Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_I09
(750 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1120 + 31037811-31038813,31038903-31038991,31039094-310391... 39 0.005
08_02_1159 + 24773328-24773994,24775430-24775558,24776080-247762... 38 0.009
04_01_0377 - 4970034-4970687 38 0.009
09_04_0477 - 17932797-17933974,17934454-17934612,17934693-17934957 36 0.045
03_05_1019 + 29736644-29736709,29737156-29737515,29737595-297377... 34 0.14
02_05_1205 + 34939062-34939919 34 0.14
01_01_0156 - 1364856-1365401 33 0.18
09_02_0533 - 10325681-10326211,10326260-10326328,10326758-103268... 33 0.32
03_05_0466 - 24602715-24603964,24605762-24605944,24606381-246072... 33 0.32
02_05_0108 + 25903545-25904292,25904888-25904989,25905220-25905263 31 0.74
01_01_0150 - 1344247-1345011 31 0.74
09_03_0111 - 12440818-12441129,12441242-12441585,12441663-124419... 31 1.3
01_01_0153 - 1352982-1353731 31 1.3
11_06_0629 + 25646268-25646591 30 2.3
10_08_0333 - 16850267-16851802 30 2.3
07_03_0894 + 22362717-22363514 30 2.3
04_04_0963 - 29743363-29744450,29744729-29745043,29745116-297454... 30 2.3
09_04_0472 - 17895285-17896459,17897113-17897271,17897374-178977... 29 3.9
02_04_0452 + 23044190-23045227 29 3.9
01_06_0661 - 30977760-30977783,30977944-30978014,30978045-30979464 29 3.9
01_01_0491 + 3629025-3629051,3629679-3629778,3629947-3630015,363... 29 3.9
07_01_0890 - 7437901-7439339,7439452-7439657,7439841-7440171,744... 29 5.2
04_04_1523 - 34148407-34150224 29 5.2
04_04_1046 + 30405805-30405858,30405991-30407950,30408460-30408476 29 5.2
04_03_0130 - 11622139-11623325,11626144-11627116 29 5.2
02_02_0030 - 6207784-6208154,6208286-6211310 29 5.2
11_06_0368 + 22756988-22758205 28 6.9
10_08_0608 + 19184722-19185224,19185331-19185410,19186048-191862... 28 6.9
10_01_0296 + 3069605-3070535,3071127-3071294,3075307-3076454 28 6.9
09_04_0479 - 17948043-17949037,17949554-17949715,17949809-179502... 28 6.9
04_03_0602 - 17884667-17885817,17885946-17886113,17886413-17887313 28 6.9
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204... 28 6.9
01_01_0151 - 1346942-1347682 28 6.9
10_02_0062 - 4814139-4814176,4814571-4815627 28 9.1
09_04_0473 - 17906802-17907964,17908175-17908871,17910323-17910784 28 9.1
04_04_0859 + 28805836-28805842,28806405-28806492,28807474-288075... 28 9.1
01_06_0188 - 27310814-27311138,27311197-27311547,27311682-273116... 28 9.1
>04_04_1120 +
31037811-31038813,31038903-31038991,31039094-31039163,
31039270-31039353,31039452-31039528,31039631-31039712,
31039847-31039929,31040270-31040333,31040435-31040566,
31040674-31040777,31040901-31040996,31041144-31041251
Length = 663
Score = 38.7 bits (86), Expect = 0.005
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
Frame = -1
Query: 570 AMSNGTCAPVCRRACTNGACSEPD--KCTCDDGYRLSPEDPFVCLPV--CSER--CVNSH 409
AM+NG C R T ACS+ D C C G++ D C V CSE+ C H
Sbjct: 476 AMNNGGCWKGTRDGKTFSACSDSDLSGCKCPPGFK---GDGLHCEDVDECSEKLACSCPH 532
Query: 408 CSSPNTCTCFKDYERNDTNSNVCYKKCDGAC 316
CS NT + ++ + +N+ Y K + C
Sbjct: 533 CSCKNT---WGSFDCSCHGNNLMYIKAEDTC 560
>08_02_1159 +
24773328-24773994,24775430-24775558,24776080-24776220,
24777393-24777487,24777545-24778606
Length = 697
Score = 37.9 bits (84), Expect = 0.009
Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Frame = -1
Query: 675 DSGYKNIDDVCVPQCLDCRNGECVAPN---DCLCHDNYAMSNGTCAPVCRRACTNGACSE 505
D G ++ID+ P C G+C DC CH Y N + C+ C+E
Sbjct: 218 DGGCRDIDECKSPHIYPCY-GDCKNTRGGYDCQCHHGYK-GNASILNGCQDI---NECAE 272
Query: 504 PDKCTCDDGYRLSPEDPFVC 445
P+K +C G ++ FVC
Sbjct: 273 PEKYSCYGGLCINTPGAFVC 292
Score = 33.1 bits (72), Expect = 0.24
Identities = 43/172 (25%), Positives = 61/172 (35%), Gaps = 12/172 (6%)
Frame = -1
Query: 639 PQCLDCRNGECVAPNDCLCHDNYAMSNGTCAPVCRRA---CT--NGACSEPD--KCTCDD 481
P+ L + N C + S + AP C A C NG ++ D +C C D
Sbjct: 150 PEALPAMLNWLILSNSSACSASTNASAPSSAPECCSANSFCKGYNGTTADYDGYRCYCSD 209
Query: 480 GYRLSPEDPFVCLPVCSERCVNSHCSSPNTCTCFKDYERNDTNSNV-CYK--KCDGACEN 310
GY +P C + C SP+ C+ D + + C+ K + + N
Sbjct: 210 GYEGNPYVDGGCRDI-------DECKSPHIYPCYGDCKNTRGGYDCQCHHGYKGNASILN 262
Query: 309 GRCSLDGACECDSGYILSNGTCIRNNTACSANCSAG--GEECGLGSGCPSEQ 160
G C C Y G CI A C G G+ G GC S +
Sbjct: 263 G-CQDINECAEPEKYSCYGGLCINTPGAFVCRCHDGSYGDPFTKG-GCRSSK 312
>04_01_0377 - 4970034-4970687
Length = 217
Score = 37.9 bits (84), Expect = 0.009
Identities = 48/191 (25%), Positives = 65/191 (34%), Gaps = 25/191 (13%)
Frame = -1
Query: 609 CVAPND-CLCHDNYAMSN-GTCA---PVCRRACTNGACSEPDKCTCDDGYRLSPEDPFV- 448
C ND +C N S G C C C +GAC +C G +
Sbjct: 21 CGKQNDGMICPHNLCCSQFGYCGLGRDYCGTGCQSGACCSSQRCGSQGGGATCSNNQCCS 80
Query: 447 ----C---LPVCSERCVNSHCSSPNTCTCFKDYERNDTNSNVCYKK----------CDGA 319
C C C N C + C ++ +N+C + C
Sbjct: 81 QYGYCGFGSEYCGSGCQNGPCRAD--IKCGRNANGELCPNNMCCSQWGYCGLGSEFCGNG 138
Query: 318 CENGRCSLDGACECDSGYILSNGTCIRNNTACSAN--CSAGGEECGLGSGCPSEQTHFPA 145
C++G C + C +G G NN CSA C GG CG SGC S +
Sbjct: 139 CQSGACCPEKRCGKQAG-----GDKCPNNFCCSAGGYCGLGGNYCG--SGCQSGGCYKGG 191
Query: 144 EVTSAGLAGLQ 112
+ +A LA Q
Sbjct: 192 DGMAAILANNQ 202
>09_04_0477 - 17932797-17933974,17934454-17934612,17934693-17934957
Length = 533
Score = 35.5 bits (78), Expect = 0.045
Identities = 23/64 (35%), Positives = 26/64 (40%)
Frame = -1
Query: 426 RCVNSHCSSPNTCTCFKDYERNDTNSNVCYKKCDGACENGRCSLDGACECDSGYILSNGT 247
RC SH N + N+ NV Y C G C N S C C G + NGT
Sbjct: 70 RCNCSHGYEGNPYIKDGCEDINECLDNVTYP-CPGICNNTMGSF--TCSCHQGNYMENGT 126
Query: 246 CIRN 235
CI N
Sbjct: 127 CIPN 130
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = -1
Query: 657 IDDVCVPQCLDCRNGECVAPNDCLCHDNYAMSNGTCAP 544
+D+V P C N + C CH M NGTC P
Sbjct: 94 LDNVTYPCPGICNN--TMGSFTCSCHQGNYMENGTCIP 129
>03_05_1019 +
29736644-29736709,29737156-29737515,29737595-29737735,
29737912-29738044,29738344-29738457,29738553-29738701,
29740815-29740907,29741019-29741079,29741180-29741512,
29742149-29742224,29742322-29742421,29743300-29743369,
29743987-29744082,29744355-29744402,29744427-29744658,
29745186-29745246,29745265-29745375
Length = 747
Score = 33.9 bits (74), Expect = 0.14
Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -1
Query: 342 CYKKCDGACENGRCSLDGACECDSGYILSNGTCIRNNTA-CSANCSAGGEEC 190
C KC G +G C +G CEC+SG+ T I +TA C CS G C
Sbjct: 568 CPAKCTG---HGICKANGICECESGW-----TGIDCSTAVCDEQCSLHGGVC 611
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 16/61 (26%)
Frame = -1
Query: 711 NGTCTEPGXCTWDSGYKNID---DVCVPQC-------------LDCRNGECVAPNDCLCH 580
+G C G C +SG+ ID VC QC C+ G + P+ +CH
Sbjct: 575 HGICKANGICECESGWTGIDCSTAVCDEQCSLHGGVCDNDYAGYTCQKGSAILPSLSMCH 634
Query: 579 D 577
D
Sbjct: 635 D 635
>02_05_1205 + 34939062-34939919
Length = 285
Score = 33.9 bits (74), Expect = 0.14
Identities = 26/79 (32%), Positives = 34/79 (43%)
Frame = +1
Query: 298 RAPAIFASSIAFLVTNVRIRIVTLVVFEARARIRG*TVRVHAALRTDRQADERILGTQPV 477
RAP F VT + +V+ V A + RG T R AAL+ R R G V
Sbjct: 102 RAPRRFGGDAVLGVTRI---VVSTFVGSASSSARGTTGRQVAALQLRRPRSLRPQGIVNV 158
Query: 478 AIVARALIGLRARPICAGP 534
A+ RA P+C+ P
Sbjct: 159 AVAVLDATDARAVPLCSSP 177
>01_01_0156 - 1364856-1365401
Length = 181
Score = 33.5 bits (73), Expect = 0.18
Identities = 33/117 (28%), Positives = 40/117 (34%), Gaps = 5/117 (4%)
Frame = -1
Query: 645 CVPQCLDCRNGECVAPNDCLCHDNY--AMSNGTCAP-VCRRACTNGAC--SEPDKCTCDD 481
CV QC C+ P +C D Y A C P CTN C S P C C+D
Sbjct: 79 CVAQCEVCQEAPGPFPGPLICSDVYWGADPGPFCTPRPWGDCCTNTTCTRSIPPICRCND 138
Query: 480 GYRLSPEDPFVCLPVCSERCVNSHCSSPNTCTCFKDYERNDTNSNVCYKKCDGACEN 310
+ C C + C S P C D + KC +CEN
Sbjct: 139 KVK-------KCAAACKD-CKRVKSSKPPRYVC------QDQFTGQPGPKCKHSCEN 181
>09_02_0533 -
10325681-10326211,10326260-10326328,10326758-10326855,
10326968-10327117,10327848-10327976,10328063-10328999
Length = 637
Score = 32.7 bits (71), Expect = 0.32
Identities = 26/81 (32%), Positives = 34/81 (41%), Gaps = 11/81 (13%)
Frame = -1
Query: 549 APVCRRACTNGACSEPD---KCTCDDGYRLSP------EDPFVCLPVCSERCVNSHCSSP 397
AP C A N C D KC C DGY+ +P D C C + ++P
Sbjct: 276 APDCLSA--NSFCHAYDLGYKCHCSDGYQGNPYIRGGCHDIDECKSPQDYSCYGNCNNTP 333
Query: 396 NT--CTCFKDYERNDTNSNVC 340
+ C C + YERN + N C
Sbjct: 334 GSHICDCPRGYERNASTPNGC 354
>03_05_0466 -
24602715-24603964,24605762-24605944,24606381-24607286,
24609446-24609516,24609737-24609846,24610073-24610108,
24610211-24610278,24610655-24610760,24610850-24610997,
24611091-24611218,24611319-24611454,24611924-24612072
Length = 1096
Score = 32.7 bits (71), Expect = 0.32
Identities = 23/88 (26%), Positives = 34/88 (38%), Gaps = 1/88 (1%)
Frame = -1
Query: 432 SERCVNSHCSSPNTCTCFKDYERNDTNSNVCYKKCDGACENGRCSL-DGACECDSGYILS 256
+ CVNS +C+C + YE N N C + C+L + + Y
Sbjct: 588 NSHCVNSSNGMGYSCSCNQGYEGNPYLDNGCQ-------DIDECTLRRQGRQYEDVYPCK 640
Query: 255 NGTCIRNNTACSANCSAGGEECGLGSGC 172
+G CI + C AG + G GC
Sbjct: 641 HGICINTPGSYRCKCKAGTKPDGTNFGC 668
>02_05_0108 + 25903545-25904292,25904888-25904989,25905220-25905263
Length = 297
Score = 31.5 bits (68), Expect = 0.74
Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 14/103 (13%)
Frame = -1
Query: 471 LSPEDPFVCLPVCSER----CVNSHCSSPNTCTCFKDYERND----TNSNVCYKKC---- 328
LSP D C+ R C N++ +S C+ Y+ D ++ Y+KC
Sbjct: 101 LSPGDCVACVRQTVARLGAVCANAYAASLQVDGCYVRYDAADFIGRADTTTAYRKCSSST 160
Query: 327 --DGACENGRCSLDGACECDSGYILSNGTCIRNNTACSANCSA 205
DGA + R + G + +GY LS ++ C + A
Sbjct: 161 SRDGAFLSSRDGVLGELQAAAGYKLSTSGTVQGVAQCLGDVPA 203
>01_01_0150 - 1344247-1345011
Length = 254
Score = 31.5 bits (68), Expect = 0.74
Identities = 21/70 (30%), Positives = 27/70 (38%), Gaps = 2/70 (2%)
Frame = -1
Query: 585 CHDNYAMSNGTCAPVCRRACTNGACSEPDKCTCDDGYRLSPEDPFVCLPVCSERCVNSHC 406
C D + G C C+ AC P CDD Y + PF + C N+ C
Sbjct: 142 CDDE--LKPGQCFAACK-ACREAPGPFPGPLICDDVYWGADPGPFCTPRPWGDCCDNTTC 198
Query: 405 --SSPNTCTC 382
S P C+C
Sbjct: 199 TKSIPPICSC 208
Score = 28.7 bits (61), Expect = 5.2
Identities = 22/77 (28%), Positives = 26/77 (33%), Gaps = 5/77 (6%)
Frame = -1
Query: 645 CVPQCLDCRNGECVAPNDCLCHDNY--AMSNGTCAP-VCRRACTNGACSE--PDKCTCDD 481
C C CR P +C D Y A C P C N C++ P C+C D
Sbjct: 151 CFAACKACREAPGPFPGPLICDDVYWGADPGPFCTPRPWGDCCDNTTCTKSIPPICSCGD 210
Query: 480 GYRLSPEDPFVCLPVCS 430
C PV S
Sbjct: 211 KVAACDGACKDCQPVAS 227
>09_03_0111 -
12440818-12441129,12441242-12441585,12441663-12441989,
12443444-12443602,12443687-12443784,12444745-12444821
Length = 438
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/64 (32%), Positives = 26/64 (40%)
Frame = -1
Query: 426 RCVNSHCSSPNTCTCFKDYERNDTNSNVCYKKCDGACENGRCSLDGACECDSGYILSNGT 247
RC SH N + N+ N Y C G C+N S D C C G + NG
Sbjct: 40 RCKCSHGYEGNPYIKDGCKDINECLDNATYP-CMGICKNTIGSFD--CSCYPGSYMKNGF 96
Query: 246 CIRN 235
C+ N
Sbjct: 97 CLPN 100
>01_01_0153 - 1352982-1353731
Length = 249
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/78 (25%), Positives = 30/78 (38%), Gaps = 2/78 (2%)
Frame = -1
Query: 600 PNDCLCHDNYAMSNGTCAPVCRRACTNGACSEPDKCTCDDGYRLSPEDPFVCLPVCSERC 421
P C+D S C C+ +C P K C+D Y + PF + C
Sbjct: 133 PPQWRCNDELEPSQ--CTAACK-SCREAPGPFPGKLICEDIYWGADPGPFCTPRPWGDCC 189
Query: 420 VNSHCS--SPNTCTCFKD 373
+ C+ +P TC C +
Sbjct: 190 DKAFCNKMNPPTCRCMDE 207
Score = 27.9 bits (59), Expect = 9.1
Identities = 20/78 (25%), Positives = 25/78 (32%), Gaps = 5/78 (6%)
Frame = -1
Query: 699 TEPGXCTWDSGYKNIDDVCVPQCLDCRNGECVAPNDCLCHDNY--AMSNGTCAP-VCRRA 529
T+P W + C C CR P +C D Y A C P
Sbjct: 129 TKPDPPQWRCNDELEPSQCTAACKSCREAPGPFPGKLICEDIYWGADPGPFCTPRPWGDC 188
Query: 528 CTNGACSE--PDKCTCDD 481
C C++ P C C D
Sbjct: 189 CDKAFCNKMNPPTCRCMD 206
>11_06_0629 + 25646268-25646591
Length = 107
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +3
Query: 408 SESSRSAQNRPAGRRKDPRDSTGSHRRTCTYRAPSTPHLCRPDGTQGR 551
+ESSR RP + R GSHR +R P L R +G +GR
Sbjct: 44 TESSRGRHRRPICGGRKARGGGGSHR----HRLLHPPDLAREEGEKGR 87
>10_08_0333 - 16850267-16851802
Length = 511
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = -1
Query: 573 YAMSNGTCAPVCRRACTNG--ACSEPDKCTCDDGY 475
Y+ ++G C P +CTN A E D TC+D Y
Sbjct: 416 YSHNSGLCGPPLNISCTNASVASDERDCRTCEDQY 450
>07_03_0894 + 22362717-22363514
Length = 265
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/67 (23%), Positives = 31/67 (46%)
Frame = +1
Query: 499 IGLRARPICAGPTAHRGARAVTHGVIVVTEAIIGSHALPVAAVQALRHAHVIDVLVXGVP 678
+ R +C AHR R ++ +T +++GSH +A A + A ++ +V +
Sbjct: 131 VNTRGAFLCLREAAHRLPRGGGGRIVAITSSVVGSHPTGYSAYTASKAA--VEAMVRTMA 188
Query: 679 RAXAGLR 699
+ G R
Sbjct: 189 KELKGTR 195
>04_04_0963 -
29743363-29744450,29744729-29745043,29745116-29745477,
29745947-29746013,29746111-29746954
Length = 891
Score = 29.9 bits (64), Expect = 2.3
Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Frame = -1
Query: 399 PNTCTCFKD-YERNDTNSNVCYKKCDGACENGRCSLDGACECDSGYILSNGTCIRNNTAC 223
PN C YE +D+ + + C NG SL A + + +NG N +
Sbjct: 744 PNDSNCESGKYENSDSLQDASPAELSEVCYNGNGSLQDASPAELSEVSNNG----NGSLQ 799
Query: 222 SANCSAGGEECGLGSG 175
A+ S E C G+G
Sbjct: 800 DASSSELSEVCNNGNG 815
>09_04_0472 -
17895285-17896459,17897113-17897271,17897374-17897794,
17898520-17898552,17898902-17899384
Length = 756
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/64 (29%), Positives = 27/64 (42%)
Frame = -1
Query: 426 RCVNSHCSSPNTCTCFKDYERNDTNSNVCYKKCDGACENGRCSLDGACECDSGYILSNGT 247
+C + + +P KD N+ N Y C G C+N + C C G + NG
Sbjct: 296 KCSDGYEGNPYVKDGCKDI--NECLDNATYP-CPGICKNTLGNF--TCSCYPGNYMMNGI 350
Query: 246 CIRN 235
CI N
Sbjct: 351 CIPN 354
>02_04_0452 + 23044190-23045227
Length = 345
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 224 HAVLFLMHVPLDSMYPESHSHAPSKEHRPFSQAPS 328
H L L H + SHSH+ S+ H P ++ P+
Sbjct: 166 HGCLLLHHAGHGHGHAHSHSHSHSRAHNPSTRPPT 200
>01_06_0661 - 30977760-30977783,30977944-30978014,30978045-30979464
Length = 504
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = -2
Query: 653 MTCACLSAWTAATGSAWLPMIASVTTITP*VTARAPLCAVGPAQMG 516
+ AC S TA++ P + VTT+T +ARA + GP+Q+G
Sbjct: 30 LRAACFSRPTASS-----PALHPVTTVTNRASARAAVSPGGPSQLG 70
>01_01_0491 +
3629025-3629051,3629679-3629778,3629947-3630015,
3630282-3630559
Length = 157
Score = 29.1 bits (62), Expect = 3.9
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1
Query: 429 ERCVNSHCSSPNTCTCFKDYER 364
ERC++S S C CFK +R
Sbjct: 17 ERCISSQAESDGYCACFKGLQR 38
>07_01_0890 - 7437901-7439339,7439452-7439657,7439841-7440171,
7440268-7440405,7440619-7440874,7440963-7441318,
7441421-7441709
Length = 1004
Score = 28.7 bits (61), Expect = 5.2
Identities = 22/56 (39%), Positives = 23/56 (41%), Gaps = 7/56 (12%)
Frame = -1
Query: 747 PXEGS-PRGERWXNGT---CTE---PGXCTWDSGYKNIDDVCVPQCLDCRNGECVA 601
P EGS GE NG CT P C D G + D DCRNG C A
Sbjct: 941 PAEGSCSGGEGGTNGVGRCCTSVKRPTCC--DMGAAEVSDSSPETAKDCRNGRCCA 994
>04_04_1523 - 34148407-34150224
Length = 605
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -1
Query: 420 VNSHCSSPNTCTCFKDYERNDTNSNVCYKKCDGAC 316
+N CS+P C KD+E D + V C +C
Sbjct: 97 INRSCSTPCLCPVSKDFEHKDRSGLVEMLGCSISC 131
>04_04_1046 + 30405805-30405858,30405991-30407950,30408460-30408476
Length = 676
Score = 28.7 bits (61), Expect = 5.2
Identities = 21/76 (27%), Positives = 32/76 (42%)
Frame = +3
Query: 405 NSESSRSAQNRPAGRRKDPRDSTGSHRRTCTYRAPSTPHLCRPDGTQGRTCRYSWRNCRD 584
+ +++ + RP+ + PR + + TY + S P T G T SW RD
Sbjct: 429 DDDAASVSMGRPS---RPPRRALNRINSSSTYSSSSCPPE-PTSSTSGSTS--SWVPPRD 482
Query: 585 RGNHWEPRTPRCGSPS 632
+ W P PR PS
Sbjct: 483 NASSWAPPPPRGNPPS 498
>04_03_0130 - 11622139-11623325,11626144-11627116
Length = 719
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 4/30 (13%)
Frame = -1
Query: 495 CTCDDGYR----LSPEDPFVCLPVCSERCV 418
C C G+R L PEDP C +CS V
Sbjct: 303 CNCSKGFRGNPYLHPEDPSSCQGICSSTVV 332
>02_02_0030 - 6207784-6208154,6208286-6211310
Length = 1131
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = -1
Query: 525 TNGACSEPDKCTCDDGYRLSPEDPFVCLPVCSE 427
+NG + D YRL DP LP+C E
Sbjct: 725 SNGVFGNASRAILDGNYRLCVNDPGYSLPLCRE 757
>11_06_0368 + 22756988-22758205
Length = 405
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = -1
Query: 510 SEPDKCTCDDGYRLSPEDPFVCLPVCSERCVNSH-CSSP 397
S P++ Y P DP C CS CV H C SP
Sbjct: 35 SAPERDQTAAPYGTVPPDPLSCATDCSPDCVFYHLCPSP 73
>10_08_0608 + 19184722-19185224,19185331-19185410,19186048-19186235,
19187021-19187927,19188015-19188142,19189270-19189356,
19189422-19189472,19189582-19189668,19189746-19189873,
19190469-19190608,19190721-19190882,19190964-19192733,
19192807-19192922,19193077-19193227,19193243-19193371,
19193598-19194139
Length = 1722
Score = 28.3 bits (60), Expect = 6.9
Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 6/69 (8%)
Frame = +3
Query: 450 RKDPRDSTGS--HRRTCTYRAPSTPHLCRPDGTQG----RTCRYSWRNCRDRGNHWEPRT 611
+KDP+ G H+ + PS+ RP G+ R W N +D G W P T
Sbjct: 970 QKDPQMLHGQAQHQGDYSCTIPSSVVSYRPAGSHDEWPPRGNIGEWNNSQDSGGMWSPTT 1029
Query: 612 PRCGSPSTE 638
P + E
Sbjct: 1030 PHMSRSNLE 1038
>10_01_0296 + 3069605-3070535,3071127-3071294,3075307-3076454
Length = 748
Score = 28.3 bits (60), Expect = 6.9
Identities = 27/95 (28%), Positives = 36/95 (37%), Gaps = 10/95 (10%)
Frame = -1
Query: 519 GACSEPDKCTCDDGYRLSPEDPFVCLPVCSERCVNSHCSSPNTCTCFKDYERND------ 358
G S C + P + + C+ SE CVNS C C K YE N
Sbjct: 252 GNSSASSSCPAPEVREKMPPE-YACVSDNSE-CVNSTNGPGYYCKCSKGYEGNPYLVGGC 309
Query: 357 TNSNVCYKK----CDGACENGRCSLDGACECDSGY 265
+ + C + C G C N D C+C +GY
Sbjct: 310 NDIDECARSDEYPCHGDCRN--TVGDYHCKCRTGY 342
>09_04_0479 -
17948043-17949037,17949554-17949715,17949809-17950262,
17952895-17953326
Length = 680
Score = 28.3 bits (60), Expect = 6.9
Identities = 29/112 (25%), Positives = 47/112 (41%)
Frame = -1
Query: 576 NYAMSNGTCAPVCRRACTNGACSEPDKCTCDDGYRLSPEDPFVCLPVCSERCVNSHCSSP 397
++A+++ TC RR T+ AC + C D L+ + C +C N + +P
Sbjct: 239 DWAITSKTCTE-SRRNKTSYACIS-NNSQCIDN--LTNAQGYRC------KCSNGYEGNP 288
Query: 396 NTCTCFKDYERNDTNSNVCYKKCDGACENGRCSLDGACECDSGYILSNGTCI 241
KD + + +N Y C G C N + C C G + NG C+
Sbjct: 289 YIKDGCKDID--ECLNNATYP-CKGICTNTLGNF--TCSCSPGSYMMNGDCM 335
>04_03_0602 - 17884667-17885817,17885946-17886113,17886413-17887313
Length = 739
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -1
Query: 492 TCDDGYRLSPEDPFVCLPVCSERCVNSHCSSPNTCTCFKDYERN 361
+C++ ++ D + C SE C NS TC C K YE N
Sbjct: 250 SCEEAWKKM--DSYACKSTNSE-CFNSTNGPGYTCNCSKGYEGN 290
>01_05_0292 +
20518668-20519090,20519213-20519281,20520204-20520473,
20520734-20521084,20521251-20521528,20522755-20523099,
20523346-20523911,20525155-20525528
Length = 891
Score = 28.3 bits (60), Expect = 6.9
Identities = 23/70 (32%), Positives = 33/70 (47%)
Frame = +3
Query: 270 RSRTRTLRPKSTGHFRKLHRISCNKRSNSYRYARSL*STCTY*GMNSESSRSAQNRPAGR 449
RSR+R+ R S + R R + RS + +RS + T N +SRS P
Sbjct: 595 RSRSRS-RSDSDRYSRSPKRSRRHSRSRTRSRSRSRSRSYT---RNRRASRSRSRSPGAS 650
Query: 450 RKDPRDSTGS 479
R+ R +TGS
Sbjct: 651 RRHERSATGS 660
>01_01_0151 - 1346942-1347682
Length = 246
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/60 (28%), Positives = 21/60 (35%), Gaps = 5/60 (8%)
Frame = -1
Query: 645 CVPQCLDCRNGECVAPNDCLCHDNY--AMSNGTCAP-VCRRACTNGACSE--PDKCTCDD 481
C C CR P +C D Y A C P + C C++ P C C D
Sbjct: 144 CTAACKSCREAPGPFPGPLICEDVYWGADPGPLCTPRPWGKCCDKAFCNKMNPPTCRCMD 203
>10_02_0062 - 4814139-4814176,4814571-4815627
Length = 364
Score = 27.9 bits (59), Expect = 9.1
Identities = 21/68 (30%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Frame = -1
Query: 642 VPQCLD--CRNGECVAPNDCLCHDNYAMSNGTCAPVCRRACTNGACSEPDKCTCDDGYRL 469
VP LD RNG C N +YA +G + C + KC C +GY
Sbjct: 290 VPLVLDFAIRNGSCPQENRGPPGKDYACVSGNSS------CLDAGKGRGYKCECKEGYNG 343
Query: 468 SPEDPFVC 445
+P P C
Sbjct: 344 NPYMPNGC 351
>09_04_0473 - 17906802-17907964,17908175-17908871,17910323-17910784
Length = 773
Score = 27.9 bits (59), Expect = 9.1
Identities = 28/111 (25%), Positives = 43/111 (38%), Gaps = 10/111 (9%)
Frame = -1
Query: 528 CTNGACSEPDKCTCDDGYRLSP------EDPF----VCLPVCSERCVNSHCSSPNTCTCF 379
C + +C C DGY+ +P E PF + LP+ +RC S F
Sbjct: 280 CVDATNGRGYRCKCSDGYKGNPYITDGCEGPFPAILIPLPLQIKRCRKS--------IIF 331
Query: 378 KDYERNDTNSNVCYKKCDGACENGRCSLDGACECDSGYILSNGTCIRNNTA 226
D + C G C N + S C C G L +G C +++++
Sbjct: 332 LSLFLADIDECQDAHPCTGICINTQGSY--TCTCQRGKHLIDGVCKQSSSS 380
>04_04_0859 + 28805836-28805842,28806405-28806492,28807474-28807558,
28807638-28807763,28807819-28807968,28808497-28808541,
28808612-28808875,28809843-28809887,28810395-28810430,
28812048-28812816,28813063-28813925,28814024-28814182,
28814440-28814558,28815356-28815417,28816677-28816805,
28817395-28817460,28817757-28817890,28818025-28818162,
28818630-28818889,28818996-28819107,28819590-28819675,
28820655-28820735,28822841-28822928,28823222-28823260,
28823847-28823964,28824063-28824130,28824884-28824981,
28825238-28825397,28825691-28825816,28825876-28825945,
28826046-28826449
Length = 1664
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -1
Query: 384 CFKDYERNDTNSNVCYKKCDGACENGRCSL 295
CF +DT ++ Y K G C G C +
Sbjct: 1231 CFIVLRNDDTTADFSYNKFQGVCSRGGCGV 1260
>01_06_0188 -
27310814-27311138,27311197-27311547,27311682-27311693,
27313598-27313662,27314945-27314968
Length = 258
Score = 27.9 bits (59), Expect = 9.1
Identities = 22/69 (31%), Positives = 26/69 (37%)
Frame = +3
Query: 282 RTLRPKSTGHFRKLHRISCNKRSNSYRYARSL*STCTY*GMNSESSRSAQNRPAGRRKDP 461
R LR K GH+RK R S S R+ R Y G + S R G +
Sbjct: 156 RDLRKKLFGHYRKPQRGRSRSPSPSPRHRRERHDRDDYRGRDDYS--GGGGRRGGSSRHE 213
Query: 462 RDSTGSHRR 488
R G RR
Sbjct: 214 RHDDGGRRR 222
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,654,900
Number of Sequences: 37544
Number of extensions: 528988
Number of successful extensions: 1903
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1896
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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