Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_I14
         (837 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ098784-1|AAZ13714.1|  109|Homo sapiens immunoglobulin lambda l...    33   1.7  
AK125981-1|BAC86374.1|  143|Homo sapiens protein ( Homo sapiens ...    33   1.7  
U96114-1|AAC51325.1|  870|Homo sapiens WWP2 protein.                   32   3.0  
BC064531-1|AAH64531.1|  870|Homo sapiens WWP2 protein protein.         32   3.0  
BC013645-1|AAH13645.1|  870|Homo sapiens WW domain containing E3...    32   3.0  
BC000108-1|AAH00108.1|  335|Homo sapiens WW domain containing E3...    32   3.0  
AK092627-1|BAC03928.1|  235|Homo sapiens protein ( Homo sapiens ...    31   5.2  

>DQ098784-1|AAZ13714.1|  109|Homo sapiens immunoglobulin lambda
           light chain variable region protein.
          Length = 109

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 19/50 (38%), Positives = 23/50 (46%)
 Frame = -1

Query: 807 WHQNQPGLSKMX*QLRPIDANGGRRVPVGXLYKQSSFSEPSDRLETPSTL 658
           WHQ QPG  K    L  ++  G      G  Y+ S FS  +DR  T S L
Sbjct: 33  WHQQQPG--KAPRYLMKVEGTGNYSKGTGVPYRFSGFSSGADRYLTISNL 80


>AK125981-1|BAC86374.1|  143|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43993 fis, clone TESTI4020102. ).
          Length = 143

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
 Frame = +3

Query: 585 CYPSRGLGXSPEAGS--VPVSSMEVKTAWMAS----PGDLTVH*TSSAYIXLPPVHAYRH 746
           CY SRG+  S  A    +PVS   V  A + +    P  L  H  S  +I +PP HA  H
Sbjct: 51  CYCSRGVSLSVPASHACLPVSPALVHAAHIRTLVTPPFSLQPHLPSGIFISVPPAHANLH 110

Query: 747 L 749
           L
Sbjct: 111 L 111


>U96114-1|AAC51325.1|  870|Homo sapiens WWP2 protein.
          Length = 870

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 23/74 (31%), Positives = 30/74 (40%)
 Frame = +1

Query: 34  VSLGPSRDTLERPRPAARAHGAIVLAVGEQRLPEAAGIPDQK*APVVVGSRHRMRMILRQ 213
           +S+ P+ +T   P PA  A G      G Q+LP AA  PD   A          R+    
Sbjct: 261 LSVTPNPNTTSLPAPATPAEGEEPSTSGTQQLPAAAQAPDALPAGWEQRELPNGRVYYVD 320

Query: 214 HGFGQCVEQRPLVP 255
           H       +RPL P
Sbjct: 321 HNTKTTTWERPLPP 334


>BC064531-1|AAH64531.1|  870|Homo sapiens WWP2 protein protein.
          Length = 870

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 23/74 (31%), Positives = 30/74 (40%)
 Frame = +1

Query: 34  VSLGPSRDTLERPRPAARAHGAIVLAVGEQRLPEAAGIPDQK*APVVVGSRHRMRMILRQ 213
           +S+ P+ +T   P PA  A G      G Q+LP AA  PD   A          R+    
Sbjct: 261 LSVTPNPNTTSLPAPATPAEGEEPSTSGTQQLPAAAQAPDALPAGWEQRELPNGRVYYVD 320

Query: 214 HGFGQCVEQRPLVP 255
           H       +RPL P
Sbjct: 321 HNTKTTTWERPLPP 334


>BC013645-1|AAH13645.1|  870|Homo sapiens WW domain containing E3
           ubiquitin protein ligase 2 protein.
          Length = 870

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 23/74 (31%), Positives = 30/74 (40%)
 Frame = +1

Query: 34  VSLGPSRDTLERPRPAARAHGAIVLAVGEQRLPEAAGIPDQK*APVVVGSRHRMRMILRQ 213
           +S+ P+ +T   P PA  A G      G Q+LP AA  PD   A          R+    
Sbjct: 261 LSVTPNPNTTSLPAPATPAEGEEPSTSGTQQLPAAAQAPDALPAGWEQRELPNGRVYYVD 320

Query: 214 HGFGQCVEQRPLVP 255
           H       +RPL P
Sbjct: 321 HNTKTTTWERPLPP 334


>BC000108-1|AAH00108.1|  335|Homo sapiens WW domain containing E3
           ubiquitin protein ligase 2 protein.
          Length = 335

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 23/74 (31%), Positives = 30/74 (40%)
 Frame = +1

Query: 34  VSLGPSRDTLERPRPAARAHGAIVLAVGEQRLPEAAGIPDQK*APVVVGSRHRMRMILRQ 213
           +S+ P+ +T   P PA  A G      G Q+LP AA  PD   A          R+    
Sbjct: 261 LSVTPNPNTTSLPAPATPAEGEEPSTSGTQQLPAAAQAPDALPAGWEQRELPNGRVYYVD 320

Query: 214 HGFGQCVEQRPLVP 255
           H       +RPL P
Sbjct: 321 HNTKTTTWERPLPP 334


>AK092627-1|BAC03928.1|  235|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35308 fis, clone PROST2009909, weakly similar to
           ADAM 12 PRECURSOR (EC 3.4.24.-). ).
          Length = 235

 Score = 31.1 bits (67), Expect = 5.2
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = +1

Query: 553 PNGHSCFLCEIVIRPXXXXXVRRLDRSRCLLWRSKQRGWRLQ 678
           P G  C  C   +RP     +  L R  C +W +   GW+ Q
Sbjct: 145 PGGELCGRCSWKLRPGQRGPLPALCREGCPVWEAAVPGWKAQ 186


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,968,063
Number of Sequences: 237096
Number of extensions: 2571346
Number of successful extensions: 4939
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4939
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10538170902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)