Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_I18
         (741 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    24   1.7  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    24   1.7  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   4.0  
EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    22   7.0  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   9.2  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   9.2  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +1

Query: 142 LNDSPXTLTPGVRSPSGVKTRSE*GGSRGQHYNQTR 249
           L+D   TL PG+R+PS   T     G+   HY   R
Sbjct: 104 LHDHLGTLYPGMRAPSFRCTERPEDGALILHYYSDR 139


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +1

Query: 142 LNDSPXTLTPGVRSPSGVKTRSE*GGSRGQHYNQTR 249
           L+D   TL PG+R+PS   T     G+   HY   R
Sbjct: 104 LHDHLGTLYPGMRAPSFRCTERPEDGALILHYYSDR 139


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 13/40 (32%), Positives = 16/40 (40%)
 Frame = +3

Query: 300 RPTTSVSAVTAALPGRPGDAAGVPGYPAGPEPACRVGTRY 419
           RP   + + T  +PG      GV G P     A  V  RY
Sbjct: 523 RPRHEIRS-TDVIPGTQEHVCGVKGIPCSWGRAINVANRY 561


>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 92  QIVESHIPRAPP 57
           Q+  SHIP APP
Sbjct: 97  QVQGSHIPTAPP 108


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +3

Query: 366 VPGYPAGPEPACRVGTRY 419
           VP +  G     RVGTRY
Sbjct: 352 VPNWVMGNHDRVRVGTRY 369


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +1

Query: 544 LNPLRSPREHHGKENASHRG 603
           L P   P +HH  +   HRG
Sbjct: 312 LPPSYHPHQHHPSQYHPHRG 331


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,218
Number of Sequences: 438
Number of extensions: 3612
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)