G+ RP++S A GRP D G PG G P+ G
Sbjct: 91 PGGGNGNGGRPSSSYGAPGGGNGGRPSDTYGAPGGGNGGRPSDTYG 136
Score = 32.3 bits (70), Expect = 0.71
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Frame = +3
Query: 192 GQNPVRVGGFPRSTL-QPDTRRHPEDA--RPTGRRGDSRRPTTSVSAVTAALPGRPGDAA 362
GQ GG P + P + P D+ P G+ RP++S A + GRP D+
Sbjct: 256 GQGQGGFGGRPSDSYGAPGQNQKPSDSYGAPGSGNGNGGRPSSSYGAPGSGPGGRPSDSY 315
Query: 363 GVPGYPAG 386
G P +G
Sbjct: 316 GPPASGSG 323
Score = 29.5 bits (63), Expect = 5.0
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +3
Query: 279 GRRGDSRRPTTSVSAVTAALPGRPGDAAGVPGYPAG 386
G+ G RP+ S A GRP D+ G PG G
Sbjct: 37 GQSGPGGRPSDSYGAPGGGNGGRPSDSYGAPGQGQG 72
>AE013599-2342|AAF57953.1| 620|Drosophila melanogaster CG15920-PA,
isoform A protein.
Length = 620
Score = 33.5 bits (73), Expect = 0.31
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +3
Query: 273 PTGRRGDSRRPTTSVSAVTAALPGRPGDAAGVPGYPAGPEPACRVG 410
P G G+ RP++S A GRP D G PG G P+ G
Sbjct: 91 PGGGNGNGGRPSSSYGAPGGGNGGRPSDTYGAPGGGNGGRPSDTYG 136
Score = 32.3 bits (70), Expect = 0.71
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Frame = +3
Query: 192 GQNPVRVGGFPRSTL-QPDTRRHPEDA--RPTGRRGDSRRPTTSVSAVTAALPGRPGDAA 362
GQ GG P + P + P D+ P G+ RP++S A + GRP D+
Sbjct: 256 GQGQGGFGGRPSDSYGAPGQNQKPSDSYGAPGSGNGNGGRPSSSYGAPGSGPGGRPSDSY 315
Query: 363 GVPGYPAG 386
G P +G
Sbjct: 316 GPPASGSG 323
Score = 29.5 bits (63), Expect = 5.0
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +3
Query: 279 GRRGDSRRPTTSVSAVTAALPGRPGDAAGVPGYPAG 386
G+ G RP+ S A GRP D+ G PG G
Sbjct: 37 GQSGPGGRPSDSYGAPGGGNGGRPSDSYGAPGQGQG 72
>AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA
protein.
Length = 2284
Score = 31.9 bits (69), Expect = 0.94
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Frame = +3
Query: 222 PRSTLQPDTRRHPEDARPTGRRG-DSRRPTTSVSAVTAALPGRPGDAAGVPGYPAGPEPA 398
P + L P TRR P PT R + +P + P PG YP P+P+
Sbjct: 533 PATYLPPTTRRTPI---PTTRVPLTTSKPNCYPGSTDTRCPQAPGPRC----YPGSPDPS 585
Query: 399 CRVGTRYTADRVALPQ 446
C+ TR T PQ
Sbjct: 586 CQPPTRITQKPPTSPQ 601
Score = 29.5 bits (63), Expect = 5.0
Identities = 29/95 (30%), Positives = 36/95 (37%)
Frame = +3
Query: 132 GPPTKRLPXHSYTRRPISVRGQNPVRVGGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTT 311
G P R P TR+ G + R P + L P T R P+ TG D R P
Sbjct: 1860 GSPDPRCPKVPTTRKAGCSDGSDDPRCQ--PATYLPPSTTRAPKPNCYTGST-DPRCPQP 1916
Query: 312 SVSAVTAALPGRPGDAAGVPGYPAGPEPACRVGTR 416
+ A T P YP P+P C+ TR
Sbjct: 1917 T-QATTLRTP-----VTTTRCYPGSPDPDCQPATR 1945
>AY089617-1|AAL90355.1| 958|Drosophila melanogaster RE32881p
protein.
Length = 958
Score = 29.1 bits (62), Expect = 6.6
Identities = 22/57 (38%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +3
Query: 216 GFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGD-AAGVPGYPA 383
G TL DT P+ P G S P T TAA PG P D ++ PG PA
Sbjct: 265 GLVDPTLPADTTTAPDS--PV--EGSSAAPGTPADVTTAA-PGAPADGSSAAPGSPA 316
>AE014298-1748|AAF48140.5| 1040|Drosophila melanogaster CG32656-PA
protein.
Length = 1040
Score = 29.1 bits (62), Expect = 6.6
Identities = 22/57 (38%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +3
Query: 216 GFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGD-AAGVPGYPA 383
G TL DT P+ P G S P T TAA PG P D ++ PG PA
Sbjct: 265 GLVDPTLPADTTTAPDS--PV--EGSSAAPGTPADVTTAA-PGAPADGSSAAPGSPA 316
>AE014296-3128|AAF49173.1| 224|Drosophila melanogaster CG14089-PA
protein.
Length = 224
Score = 29.1 bits (62), Expect = 6.6
Identities = 20/60 (33%), Positives = 23/60 (38%)
Frame = +3
Query: 216 GFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGDAAGVPGYPAGPEP 395
G P P + D G RGD P +PG+PG G PGYP G P
Sbjct: 97 GQPGQKGYPGPKGSKGDPGEKGPRGDKGHPGMP------GIPGQPGPQ-GPPGYPGGSYP 149
>AE014297-1515|AAF54807.1| 2016|Drosophila melanogaster CG6525-PA
protein.
Length = 2016
Score = 28.7 bits (61), Expect = 8.8
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +3
Query: 261 EDARPTGRRGDSRRPTTSVSAVTAALPGRPGDAAGVPGYPAGPEP 395
+ A P +++RP T + + L RP DA VP P+ P P
Sbjct: 1739 QTAEPVPFYEEAQRPNTLLGIIVRCLSKRPADA--VPSTPSVPTP 1781
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,505,633
Number of Sequences: 53049
Number of extensions: 667084
Number of successful extensions: 2621
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2600
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3355404063
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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