Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_T7_I07
         (728 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1055 - 33798162-33798290,33798417-33798604,33798707-337987...    46   3e-05
06_03_1144 - 27980216-27980896,27981682-27982048,27983499-279836...    29   3.8  
03_06_0638 + 35222994-35223265,35223521-35223610,35224189-352243...    29   5.0  
08_02_0685 + 20039318-20040433,20040574-20040982,20042906-200429...    28   6.6  

>02_05_1055 -
           33798162-33798290,33798417-33798604,33798707-33798767,
           33799045-33799122,33799250-33799472,33799599-33799824,
           33799922-33800116,33800210-33800627,33800904-33801182
          Length = 598

 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
 Frame = -3

Query: 564 TPTNIMXVR*XIEEACNVXKEX-DIPEPCIIXGEELRARGMGGLYGVGRAASCPPALVTL 388
           +P N++      EEA N+     D+    I+  E+ +   MG   GV  A++ PP  + L
Sbjct: 290 SPANVLTPAVLAEEASNIASTYSDVFTATILDVEKCKELKMGSYLGVAAASANPPHFIHL 349

Query: 387 SYXXXXXA--RTVAWVGKGIVXDTGGLSIK 304
            Y        R +A VGKG+  D+GG +IK
Sbjct: 350 CYKPPGGNAKRKLAIVGKGLTFDSGGYNIK 379


>06_03_1144 -
           27980216-27980896,27981682-27982048,27983499-27983644,
           27983872-27984111
          Length = 477

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -2

Query: 268 FFPTLLRALRGYIMMMILIYP*WERQRTLVHTARSC 161
           F+   LR + GY+  +  +YP W R R   H   SC
Sbjct: 213 FWDPQLRLVAGYVDGLAAMYPFWNRSRGADHFLVSC 248


>03_06_0638 +
           35222994-35223265,35223521-35223610,35224189-35224349,
           35224701-35224770,35224871-35224925,35225413-35225496,
           35225960-35225998,35226503-35226549,35226723-35226834
          Length = 309

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 14/24 (58%), Positives = 15/24 (62%)
 Frame = -2

Query: 355 GLGREGHRVXHRRPQHQGEGAHRQ 284
           GLGR    V HRR   QG+GA RQ
Sbjct: 51  GLGRVLRGVGHRRGDGQGQGAGRQ 74


>08_02_0685 +
           20039318-20040433,20040574-20040982,20042906-20042973,
           20043336-20043518,20043641-20043964,20045653-20045694
          Length = 713

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = +1

Query: 313 EAAGVXHDALPDP 351
           EAAGV HD LPDP
Sbjct: 372 EAAGVTHDVLPDP 384


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,086,764
Number of Sequences: 37544
Number of extensions: 242813
Number of successful extensions: 515
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 515
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)