Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_T7_I08
(803 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.42
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.42
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.42
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 32 0.55
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 2.9
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 25 4.5
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 28 6.8
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 28 6.8
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 28 6.8
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 28 6.8
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 28 9.0
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 28 9.0
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 28 9.0
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.42
Identities = 18/61 (29%), Positives = 18/61 (29%)
Frame = -2
Query: 679 PPPXXXXPPPKKRPXPXXGGGGGPXXXXXXXXXXXXXPFXXFXXXXXXXXXXPGGKPPPP 500
PPP PP P P GG P PGG PPPP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 499 P 497
P
Sbjct: 773 P 773
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.42
Identities = 18/61 (29%), Positives = 18/61 (29%)
Frame = -2
Query: 679 PPPXXXXPPPKKRPXPXXGGGGGPXXXXXXXXXXXXXPFXXFXXXXXXXXXXPGGKPPPP 500
PPP PP P P GG P PGG PPPP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 499 P 497
P
Sbjct: 773 P 773
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.3 bits (70), Expect = 0.42
Identities = 18/61 (29%), Positives = 18/61 (29%)
Frame = -2
Query: 679 PPPXXXXPPPKKRPXPXXGGGGGPXXXXXXXXXXXXXPFXXFXXXXXXXXXXPGGKPPPP 500
PPP PP P P GG P PGG PPPP
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Query: 499 P 497
P
Sbjct: 356 P 356
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.9 bits (69), Expect = 0.55
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +3
Query: 612 PPPPPXXGXGLFFGGGXXXXGGG 680
PPPPP G G GGG GGG
Sbjct: 55 PPPPPACGGGCGGGGGGCGGGGG 77
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +3
Query: 612 PPPPPXXGXGLFFGGGXXXXGGG 680
PPPPP G G GGG GGG
Sbjct: 112 PPPPPACGGGC--GGGGGGCGGG 132
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = -1
Query: 605 PXXGXGGXPPPPPLXFXFXXXXXXXXXPRG*TPPPP 498
P G GG PPPPP+ F G PPPP
Sbjct: 76 PPPGPGGIPPPPPM---FAGGIPPPPPMMGGIPPPP 108
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/43 (34%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Frame = -1
Query: 590 GGXPPPPPLXFXFXXXXXXXXX--PRG*TPPPPQXXXXXLISG 468
GG PPPPPL P G PPPP + +G
Sbjct: 549 GGPPPPPPLPLDLLKGAVAGLKSVPGGPPPPPPPPPPSFMFNG 591
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 25.4 bits (53), Expect(2) = 4.5
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -2
Query: 688 FXXPPPXXXXPPPKKRP 638
F PPP PPP +RP
Sbjct: 53 FGPPPPWDRPPPPWRRP 69
Score = 21.8 bits (44), Expect(2) = 4.5
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -2
Query: 523 PGGKPPPPP 497
P G PPPPP
Sbjct: 76 PWGLPPPPP 84
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.3 bits (60), Expect = 6.8
Identities = 19/55 (34%), Positives = 21/55 (38%), Gaps = 7/55 (12%)
Frame = -1
Query: 596 GXGGXPPPPPLXFXFXXXXXXXXXPR------G*TPPPPQXXXXXLISG-GFLKP 453
G GG PPPPP + PR G PPPP SG G + P
Sbjct: 329 GMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPP 383
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.3 bits (60), Expect = 6.8
Identities = 19/55 (34%), Positives = 21/55 (38%), Gaps = 7/55 (12%)
Frame = -1
Query: 596 GXGGXPPPPPLXFXFXXXXXXXXXPR------G*TPPPPQXXXXXLISG-GFLKP 453
G GG PPPPP + PR G PPPP SG G + P
Sbjct: 339 GMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPP 393
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -2
Query: 679 PPPXXXXPPPKKRPXPXXGGGGG 611
PPP PPP + GGGGG
Sbjct: 1324 PPPMIRGPPPDQMYRDRSGGGGG 1346
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -2
Query: 679 PPPXXXXPPPKKRPXPXXGGGGG 611
PPP PPP + GGGGG
Sbjct: 1324 PPPMIRGPPPDQMYRDRSGGGGG 1346
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 679 PPPXXXXPPPKKRPXPXXGGGGGP 608
PPP PPP P P G G P
Sbjct: 94 PPPIGMPPPPLGMPPPHIGLGAAP 117
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 679 PPPXXXXPPPKKRPXPXXGGGGGP 608
PPP PPP P P G G P
Sbjct: 117 PPPIGMPPPPLGMPPPHIGLGAAP 140
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 679 PPPXXXXPPPKKRPXPXXGGGGGP 608
PPP PPP P P G G P
Sbjct: 367 PPPIGMPPPPLGMPPPHIGLGAAP 390
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,539,850
Number of Sequences: 27780
Number of extensions: 284535
Number of successful extensions: 1005
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 877
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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